Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_013874 Vanilla planifolia HOM05D004241 ORTHO05D006031 9.2e-107 390.2 192 100.0
HPP92_013785 Vanilla planifolia HOM05D004241 ORTHO05D006031 3.7e-47 192.2 110 89.1
COL.COLO4_03385 Corchorus olitorius HOM05D004241 ORTHO05D006031 2.0e-37 159.8 137 60.6
Gohir.A04G092900 Gossypium hirsutum HOM05D004241 ORTHO05D006031 3.5e-37 159.1 114 69.3
Gohir.D04G132200 Gossypium hirsutum HOM05D004241 ORTHO05D006031 3.5e-37 159.1 137 60.6
Gorai.012G116000 Gossypium raimondii HOM05D004241 ORTHO05D006031 3.5e-37 159.1 137 60.6
Cfa017183 Carpinus fangiana HOM05D004241 ORTHO05D006031 5.9e-37 158.3 113 72.6
QL07p035079 Quercus lobata HOM05D004241 ORTHO05D006031 7.7e-37 157.9 101 75.2
Phvul.008G096500 Phaseolus vulgaris HOM05D004241 ORTHO05D006031 1.0e-36 157.5 99 76.8
CSS0018345 Camellia sinensis var. sinensis HOM05D004241 ORTHO05D006031 1.7e-36 156.8 101 76.2
Duzib128G1618 Durio zibethinus HOM05D004241 ORTHO05D006031 1.7e-36 156.8 110 72.7
CiPaw.09G211300 Carya illinoinensis HOM05D004241 ORTHO05D006031 2.2e-36 156.4 102 76.5
Nn2g13169 Nelumbo nucifera HOM05D004241 ORTHO05D006031 2.2e-36 156.4 100 77.0
TAR636G3470 Trochodendron aralioides HOM05D004241 ORTHO05D006031 2.2e-36 156.4 111 70.3
Duzib093G0784 Durio zibethinus HOM05D004241 ORTHO05D006031 2.9e-36 156.0 101 75.2
GSVIVG01011187001 Vitis vinifera HOM05D004241 ORTHO05D006031 2.9e-36 156.0 100 78.0
ATR0681G392 Amborella trichopoda HOM05D004241 ORTHO05D006031 5.0e-36 155.2 105 72.4
Dinv05780 Davidia involucrata HOM05D004241 ORTHO05D006031 5.0e-36 155.2 111 70.3
Cc06_g01120 Coffea canephora HOM05D004241 ORTHO05D006031 8.5e-36 154.5 118 66.1
Dinv04461 Davidia involucrata HOM05D004241 ORTHO05D006031 8.5e-36 154.5 111 70.3
CiPaw.10G157700 Carya illinoinensis HOM05D004241 ORTHO05D006031 1.1e-35 154.1 101 75.2
Ca_07660_v3 Cicer arietinum L. HOM05D004241 ORTHO05D006031 1.1e-35 154.1 111 68.5
Ciclev10011985m.g Citrus clementina HOM05D004241 ORTHO05D006031 1.1e-35 154.1 111 68.5
Lj1g0026131 Lotus japonicus HOM05D004241 ORTHO05D006031 1.1e-35 154.1 101 74.3
Thecc.05G012600 Theobroma cacao HOM05D004241 ORTHO05D006031 1.1e-35 154.1 101 73.3
Eucgr.A00535 Eucalyptus grandis HOM05D004241 ORTHO05D006031 1.5e-35 153.7 101 75.2
Glyma.07G152300 Glycine max HOM05D004241 ORTHO05D006031 1.5e-35 153.7 99 74.7
Manes.09G106900 Manihot esculenta HOM05D004241 ORTHO05D006031 1.5e-35 153.7 101 74.3
