Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_013878 Vanilla planifolia HOM05D003340 ORTHO05D003775 2.2e-54 215.3 102 100.0
HPP92_013888 Vanilla planifolia HOM05D003340 ORTHO05D003775 2.7e-49 198.4 135 75.6
Os01g0833400 Oryza sativa ssp. japonica HOM05D003340 ORTHO05D003775 6.0e-12 74.3 148 34.5
Nn5g28288 Nelumbo nucifera HOM05D003340 ORTHO05D003775 8.6e-11 70.5 149 34.9
Cc10_g11880 Coffea canephora HOM05D003340 ORTHO05D003775 1.1e-10 70.1 132 35.6
Lalb_Chr10g0101671 Lupinus albus HOM05D003340 ORTHO05D003775 1.5e-10 69.7 135 37.8
Zm00001eb289950 Zea mays HOM05D003340 ORTHO05D003775 4.3e-10 68.2 135 36.3
FvH4_2g26960 Fragaria vesca HOM05D003340 ORTHO05D003775 2.1e-09 65.9 78 44.9
PGR044G1945 Punica granatum HOM05D003340 ORTHO05D003775 2.8e-09 65.5 132 35.6
Zm00001eb368310 Zea mays HOM05D003340 ORTHO05D003775 3.6e-09 65.1 152 32.9
PSO528G0096 Papaver somniferum HOM05D003340 ORTHO05D003775 4.7e-09 64.7 140 33.6
SalBow7G3799 Salvia bowleyana HOM05D003340 ORTHO05D003775 4.7e-09 64.7 144 31.9
HPP92_019003 Vanilla planifolia HOM05D003340 ORTHO05D003775 1.1e-08 63.5 136 32.4
Nitab4.5_0001187g0040 Nicotiana tabacum HOM05D003340 ORTHO05D003775 1.4e-08 63.2 135 31.9
Nitab4.5_0001344g0050 Nicotiana tabacum HOM05D003340 ORTHO05D003775 1.4e-08 63.2 135 31.9
Dinv07220 Davidia involucrata HOM05D003340 ORTHO05D003775 1.8e-08 62.8 131 34.4
Nn1g08798 Nelumbo nucifera HOM05D003340 ORTHO05D003775 1.8e-08 62.8 125 36.0
Psat6g041160 Pisum sativum HOM05D003340 ORTHO05D003775 1.8e-08 62.8 130 35.4
HPP92_018105 Vanilla planifolia HOM05D003340 ORTHO05D003775 1.8e-08 62.8 132 33.3
Aqoxy6G00217 Aquilegia oxysepala HOM05D003340 ORTHO05D003775 3.1e-08 62.0 133 33.1
AUR62014338 Chenopodium quinoa HOM05D003340 ORTHO05D003775 3.1e-08 62.0 143 34.3
EL10Ac1g01010 Beta vulgaris HOM05D003340 ORTHO05D003775 4.0e-08 61.6 147 35.4
Glyma.13G079000 Glycine max HOM05D003340 ORTHO05D003775 4.0e-08 61.6 130 35.4
Glyma.14G150300 Glycine max HOM05D003340 ORTHO05D003775 4.0e-08 61.6 130 35.4
Manes.18G077306 Manihot esculenta HOM05D003340 ORTHO05D003775 4.0e-08 61.6 137 32.8
SGA_v2.0_scaffold52G18966 Striga asiatica HOM05D003340 ORTHO05D003775 4.0e-08 61.6 144 31.2
AUR62019080 Chenopodium quinoa HOM05D003340 ORTHO05D003775 5.2e-08 61.2 143 34.3
Manes.02G163400 Manihot esculenta HOM05D003340 ORTHO05D003775 5.2e-08 61.2 132 34.8
Sopen04g027620 Solanum pennellii HOM05D003340 ORTHO05D003775 5.2e-08 61.2 135 31.1
CSS0046765 Camellia sinensis var. sinensis HOM05D003340 ORTHO05D003775 6.8e-08 60.8 127 34.6
