Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_013896 Vanilla planifolia HOM05D005177 ORTHO05D006175 5.8e-133 477.6 253 100.0
PGR102G1116 Punica granatum HOM05D005177 ORTHO05D006175 6.8e-49 198.4 207 52.7
Nn2g10682 Nelumbo nucifera HOM05D005177 ORTHO05D006175 8.9e-49 198.0 229 52.0
PSO063G2407 Papaver somniferum HOM05D005177 ORTHO05D006175 1.2e-48 197.6 217 47.9
Migut.D02184 Erythranthe guttata HOM05D005177 ORTHO05D006175 1.5e-48 197.2 243 46.9
Zm00001eb265420 Zea mays HOM05D005177 ORTHO05D006175 1.5e-48 197.2 231 52.4
PSO339G4756 Papaver somniferum HOM05D005177 ORTHO05D006175 3.4e-48 196.1 216 49.1
CDE07G1541 Ceratophyllum demersum HOM05D005177 ORTHO05D006175 9.8e-48 194.5 213 51.2
TAR636G0661 Trochodendron aralioides HOM05D005177 ORTHO05D006175 9.8e-48 194.5 242 49.6
Nitab4.5_0001802g0050 Nicotiana tabacum HOM05D005177 ORTHO05D006175 1.3e-47 194.1 241 50.6
Os05g0123300 Oryza sativa ssp. japonica HOM05D005177 ORTHO05D006175 1.7e-47 193.7 204 54.4
Manes.11G141500 Manihot esculenta HOM05D005177 ORTHO05D006175 2.8e-47 193.0 222 51.8
SGA_v2.0_scaffold97G29176 Striga asiatica HOM05D005177 ORTHO05D006175 2.8e-47 193.0 235 49.8
MSTRG.18639 Avicennia marina HOM05D005177 ORTHO05D006175 3.7e-47 192.6 231 48.5
Peaxi162Scf00389g00939 Petunia axillaris HOM05D005177 ORTHO05D006175 3.7e-47 192.6 233 48.9
TWI31G0237 Tripterygium wilfordii HOM05D005177 ORTHO05D006175 3.7e-47 192.6 221 52.9
Solyc11g072400.3 Solanum lycopersicum HOM05D005177 ORTHO05D006175 4.9e-47 192.2 244 47.5
vmacro14462 Vaccinium macrocarpon HOM05D005177 ORTHO05D006175 4.9e-47 192.2 230 50.0
Oeu005908.1 Olea europaea HOM05D005177 ORTHO05D006175 1.1e-46 191.0 217 51.2
QL01p037260 Quercus lobata HOM05D005177 ORTHO05D006175 1.1e-46 191.0 240 49.2
Gorai.005G207000 Gossypium raimondii HOM05D005177 ORTHO05D006175 1.4e-46 190.7 215 54.0
Glyma.11G153378 Glycine max HOM05D005177 ORTHO05D006175 1.8e-46 190.3 218 50.0
PGSC0003DMG400027405 Solanum tuberosum HOM05D005177 ORTHO05D006175 1.8e-46 190.3 244 47.5
CiPaw.13G107500 Carya illinoinensis HOM05D005177 ORTHO05D006175 2.4e-46 189.9 216 51.4
Sopen11g030050 Solanum pennellii HOM05D005177 ORTHO05D006175 2.4e-46 189.9 244 48.0
COL.COLO4_25245 Corchorus olitorius HOM05D005177 ORTHO05D006175 3.1e-46 189.5 235 50.6
Prupe.6G094900 Prunus persica HOM05D005177 ORTHO05D006175 3.1e-46 189.5 211 52.6
Nitab4.5_0002129g0070 Nicotiana tabacum HOM05D005177 ORTHO05D006175 4.1e-46 189.1 253 47.4
GSVIVG01025137001 Vitis vinifera HOM05D005177 ORTHO05D006175 4.1e-46 189.1 227 49.8
Gohir.D02G184700 Gossypium hirsutum HOM05D005177 ORTHO05D006175 5.4e-46 188.7 212 52.8
VMungo1127G2232 Vigna mungo HOM05D005177 ORTHO05D006175 5.4e-46 188.7 211 53.6