Medtr7g069210 Medicago truncatula HOM05D004241 ORTHO05D006031 1.5e-35 153.7 100 76.0
VMungo1383G0980 Vigna mungo HOM05D004241 ORTHO05D006031 1.5e-35 153.7 99 74.7
Atru.chr8.2269 Acer truncatum HOM05D004241 ORTHO05D006031 1.9e-35 153.3 101 73.3
MELO3C026000.2 Cucumis melo HOM05D004241 ORTHO05D006031 1.9e-35 153.3 112 67.9
Dinv13159 Davidia involucrata HOM05D004241 ORTHO05D006031 1.9e-35 153.3 112 67.9
TAR633G2528 Trochodendron aralioides HOM05D004241 ORTHO05D006031 1.9e-35 153.3 101 73.3
Glyma.18G203400 Glycine max HOM05D004241 ORTHO05D006031 3.2e-35 152.5 99 73.7
ClCG04G006920 Citrullus lanatus HOM05D004241 ORTHO05D006031 4.2e-35 152.1 99 74.7
Lj3A950T42 Lonicera japonica HOM05D004241 ORTHO05D006031 4.2e-35 152.1 101 70.3
BcaB01g00474 Brassica carinata HOM05D004241 ORTHO05D006031 7.2e-35 151.4 101 71.3
A09p44970 Brassica napus HOM05D004241 ORTHO05D006031 7.2e-35 151.4 101 71.3
BolC8t50320H Brassica oleracea HOM05D004241 ORTHO05D006031 7.2e-35 151.4 101 71.3
BraA09t39957Z Brassica rapa HOM05D004241 ORTHO05D006031 7.2e-35 151.4 101 71.3
CANSAT35G0589 Cannabis sativa HOM05D004241 ORTHO05D006031 7.2e-35 151.4 102 70.6
TWI74G0606 Tripterygium wilfordii HOM05D004241 ORTHO05D006031 7.2e-35 151.4 112 67.0
BcaNung00368 Brassica carinata HOM05D004241 ORTHO05D006031 1.2e-34 150.6 101 70.3
Psat3g126440 Pisum sativum HOM05D004241 ORTHO05D006031 1.2e-34 150.6 99 73.7
Prupe.6G280100 Prunus persica HOM05D004241 ORTHO05D006031 1.2e-34 150.6 102 74.5
Sc07g0006700 Simmondsia chinensis HOM05D004241 ORTHO05D006031 1.2e-34 150.6 99 72.7
C08p27050 Brassica napus HOM05D004241 ORTHO05D006031 1.6e-34 150.2 151 55.6
Cpa.g.sc11.77 Carica papaya HOM05D004241 ORTHO05D006031 1.6e-34 150.2 99 72.7
HanXRQChr06g0182231 Helianthus annuus HOM05D004241 ORTHO05D006031 1.6e-34 150.2 99 72.7
PGR031G0770 Punica granatum HOM05D004241 ORTHO05D006031 1.6e-34 150.2 100 75.0
MSTRG.18996 Avicennia marina HOM05D004241 ORTHO05D006031 2.1e-34 149.8 99 72.7
Haze_21025 Corylus avellana HOM05D004241 ORTHO05D006031 2.1e-34 149.8 122 66.4
FAN02G4369 Fragaria x ananassa HOM05D004241 ORTHO05D006031 2.7e-34 149.4 100 73.0
ECA236G0379 Erigeron canadensis HOM05D000031 ORTHO05D006031 3.6e-34 149.1 100 75.0
TPR.G35446 Trifolium pratense HOM05D004241 ORTHO05D006031 3.6e-34 149.1 101 71.3
Oeu017800.1 Olea europaea HOM05D004241 ORTHO05D006031 4.7e-34 148.7 99 70.7
Sopen09g007610 Solanum pennellii HOM05D004241 ORTHO05D006031 6.1e-34 148.3 99 74.7
Aqoxy2G00847 Aquilegia oxysepala HOM05D004241 ORTHO05D006031 8.0e-34 147.9 119 63.9