CiPaw.05G221600 Carya illinoinensis HOM05D003340 ORTHO05D003775 6.8e-08 60.8 132 32.6
Haze_00442 Corylus avellana HOM05D003340 ORTHO05D003775 6.8e-08 60.8 130 33.1
Duzib093G0952 Durio zibethinus HOM05D003340 ORTHO05D003775 8.9e-08 60.5 130 33.8
Eucgr.F04352 Eucalyptus grandis HOM05D003340 ORTHO05D003775 8.9e-08 60.5 130 32.3
Lalb_Chr11g0065901 Lupinus albus HOM05D003340 ORTHO05D003775 8.9e-08 60.5 135 33.3
PSO170G4666 Papaver somniferum HOM05D003340 ORTHO05D003775 1.2e-07 60.1 137 32.8
Os05g0126800 Oryza sativa ssp. japonica HOM05D003340 ORTHO05D003775 1.5e-07 59.7 127 34.6
Gohir.A06G044800 Gossypium hirsutum HOM05D003340 ORTHO05D003775 2.0e-07 59.3 130 33.1
Gohir.D06G045300 Gossypium hirsutum HOM05D003340 ORTHO05D003775 2.0e-07 59.3 130 33.1
Gorai.010G050300 Gossypium raimondii HOM05D003340 ORTHO05D003775 2.0e-07 59.3 130 33.1
arahy.Tifrunner.gnm1.ann1.VCNM2G Arachis hypogaea HOM05D003340 ORTHO05D003775 2.6e-07 58.9 122 35.2
Gohir.A05G268800 Gossypium hirsutum HOM05D003340 ORTHO05D003775 2.6e-07 58.9 127 33.1
Gohir.D05G270700 Gossypium hirsutum HOM05D003340 ORTHO05D003775 2.6e-07 58.9 127 33.1
Gorai.009G283300 Gossypium raimondii HOM05D003340 ORTHO05D003775 2.6e-07 58.9 127 33.1
Solyc04g071630.3 Solanum lycopersicum HOM05D003340 ORTHO05D003775 2.6e-07 58.9 135 30.4
MSTRG.25383 Avicennia marina HOM05D003340 ORTHO05D003775 3.4e-07 58.5 139 30.2
CiPaw.06G030900 Carya illinoinensis HOM05D003340 ORTHO05D003775 3.4e-07 58.5 131 31.3
Ca_12617_v3 Cicer arietinum L. HOM05D003340 ORTHO05D003775 3.4e-07 58.5 130 34.6
COL.COLO4_36312 Corchorus olitorius HOM05D003340 ORTHO05D003775 3.4e-07 58.5 134 33.6
Duzib041G0745 Durio zibethinus HOM05D003340 ORTHO05D003775 3.4e-07 58.5 131 32.8
Gohir.D01G180500 Gossypium hirsutum HOM05D003340 ORTHO05D003775 3.4e-07 58.5 130 33.1
Gorai.002G222100 Gossypium raimondii HOM05D003340 ORTHO05D003775 3.4e-07 58.5 130 33.1
TAR381G1109 Trochodendron aralioides HOM05D003340 ORTHO05D003775 4.4e-07 58.2 131 32.1
Potri.002G083600 Populus trichocarpa HOM05D003340 ORTHO05D003775 5.8e-07 57.8 129 33.3
Hund26810 Selenicereus undatus HOM05D003340 ORTHO05D003775 5.8e-07 57.8 143 33.6
Thecc.08G125400 Theobroma cacao HOM05D003340 ORTHO05D003775 5.8e-07 57.8 130 33.1
Gohir.A01G189000 Gossypium hirsutum HOM05D003340 ORTHO05D003775 7.5e-07 57.4 130 31.5
Lj1g0019913 Lotus japonicus HOM05D003340 ORTHO05D003775 7.5e-07 57.4 130 34.6
MD08G1162700 Malus domestica HOM05D003340 ORTHO05D003775 7.5e-07 57.4 129 32.6
Phvul.008G161200 Phaseolus vulgaris HOM05D003340 ORTHO05D003775 7.5e-07 57.4 130 34.6