Gohir.A03G161400 Gossypium hirsutum HOM05D005177 ORTHO05D006175 7.0e-46 188.3 215 53.5
Lalb_Chr03g0027131 Lupinus albus HOM05D005177 ORTHO05D006175 7.0e-46 188.3 224 49.1
Actinidia03746 Actinidia chinensis HOM05D005177 ORTHO05D006175 1.6e-45 187.2 232 50.4
Dinv32787 Davidia involucrata HOM05D005177 ORTHO05D006175 5.9e-45 185.3 227 48.9
unitig_899.g14907 Utricularia gibba HOM05D005177 ORTHO05D006175 5.9e-45 185.3 234 47.9
Cfa011363 Carpinus fangiana HOM05D005177 ORTHO05D006175 7.8e-45 184.9 217 53.9
TWI79G0119 Tripterygium wilfordii HOM05D005177 ORTHO05D006175 1.0e-44 184.5 221 49.8
Aqoxy4G03211 Aquilegia oxysepala HOM05D005177 ORTHO05D006175 1.7e-44 183.7 238 47.5
Cpa.g.sc139.70 Carica papaya HOM05D005177 ORTHO05D006175 2.3e-44 183.3 226 50.0
Phvul.011G072700 Phaseolus vulgaris HOM05D005177 ORTHO05D006175 2.9e-44 183.0 216 49.1
Hund08273 Selenicereus undatus HOM05D005177 ORTHO05D006175 3.8e-44 182.6 271 45.0
MELO3C025749.2 Cucumis melo HOM05D005177 ORTHO05D006175 1.1e-43 181.0 213 52.6
MD03G1105200 Malus domestica HOM05D005177 ORTHO05D006175 1.1e-43 181.0 216 51.9
AUR62006522 Chenopodium quinoa HOM05D005177 ORTHO05D006175 2.5e-43 179.9 227 47.1
Ciclev10028554m.g Citrus clementina HOM05D005177 ORTHO05D006175 3.3e-43 179.5 211 48.8
Psat0s137g0200 Pisum sativum HOM05D005177 ORTHO05D006175 4.3e-43 179.1 223 48.4
Duzib170G1166 Durio zibethinus HOM05D005177 ORTHO05D006175 5.6e-43 178.7 241 49.0
EL10Ac9g22467 Beta vulgaris HOM05D005177 ORTHO05D006175 7.3e-43 178.3 209 47.8
Duzib168G0988 Durio zibethinus HOM05D005177 ORTHO05D006175 7.3e-43 178.3 215 49.8
Dinv14445 Davidia involucrata HOM05D005177 ORTHO05D006175 9.5e-43 177.9 260 44.2
Sed0002828 Sechium edule HOM05D005177 ORTHO05D005441 1.2e-42 177.6 212 52.8
Cc01_g11530 Coffea canephora HOM05D005177 ORTHO05D006175 2.8e-42 176.4 252 46.4
Rhsim01G0220100 Rhododendron simsii HOM05D005177 ORTHO05D006175 3.6e-42 176.0 198 52.0
Thecc.09G260100 Theobroma cacao HOM05D005177 ORTHO05D006175 6.1e-42 175.3 212 50.9
CiPaw.13G107400 Carya illinoinensis HOM05D005177 ORTHO05D006175 1.0e-41 174.5 210 50.5
Cfa011364 Carpinus fangiana HOM05D005177 ORTHO05D006175 2.3e-41 173.3 241 44.4
Ah.01g015010 Amaranthus hybridus HOM05D005177 ORTHO05D006175 4.0e-41 172.6 233 45.9
CANSAT54G2759 Cannabis sativa HOM05D005177 ORTHO05D006175 4.0e-41 172.6 214 49.1
RcHm_v2.0_Chr5g0060611 Rosa chinensis HOM05D005177 ORTHO05D006175 4.0e-41 172.6 216 50.0
Lj3g0023073 Lotus japonicus HOM05D005177 ORTHO05D006175 8.9e-41 171.4 226 46.5
CAN.G553.3 Capsicum annuum HOM05D005177 ORTHO05D006175 1.2e-40 171.0 129 62.0
Haze_23911 Corylus avellana HOM05D005177 ORTHO05D006175 1.5e-40 170.6 217 47.9