Carub.0005s1817 Capsella rubella HOM05D004241 ORTHO05D006031 8.0e-34 147.9 110 69.1
AUR62030817 Chenopodium quinoa HOM05D004241 ORTHO05D006031 8.0e-34 147.9 109 67.9
RcHm_v2.0_Chr3g0462631 Rosa chinensis HOM05D004241 ORTHO05D006031 8.0e-34 147.9 101 73.3
CsaV3_4G026340 Cucumis sativus L. HOM05D004241 ORTHO05D006031 1.0e-33 147.5 99 72.7
FvH4_6g11190 Fragaria vesca HOM05D004241 ORTHO05D006031 1.0e-33 147.5 100 72.0
FAN09G0084 Fragaria x ananassa HOM05D004241 ORTHO05D006031 1.0e-33 147.5 100 72.0
FAN09G0733 Fragaria x ananassa HOM05D004241 ORTHO05D006031 1.0e-33 147.5 100 72.0
Hma1.2p1_0362F.1_g136490 Hydrangea macrophylla HOM05D004241 ORTHO05D006031 1.0e-33 147.5 102 73.5
Hund14874 Selenicereus undatus HOM05D004241 ORTHO05D006031 1.0e-33 147.5 101 70.3
Migut.J00141 Erythranthe guttata HOM05D004241 ORTHO05D006031 1.4e-33 147.1 99 70.7
THA.LOC104805975 Tarenaya hassleriana HOM05D004241 ORTHO05D006031 1.4e-33 147.1 99 73.7
A01p23250 Brassica napus HOM05D003030 ORTHO05D006031 1.8e-33 146.7 101 70.3
C01p28890 Brassica napus HOM05D003030 ORTHO05D006031 1.8e-33 146.7 100 71.0
BolC1t02821H Brassica oleracea HOM05D004241 ORTHO05D006031 1.8e-33 146.7 100 71.0
BraA01t02235Z Brassica rapa HOM05D004241 ORTHO05D006031 1.8e-33 146.7 101 70.3
MD00G1061800 Malus domestica HOM05D004241 ORTHO05D006031 1.8e-33 146.7 101 70.3
Nn2g10892 Nelumbo nucifera HOM05D004241 ORTHO05D006031 1.8e-33 146.7 109 67.9
Oeu038754.1 Olea europaea HOM05D004241 ORTHO05D006031 1.8e-33 146.7 99 70.7
PGSC0003DMG400008481 Solanum tuberosum HOM05D004241 ORTHO05D006031 1.8e-33 146.7 99 73.7
DCAR_015394 Daucus carota HOM05D004241 ORTHO05D006031 2.3e-33 146.4 99 69.7
Sed0025380 Sechium edule HOM05D004241 ORTHO05D006031 2.3e-33 146.4 99 73.7
BcaB01g00414 Brassica carinata HOM05D004241 ORTHO05D006031 3.0e-33 146.0 101 70.3
Dinv01710 Davidia involucrata HOM05D004241 ORTHO05D006031 3.0e-33 146.0 98 73.5
Lalb_Chr19g0124421 Lupinus albus HOM05D004241 ORTHO05D006031 3.0e-33 146.0 99 72.7
MD12G1171900 Malus domestica HOM05D004241 ORTHO05D006031 4.0e-33 145.6 114 65.8
Nitab4.5_0000261g0130 Nicotiana tabacum HOM05D004241 ORTHO05D006031 4.0e-33 145.6 99 72.7
Sabra06G0078400 Salix brachista HOM05D004241 ORTHO05D006031 4.0e-33 145.6 105 68.6
AUR62030480 Chenopodium quinoa HOM05D004241 ORTHO05D006031 5.2e-33 145.2 109 67.0
Zm00001eb286140 Zea mays HOM05D004241 ORTHO05D006031 5.2e-33 145.2 105 73.3