Rhsim06G0103500 Rhododendron simsii HOM05D003340 ORTHO05D003775 7.5e-07 57.4 122 32.8
CSS0003781 Camellia sinensis var. sinensis HOM05D003340 ORTHO05D003775 9.8e-07 57.0 123 35.0
MBI11_g05791_MAGBIO Magnolia biondii HOM05D003340 ORTHO05D003775 9.8e-07 57.0 114 32.5
Oeu017298.1 Olea europaea HOM05D003340 ORTHO05D003775 9.8e-07 57.0 128 32.8
FAN15G0091 Fragaria x ananassa HOM05D003340 ORTHO05D003775 1.3e-06 56.6 110 32.7
Oeu059436.2 Olea europaea HOM05D003340 ORTHO05D003775 1.3e-06 56.6 130 33.1
Sabra02G0065600 Salix brachista HOM05D003340 ORTHO05D003775 1.3e-06 56.6 127 33.1
Duzib116G0828 Durio zibethinus HOM05D003340 ORTHO05D003775 1.7e-06 56.2 117 36.8
FAN20G1789 Fragaria x ananassa HOM05D003340 ORTHO05D003775 1.7e-06 56.2 110 32.7
Lj4g0019423 Lotus japonicus HOM05D003340 ORTHO05D003775 1.7e-06 56.2 123 32.5
Medtr3g088030 Medicago truncatula HOM05D003340 ORTHO05D003775 1.7e-06 56.2 134 32.1
QL09p034593 Quercus lobata HOM05D003340 ORTHO05D003775 1.7e-06 56.2 128 32.0
CANSAT25G3576 Cannabis sativa HOM05D003340 ORTHO05D003775 2.2e-06 55.8 132 31.8
CANSAT25G3664 Cannabis sativa HOM05D003340 ORTHO05D003775 2.2e-06 55.8 114 34.2
Peaxi162Scf00304g00221 Petunia axillaris HOM05D003340 ORTHO05D003775 2.2e-06 55.8 157 29.3
MD15G1348300 Malus domestica HOM05D003340 ORTHO05D003775 2.9e-06 55.5 129 32.6
Hund17293 Selenicereus undatus HOM05D003340 ORTHO05D003775 2.9e-06 55.5 92 38.0
GSVIVG01022376001 Vitis vinifera HOM05D003340 ORTHO05D003775 2.9e-06 55.5 129 31.8
Lj1g0013118 Lotus japonicus HOM05D003340 ORTHO05D003775 3.7e-06 55.1 135 31.1
Hund21783 Selenicereus undatus HOM05D003340 ORTHO05D003775 3.7e-06 55.1 113 34.5
ATR0743G272 Amborella trichopoda HOM05D003340 ORTHO05D003775 4.9e-06 54.7 111 31.5
MELO3C010478.2 Cucumis melo HOM05D003340 ORTHO05D003775 4.9e-06 54.7 135 32.6
CsaV3_4G028260 Cucumis sativus L. HOM05D003340 ORTHO05D003775 4.9e-06 54.7 135 32.6
THA.LOC104817332 Tarenaya hassleriana HOM05D003340 ORTHO05D003775 4.9e-06 54.7 131 35.1
TPR.G25816 Trifolium pratense HOM05D003340 ORTHO05D003775 4.9e-06 54.7 122 32.8
Thhalv10029030m.g Eutrema salsugineum HOM05D003340 ORTHO05D003775 6.4e-06 54.3 129 32.6
TWI74G0103 Tripterygium wilfordii HOM05D003340 ORTHO05D003775 6.4e-06 54.3 118 30.5
ClCG11G015750 Citrullus lanatus HOM05D003340 ORTHO05D003775 8.3e-06 53.9 131 32.8
Migut.N00692 Erythranthe guttata HOM05D003340 ORTHO05D003775 8.3e-06 53.9 117 30.8
VMungo0647G0885 Vigna mungo HOM05D000654 ORTHO05D002330 8.3e-06 53.9 122 35.2


User provided reference genes

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