Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_013913 Vanilla planifolia HOM05D006918 ORTHO05D008525 8.9e-80 301.6 397 100.0
HPP92_013983 Vanilla planifolia HOM05D006918 ORTHO05D008525 4.4e-71 272.7 386 99.2
Nn7g37872 Nelumbo nucifera HOM05D006918 ORTHO05D008525 3.0e-19 100.5 120 44.2
Lj3g0009186 Lotus japonicus HOM05D006918 ORTHO05D008525 2.4e-16 90.9 123 43.1
CsaV3_4G031810 Cucumis sativus L. HOM05D006918 ORTHO05D008525 4.1e-16 90.1 119 40.3
MD10G1198700 Malus domestica HOM05D006918 ORTHO05D008525 4.1e-16 90.1 120 41.7
Prupe.4G143000 Prunus persica HOM05D006918 ORTHO05D008525 5.3e-16 89.7 120 41.7
Aqoxy6G01201 Aquilegia oxysepala HOM05D006918 ORTHO05D008525 9.1e-16 89.0 84 48.8
CSS0032788 Camellia sinensis var. sinensis HOM05D006918 ORTHO05D008525 1.2e-15 88.6 119 39.5
QL04p074473 Quercus lobata HOM05D006918 ORTHO05D008525 1.5e-15 88.2 124 42.7
CSS0011318 Camellia sinensis var. sinensis HOM05D006918 ORTHO05D008525 2.0e-15 87.8 120 39.2
CiPaw.12G045100 Carya illinoinensis HOM05D006918 ORTHO05D008525 2.0e-15 87.8 121 40.5
CSS0007445 Camellia sinensis var. sinensis HOM05D006918 ORTHO05D008525 2.6e-15 87.4 120 38.3
Sed0019951 Sechium edule HOM05D006918 ORTHO05D008525 2.6e-15 87.4 120 39.2
Dinv19625 Davidia involucrata HOM05D006918 ORTHO05D008525 3.5e-15 87.0 119 40.3
Glyma.08G172400 Glycine max HOM05D006918 ORTHO05D008525 3.5e-15 87.0 123 39.0
ClCG11G016340 Citrullus lanatus HOM05D006918 ORTHO05D008525 4.5e-15 86.7 120 40.0
Glyma.15G254900 Glycine max HOM05D006918 ORTHO05D008525 4.5e-15 86.7 123 41.5
TAR627G0890 Trochodendron aralioides HOM05D006918 ORTHO05D008525 5.9e-15 86.3 112 41.1
CANSAT56G0998 Cannabis sativa HOM05D006918 ORTHO05D008525 7.7e-15 85.9 119 42.0
Cfa019430 Carpinus fangiana HOM05D006918 ORTHO05D008525 7.7e-15 85.9 120 40.8
Haze_08532 Corylus avellana HOM05D006918 ORTHO05D008525 7.7e-15 85.9 120 40.8
MELO3C010560.2 Cucumis melo HOM05D006918 ORTHO05D008525 7.7e-15 85.9 119 38.7
PSO541G4556 Papaver somniferum HOM05D006918 ORTHO05D008525 7.7e-15 85.9 116 38.8
PSO675G9078 Papaver somniferum HOM05D006918 ORTHO05D008525 7.7e-15 85.9 116 38.8
Thecc.07G154400 Theobroma cacao HOM05D006918 ORTHO05D008525 1.0e-14 85.5 120 37.5
Sc03g0007940 Simmondsia chinensis HOM05D006918 ORTHO05D008525 1.3e-14 85.1 120 38.3
RcHm_v2.0_Chr5g0026921 Rosa chinensis HOM05D006918 ORTHO05D008525 1.7e-14 84.7 122 41.0
FAN21G2086 Fragaria x ananassa HOM05D006918 ORTHO05D008525 2.2e-14 84.3 121 41.3
FAN21G2559 Fragaria x ananassa HOM05D006918 ORTHO05D008525 2.2e-14 84.3 121 41.3