Actinidia05359 Actinidia chinensis HOM05D004241 ORTHO05D006031 6.7e-33 144.8 120 63.3
AL5G32280 Arabidopsis lyrata HOM05D004241 ORTHO05D006031 6.7e-33 144.8 100 70.0
AT3G51820 Arabidopsis thaliana HOM05D004241 ORTHO05D006031 6.7e-33 144.8 100 70.0
CDE04G1685 Ceratophyllum demersum HOM05D004241 ORTHO05D006031 6.7e-33 144.8 99 71.7
Thhalv10010408m.g Eutrema salsugineum HOM05D004241 ORTHO05D006031 6.7e-33 144.8 101 69.3
Nitab4.5_0008676g0010 Nicotiana tabacum HOM05D004241 ORTHO05D006031 6.7e-33 144.8 103 71.8
CARHR161450 Cardamine hirsuta HOM05D004241 ORTHO05D006031 8.8e-33 144.4 100 70.0
Potri.006G102100 Populus trichocarpa HOM05D004241 ORTHO05D006031 8.8e-33 144.4 101 69.3
Sp5g10450 Schrenkiella parvula HOM05D004241 ORTHO05D006031 8.8e-33 144.4 101 70.3
CAN.G283.14 Capsicum annuum HOM05D004241 ORTHO05D006031 1.2e-32 144.1 135 58.5
BcaC09g50106 Brassica carinata HOM05D004241 ORTHO05D006031 1.5e-32 143.7 100 70.0
SEGI_30165 Sequoiadendron giganteum HOM05D004241 ORTHO05D006031 1.5e-32 143.7 98 69.4
MBI15_g19417_MAGBIO Magnolia biondii HOM05D004241 ORTHO05D006031 2.6e-32 142.9 84 81.0
Aa31LG10G9090 Aethionema arabicum HOM05D004241 ORTHO05D006031 4.4e-32 142.1 102 70.6
Ah.12g058810 Amaranthus hybridus HOM05D004241 ORTHO05D006031 4.4e-32 142.1 102 69.6
Potri.016G119400 Populus trichocarpa HOM05D004241 ORTHO05D006031 7.5e-32 141.4 100 71.0
CDE08G0537 Ceratophyllum demersum HOM05D004241 ORTHO05D006031 9.7e-32 141.0 99 69.7
Rhsim04G0126500 Rhododendron simsii HOM05D004241 ORTHO05D006031 9.7e-32 141.0 101 65.3
unitig_578.g15901 Utricularia gibba HOM05D004241 ORTHO05D006031 9.7e-32 141.0 136 55.9
Os05g0349700 Oryza sativa ssp. japonica HOM05D004241 ORTHO05D006031 2.2e-31 139.8 96 74.0
EL10Ac5g12540 Beta vulgaris HOM05D004241 ORTHO05D006031 4.8e-31 138.7 110 64.5
SMO271G0089 Selaginella moellendorffii HOM05D004241 ORTHO05D006031 6.3e-31 138.3 98 66.3
arahy.Tifrunner.gnm1.ann1.8A66NB Arachis hypogaea HOM05D004241 ORTHO05D006031 8.2e-31 137.9 84 78.6
arahy.Tifrunner.gnm1.ann1.YJ5G8U Arachis hypogaea HOM05D004241 ORTHO05D006031 1.2e-29 134.0 101 66.3
Peaxi162Scf00890g00119 Petunia axillaris HOM05D004241 ORTHO05D006031 1.6e-29 133.7 84 76.2
PSO801G0614 Papaver somniferum HOM05D004241 ORTHO05D006031 2.0e-29 133.3 102 63.7
Lj2C71T11 Lonicera japonica HOM05D004241 ORTHO05D006031 2.7e-29 132.9 96 67.7
PSO339G5814 Papaver somniferum HOM05D004241 ORTHO05D006031 3.5e-29 132.5 102 63.7
arahy.Tifrunner.gnm1.ann1.F5Z0S5 Arachis hypogaea HOM05D004241 ORTHO05D006031 7.7e-29 131.3 101 65.3