CsaV3_6G021650 Cucumis sativus L. HOM05D005177 ORTHO05D006175 2.0e-40 170.2 212 50.0
ATR1159G017 Amborella trichopoda HOM05D005177 ORTHO05D006175 2.6e-40 169.9 258 44.2
Atru.chr3.3689 Acer truncatum HOM05D005177 ORTHO05D006175 3.4e-40 169.5 247 43.7
Haze_23912 Corylus avellana HOM05D005177 ORTHO05D006175 4.4e-40 169.1 217 47.0
Dinv01415 Davidia involucrata HOM05D005177 ORTHO05D006175 4.4e-40 169.1 136 60.3
ClCG02G020960 Citrullus lanatus HOM05D005177 ORTHO05D006175 9.8e-40 167.9 221 49.8
SMO143G0224 Selaginella moellendorffii HOM05D005177 ORTHO05D006175 1.7e-39 167.2 202 49.0
QL01p037225 Quercus lobata HOM05D005177 ORTHO05D006175 2.9e-39 166.4 153 53.6
FvH4_3g33260 Fragaria vesca HOM05D005177 ORTHO05D006175 3.7e-39 166.0 212 48.6
Lsat_1_v5_gn_2_50980 Lactuca sativa HOM05D005177 ORTHO05D006175 1.1e-38 164.5 234 45.7
THA.LOC104814837 Tarenaya hassleriana HOM05D005177 ORTHO05D006175 5.4e-38 162.2 233 45.5
arahy.Tifrunner.gnm1.ann1.Q9R44R Arachis hypogaea HOM05D005177 ORTHO05D006175 7.0e-38 161.8 252 41.3
Mapoly0004s0234 Marchantia polymorpha HOM05D005177 ORTHO05D006175 9.2e-38 161.4 139 56.8
TPR.G14917 Trifolium pratense HOM05D005177 ORTHO05D006175 1.2e-37 161.0 232 44.0
arahy.Tifrunner.gnm1.ann1.X56S8K Arachis hypogaea HOM05D005177 ORTHO05D006175 2.7e-37 159.8 249 41.4
Lalb_Chr01g0004161 Lupinus albus HOM05D005177 ORTHO05D006175 2.7e-37 159.8 208 48.1
Eucgr.B02471 Eucalyptus grandis HOM05D005177 ORTHO05D006175 1.3e-36 157.5 218 45.9
Medtr4g060790 Medicago truncatula HOM05D005177 ORTHO05D006175 2.3e-36 156.8 220 44.1
BcaB05g22637 Brassica carinata HOM05D000280 ORTHO05D000632 1.5e-35 154.1 235 43.8
Ca_11098_v3 Cicer arietinum L. HOM05D005177 ORTHO05D006175 3.3e-35 152.9 249 43.4
Carub.0008s2107 Capsella rubella HOM05D005177 ORTHO05D006175 4.3e-35 152.5 230 44.3
DCAR_006046 Daucus carota HOM05D005177 ORTHO05D006175 4.3e-35 152.5 195 44.1
Sp6g21970 Schrenkiella parvula HOM05D005177 ORTHO05D006175 4.3e-35 152.5 244 43.4
BcaC03g13978 Brassica carinata HOM05D005177 ORTHO05D006175 5.6e-35 152.1 240 44.6
HanXRQChr14g0433031 Helianthus annuus HOM05D005177 ORTHO05D006175 5.6e-35 152.1 208 45.2
BraA02t05734Z Brassica rapa HOM05D005177 ORTHO05D006175 1.6e-34 150.6 240 45.0
Aa31LG1G12430 Aethionema arabicum HOM05D005177 ORTHO05D006175 2.1e-34 150.2 245 40.8
AT5G60370 Arabidopsis thaliana HOM05D005177 ORTHO05D006175 2.8e-34 149.8 245 41.2
Psat6g221840 Pisum sativum HOM05D005177 ORTHO05D006175 3.6e-34 149.4 239 43.1
BolC2t07273H Brassica oleracea HOM05D005177 ORTHO05D006175 8.0e-34 148.3 239 43.1
RcHm_v2.0_Chr5g0060621 Rosa chinensis HOM05D005177 ORTHO05D006175 1.1e-33 147.9 229 42.8