Gohir.D05G330400 Gossypium hirsutum HOM05D006918 ORTHO05D008525 2.2e-14 84.3 122 36.9
Gorai.009G354800 Gossypium raimondii HOM05D006918 ORTHO05D008525 2.2e-14 84.3 122 36.9
Lalb_Chr25g0285091 Lupinus albus HOM05D006918 ORTHO05D008525 3.8e-14 83.6 119 37.8
MD05G1216400 Malus domestica HOM05D006918 ORTHO05D008525 3.8e-14 83.6 120 39.2
Ca_03688_v3 Cicer arietinum L. HOM05D006918 ORTHO05D008525 8.5e-14 82.4 83 48.2
FvH4_3g15990 Fragaria vesca HOM05D006918 ORTHO05D008525 8.5e-14 82.4 121 40.5
FAN11G3197 Fragaria x ananassa HOM05D006918 ORTHO05D008525 8.5e-14 82.4 121 40.5
FAN25G3485 Fragaria x ananassa HOM05D006918 ORTHO05D008525 1.1e-13 82.0 122 40.2
TAR636G1403 Trochodendron aralioides HOM05D006918 ORTHO05D008525 1.1e-13 82.0 85 44.7
DCAR_016820 Daucus carota HOM05D006918 ORTHO05D008525 1.5e-13 81.6 119 37.0
Lsat_1_v5_gn_7_72161 Lactuca sativa HOM05D006918 ORTHO05D008525 1.9e-13 81.3 117 38.5
Lj5C202T5 Lonicera japonica HOM05D006918 ORTHO05D008525 1.9e-13 81.3 126 38.9
Cc05_g15990 Coffea canephora HOM05D006918 ORTHO05D008525 2.5e-13 80.9 122 38.5
Atru.chr12.2189 Acer truncatum HOM05D006918 ORTHO05D008525 3.2e-13 80.5 119 38.7
Duzib187G0932 Durio zibethinus HOM05D006918 ORTHO05D008525 3.2e-13 80.5 121 36.4
Duzib187G1351 Durio zibethinus HOM05D006918 ORTHO05D008525 3.2e-13 80.5 121 36.4
Migut.M01563 Erythranthe guttata HOM05D006918 ORTHO05D008525 5.5e-13 79.7 80 46.2
Sabra11G0128500 Salix brachista HOM05D006918 ORTHO05D008525 5.5e-13 79.7 120 35.8
TPR.G9735 Trifolium pratense HOM05D006918 ORTHO05D008525 5.5e-13 79.7 123 39.0
Manes.14G015600 Manihot esculenta HOM05D006918 ORTHO05D008525 9.4e-13 79.0 120 33.3
Phvul.005G056300 Phaseolus vulgaris HOM05D006918 ORTHO05D008525 9.4e-13 79.0 123 36.6
Potri.011G144300 Populus trichocarpa HOM05D006918 ORTHO05D008525 1.6e-12 78.2 120 35.0
TPR.G9758 Trifolium pratense HOM05D006918 ORTHO05D008525 2.7e-12 77.4 123 36.6
Medtr2g069680 Medicago truncatula HOM05D006918 ORTHO05D008525 4.7e-12 76.6 129 38.0
Potri.001G457300 Populus trichocarpa HOM05D006918 ORTHO05D008525 4.7e-12 76.6 123 36.6
VMungo1080G0996 Vigna mungo HOM05D006918 ORTHO05D008525 4.7e-12 76.6 123 37.4
Sabra16G0310000 Salix brachista HOM05D006918 ORTHO05D008525 1.0e-11 75.5 120 36.7
Cpa.g.sc10.35 Carica papaya HOM05D006918 ORTHO05D008525 4.0e-11 73.6 121 35.5
Oeu056983.1 Olea europaea HOM05D006918 ORTHO05D008525 5.2e-11 73.2 116 37.1
Ah.04g163440 Amaranthus hybridus HOM05D006918 ORTHO05D008525 8.8e-11 72.4 76 46.1
AUR62043059 Chenopodium quinoa HOM05D006918 ORTHO05D008525 8.8e-11 72.4 111 38.7