Aqoxy4G02498 Aquilegia oxysepala HOM05D004241 ORTHO05D006031 1.0e-28 131.0 103 65.0
Lsat_1_v5_gn_8_101501 Lactuca sativa HOM05D004241 ORTHO05D006031 1.7e-28 130.2 78 76.9
SalBow5G3053 Salvia bowleyana HOM05D004241 ORTHO05D006031 1.5e-27 127.1 127 55.1
Sabra16G0115300 Salix brachista HOM05D004241 ORTHO05D006031 2.5e-27 126.3 75 80.0
arahy.Tifrunner.gnm1.ann1.DE57MX Arachis hypogaea HOM05D004241 ORTHO05D001299 1.4e-25 120.6 80 71.2
arahy.Tifrunner.gnm1.ann1.12W07B Arachis hypogaea HOM05D004241 ORTHO05D001299 1.8e-25 120.2 87 66.7
Pp3c13_13830 Physcomitrium patens HOM05D004241 ORTHO05D006031 3.0e-25 119.4 97 60.8
Mapoly0045s0080 Marchantia polymorpha HOM05D004241 ORTHO05D006031 3.4e-24 115.9 96 58.3
PSO339G4053 Papaver somniferum HOM05D004241 ORTHO05D006031 7.5e-24 114.8 99 59.6
PSO384G4055 Papaver somniferum HOM05D004241 ORTHO05D006031 7.5e-24 114.8 101 59.4
arahy.Tifrunner.gnm1.ann1.ZW8CA6 Arachis hypogaea HOM05D004241 ORTHO05D006031 1.3e-23 114.0 72 75.0
vmacro08890 Vaccinium macrocarpon HOM05D004241 ORTHO05D006031 2.8e-23 112.8 171 41.5
AagrBONN_evm.TU.Sc2ySwM_228.1146 Anthoceros agrestis HOM05D004241 ORTHO05D006031 2.4e-22 109.8 84 61.9
CDE04G2983 Ceratophyllum demersum HOM05D004241 ORTHO05D006031 4.1e-22 109.0 166 39.8
FAN14G4537 Fragaria x ananassa HOM05D004241 ORTHO05D006031 2.0e-21 106.7 56 82.1
Prupe.4G268700 Prunus persica HOM05D004241 ORTHO05D006031 1.2e-18 97.4 54 81.5
MCO16G058 Micromonas commoda HOM05D004241 ORTHO05D006031 4.7e-18 95.5 71 59.2
Cre06.g294750 Chlamydomonas reinhardtii HOM05D004241 ORTHO05D006031 1.0e-17 94.4 103 48.5
Rhsim04G0126400 Rhododendron simsii HOM05D004241 ORTHO05D006031 3.0e-17 92.8 74 63.5
arahy.Tifrunner.gnm1.ann1.I63G1M Arachis hypogaea HOM05D004241 ORTHO05D006031 2.7e-13 79.7 49 79.6
PRCOL_00003234 Prasinoderma coloniale HOM05D004241 ORTHO05D006031 4.5e-13 79.0 71 54.9
vmacro08889 Vaccinium macrocarpon HOM05D004241 ORTHO05D006031 4.5e-13 79.0 96 45.8
COL.COLO4_19973 Corchorus olitorius HOM05D004241 ORTHO05D006031 1.7e-12 77.0 36 88.9
arahy.Tifrunner.gnm1.ann1.IR2XKV Arachis hypogaea HOM05D004241 ORTHO05D006031 2.3e-12 76.6 82 53.7
arahy.Tifrunner.gnm1.ann1.Z8S8NK Arachis hypogaea HOM05D004241 ORTHO05D006031 5.6e-11 72.0 75 53.3
arahy.Tifrunner.gnm1.ann1.44A4XL Arachis hypogaea HOM05D004241 ORTHO05D026924 2.6e-08 63.2 53 60.4


User provided reference genes

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