AL8G36980 Arabidopsis lyrata HOM05D005177 ORTHO05D006175 1.4e-33 147.5 248 41.5
ECA238G1817 Erigeron canadensis HOM05D000382 ORTHO05D000391 1.4e-33 147.5 223 43.5
Thhalv10013696m.g Eutrema salsugineum HOM05D005177 ORTHO05D006175 4.0e-33 146.0 244 41.8
CiPaw.13G107200 Carya illinoinensis HOM05D005177 ORTHO05D006175 1.5e-32 144.1 241 42.3
Medtr1g062090 Medicago truncatula HOM05D005177 ORTHO05D006175 2.0e-32 143.7 221 44.8
CARHR274040 Cardamine hirsuta HOM05D005177 ORTHO05D006175 2.6e-32 143.3 245 42.4
Sc06g0010530 Simmondsia chinensis HOM05D005177 ORTHO05D006175 2.6e-32 143.3 204 44.1
Phvul.007G036300 Phaseolus vulgaris HOM05D005177 ORTHO05D006175 1.3e-31 141.0 171 46.8
Pp3c24_6040 Physcomitrium patens HOM05D005177 ORTHO05D006175 2.9e-31 139.8 120 55.0
SHI06048 Sapria himalayana HOM05D005177 ORTHO05D006175 3.7e-31 139.4 219 42.5
Lj3g0021588 Lotus japonicus HOM05D005177 ORTHO05D006175 7.8e-29 131.7 226 42.0
VMungo0251G1016 Vigna mungo HOM05D005177 ORTHO05D006175 5.0e-28 129.0 231 39.8
Lalb_Chr06g0165641 Lupinus albus HOM05D005177 ORTHO05D006175 6.6e-28 128.6 175 42.9
Aqoxy230s004 Aquilegia oxysepala HOM05D000156 ORTHO05D002600 1.5e-27 127.5 98 62.2
CiPaw.13G107600 Carya illinoinensis HOM05D005177 ORTHO05D006175 1.6e-26 124.0 108 54.6
PSO339G4079 Papaver somniferum HOM05D005177 ORTHO05D006175 2.1e-26 123.6 133 50.4
Glyma.20G125100 Glycine max HOM05D005177 ORTHO05D006175 1.8e-25 120.6 170 41.8
PSO384G3506 Papaver somniferum HOM05D005177 ORTHO05D006175 2.3e-25 120.2 133 48.1
CBR_g2921 Chara braunii HOM05D005177 ORTHO05D006175 4.0e-25 119.4 117 45.3
Lj5g0027081 Lotus japonicus HOM05D005177 ORTHO05D006175 9.9e-24 114.8 217 38.2
FAN21G0634 Fragaria x ananassa HOM05D005177 ORTHO05D006175 2.2e-23 113.6 210 40.5
CDE04G2914 Ceratophyllum demersum HOM05D005177 ORTHO05D006175 7.1e-22 108.6 203 36.9
TPR.G4931 Trifolium pratense HOM05D005177 ORTHO05D006175 6.0e-21 105.5 236 33.5
SEGI_18444 Sequoiadendron giganteum HOM05D005177 ORTHO05D006175 1.3e-20 104.4 77 61.0
QL01p037240 Quercus lobata HOM05D005177 ORTHO05D006175 3.9e-20 102.8 109 45.0
Haze_23910 Corylus avellana HOM05D005177 ORTHO05D006175 1.2e-18 97.8 216 37.5
C02p11760 Brassica napus HOM05D005177 ORTHO05D006175 1.6e-18 97.4 101 51.5
CSS0008980 Camellia sinensis var. sinensis HOM05D005177 ORTHO05D006175 3.6e-18 96.3 75 58.7
CDE07G0204 Ceratophyllum demersum HOM05D005177 ORTHO05D006175 2.0e-16 90.5 77 51.9
Lj2A1035T47 Lonicera japonica HOM05D005177 ORTHO05D006175 3.8e-15 86.3 147 41.5
MD11G1130200 Malus domestica HOM05D005177 ORTHO05D008128 9.2e-14 81.6 99 47.5


User provided reference genes

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