Eucgr.F03183 Eucalyptus grandis HOM05D006918 ORTHO05D008525 8.8e-11 72.4 84 38.1
AUR62044624 Chenopodium quinoa HOM05D006918 ORTHO05D008525 1.1e-10 72.0 76 46.1
Dinv42519 Davidia involucrata HOM05D006918 ORTHO05D008525 1.1e-10 72.0 69 46.4
Lalb_Chr01g0007081 Lupinus albus HOM05D006918 ORTHO05D008525 1.1e-10 72.0 122 35.2
Rhsim04G0005900 Rhododendron simsii HOM05D006918 ORTHO05D008525 1.1e-10 72.0 122 36.1
Solyc07g066390.1 Solanum lycopersicum HOM05D006918 ORTHO05D008525 1.1e-10 72.0 90 42.2
DCAR_013746 Daucus carota HOM05D006918 ORTHO05D008525 1.5e-10 71.6 113 33.6
Peaxi162Scf00452g00086 Petunia axillaris HOM05D006918 ORTHO05D008525 1.5e-10 71.6 93 43.0
PGSC0003DMG400022129 Solanum tuberosum HOM05D006918 ORTHO05D008525 2.0e-10 71.2 128 35.9
HanXRQChr05g0161001 Helianthus annuus HOM05D006918 ORTHO05D008525 2.6e-10 70.9 123 34.1
TWI38G1170 Tripterygium wilfordii HOM05D006918 ORTHO05D008525 3.3e-10 70.5 117 35.0
Nitab4.5_0008437g0030 Nicotiana tabacum HOM05D006918 ORTHO05D008525 7.5e-10 69.3 68 45.6
MSTRG.7057 Avicennia marina HOM05D006918 ORTHO05D008525 9.7e-10 68.9 79 39.2
Lj5A202T40 Lonicera japonica HOM05D006918 ORTHO05D008525 9.7e-10 68.9 129 37.2
Sopen07g034560 Solanum pennellii HOM05D006918 ORTHO05D008525 9.7e-10 68.9 129 36.4
Nitab4.5_0001749g0050 Nicotiana tabacum HOM05D006918 ORTHO05D008525 1.3e-09 68.6 106 34.9
Psat1g002800 Pisum sativum HOM05D006918 ORTHO05D008525 1.3e-09 68.6 124 34.7
CDE04G0465 Ceratophyllum demersum HOM05D006918 ORTHO05D008525 2.2e-09 67.8 69 40.6
Ciclev10019503m.g Citrus clementina HOM05D006918 ORTHO05D008525 2.2e-09 67.8 82 45.1
CAN.G943.32 Capsicum annuum HOM05D006918 ORTHO05D008525 2.8e-09 67.4 64 48.4
TPR.G9740 Trifolium pratense HOM05D006918 ORTHO05D008525 3.7e-09 67.0 117 34.2
EL10Ac4g08564 Beta vulgaris HOM05D006918 ORTHO05D008525 4.8e-09 66.6 76 42.1
SGA_v2.0_scaffold7G03576 Striga asiatica HOM05D006918 ORTHO05D008525 1.1e-08 65.5 106 42.5
Lalb_Chr19g0133401 Lupinus albus HOM05D006918 ORTHO05D008525 3.1e-08 63.9 121 32.2
TWI39G1081 Tripterygium wilfordii HOM05D006918 ORTHO05D008525 3.1e-08 63.9 116 33.6
THA.LOC104808118 Tarenaya hassleriana HOM05D006918 ORTHO05D008525 1.2e-07 62.0 81 43.2
PGR031G3805 Punica granatum HOM05D006918 ORTHO05D008525 2.2e-06 57.8 90 41.1
BcaC08g47472 Brassica carinata HOM05D006918 ORTHO05D008525 3.8e-06 57.0 89 32.6
C06p52950 Brassica napus HOM05D006918 ORTHO05D008525 3.8e-06 57.0 89 32.6
A07p44220 Brassica napus HOM05D006918 ORTHO05D008525 8.5e-06 55.8 89 32.6


User provided reference genes

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