Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_013733 Vanilla planifolia HOM05D007336 ORTHO05D009339 1.3e-61 239.6 122 100.0
TAR362G0973 Trochodendron aralioides HOM05D007336 ORTHO05D009339 6.2e-40 167.5 118 65.3
CDE02G0601 Ceratophyllum demersum HOM05D007336 ORTHO05D009339 8.1e-40 167.2 119 68.9
GSVIVG01031156001 Vitis vinifera HOM05D007336 ORTHO05D009339 6.8e-39 164.1 118 65.3
Thecc.05G317300 Theobroma cacao HOM05D007336 ORTHO05D009339 1.5e-38 162.9 118 66.9
COL.COLO4_03798 Corchorus olitorius HOM05D007336 ORTHO05D009339 2.0e-38 162.5 118 65.3
CiPaw.08G158700 Carya illinoinensis HOM05D007336 ORTHO05D009339 2.6e-38 162.2 118 64.4
Aqoxy2G02873 Aquilegia oxysepala HOM05D007336 ORTHO05D009339 7.6e-38 160.6 116 66.4
Manes.01G127100 Manihot esculenta HOM05D007336 ORTHO05D009339 7.6e-38 160.6 121 62.8
Cfa006663 Carpinus fangiana HOM05D007336 ORTHO05D009339 1.3e-37 159.8 118 64.4
Atru.chr1.2192 Acer truncatum HOM05D007336 ORTHO05D009339 2.2e-37 159.1 118 64.4
MD12G1210100 Malus domestica HOM05D007336 ORTHO05D009339 2.2e-37 159.1 121 62.8
Duzib128G0390 Durio zibethinus HOM05D007336 ORTHO05D009339 2.9e-37 158.7 118 66.1
Prupe.6G317700 Prunus persica HOM05D007336 ORTHO05D009339 2.9e-37 158.7 121 62.8
Atru.chr1.2191 Acer truncatum HOM05D007336 ORTHO05D009339 8.3e-37 157.1 118 63.6
ClCG02G015210 Citrullus lanatus HOM05D007336 ORTHO05D009339 8.3e-37 157.1 119 64.7
MELO3C004210.2 Cucumis melo HOM05D007336 ORTHO05D009339 8.3e-37 157.1 119 65.5
Gorai.007G303000 Gossypium raimondii HOM05D007336 ORTHO05D009339 8.3e-37 157.1 121 65.3
MD04G1197300 Malus domestica HOM05D007336 ORTHO05D009339 1.4e-36 156.4 121 62.0
Ciclev10002848m.g Citrus clementina HOM05D007336 ORTHO05D009339 1.9e-36 156.0 118 62.7
Potri.005G021800 Populus trichocarpa HOM05D007336 ORTHO05D009339 1.9e-36 156.0 114 65.8
Gohir.D11G280800 Gossypium hirsutum HOM05D007336 ORTHO05D009339 7.1e-36 154.1 121 64.5
CsaV3_2G006800 Cucumis sativus L. HOM05D007336 ORTHO05D009339 1.2e-35 153.3 119 64.7
Migut.G00122 Erythranthe guttata HOM05D007336 ORTHO05D009339 1.6e-35 152.9 118 63.6
PGR031G1948 Punica granatum HOM05D007336 ORTHO05D009339 2.1e-35 152.5 117 63.2
Lalb_Chr16g0391581 Lupinus albus HOM05D007336 ORTHO05D009339 6.0e-35 151.0 113 61.1
Dinv29713 Davidia involucrata HOM05D002548 ORTHO05D003031 3.0e-34 148.7 118 64.4
THA.LOC104805904 Tarenaya hassleriana HOM05D007336 ORTHO05D009339 3.0e-34 148.7 110 65.5
MBI18_g25083_MAGBIO Magnolia biondii HOM05D007336 ORTHO05D009339 3.9e-34 148.3 146 54.1
Actinidia40305 Actinidia chinensis HOM05D007336 ORTHO05D009339 5.1e-34 147.9 118 61.9
Dinv44340 Davidia involucrata HOM05D007336 ORTHO05D009339 5.1e-34 147.9 118 65.3
Lsat_1_v5_gn_6_76001 Lactuca sativa HOM05D007336 ORTHO05D009339 5.1e-34 147.9 118 63.6
Zm00001eb300400 Zea mays HOM05D007336 ORTHO05D009339 6.6e-34 147.5 117 62.4
Psat0s3672g0040 Pisum sativum HOM05D007336 ORTHO05D009339 1.1e-33 146.7 118 55.9
CANSAT54G2288 Cannabis sativa HOM05D007336 ORTHO05D009339 1.5e-33 146.4 118 60.2
Glyma.19G230700 Glycine max HOM05D007336 ORTHO05D009339 1.5e-33 146.4 118 57.6
Eucgr.H03266 Eucalyptus grandis HOM05D007336 ORTHO05D009339 1.9e-33 146.0 117 57.3
Phvul.001G227200 Phaseolus vulgaris HOM05D007336 ORTHO05D009339 2.5e-33 145.6 119 58.0
vmacro08103 Vaccinium macrocarpon HOM05D007336 ORTHO05D009339 2.5e-33 145.6 118 62.7
arahy.Tifrunner.gnm1.ann1.N7WCQ3 Arachis hypogaea HOM05D000001 ORTHO05D010781 3.3e-33 145.2 114 62.3
arahy.Tifrunner.gnm1.ann1.63GRQU Arachis hypogaea HOM05D007336 ORTHO05D010781 4.3e-33 144.8 119 59.7
Haze_04108 Corylus avellana HOM05D002548 ORTHO05D003031 4.3e-33 144.8 156 50.0
Rhsim04G0227800 Rhododendron simsii HOM05D007336 ORTHO05D009339 4.3e-33 144.8 118 61.0
MSTRG.3884 Avicennia marina HOM05D007336 ORTHO05D009339 5.6e-33 144.4 118 59.3
FAN09G1805 Fragaria x ananassa HOM05D007336 ORTHO05D009339 5.6e-33 144.4 121 57.0
FAN14G5314 Fragaria x ananassa HOM05D007336 ORTHO05D009339 5.6e-33 144.4 121 57.0
Cc03_g01420 Coffea canephora HOM05D007336 ORTHO05D009339 7.3e-33 144.1 118 61.9
FvH4_6g06960 Fragaria vesca HOM05D007336 ORTHO05D009339 7.3e-33 144.1 121 57.0
RcHm_v2.0_Chr3g0456501 Rosa chinensis HOM05D007336 ORTHO05D009339 9.6e-33 143.7 121 55.4
SalBow2G0618 Salvia bowleyana HOM05D007336 ORTHO05D009339 9.6e-33 143.7 118 58.5
Lj1g0024848 Lotus japonicus HOM05D007336 ORTHO05D009339 1.2e-32 143.3 113 55.8
FAN05G1709 Fragaria x ananassa HOM05D007336 ORTHO05D009339 1.6e-32 142.9 121 56.2
FAN05G3591 Fragaria x ananassa HOM05D007336 ORTHO05D009339 1.6e-32 142.9 121 56.2
SEGI_32823 Sequoiadendron giganteum HOM05D007336 ORTHO05D009339 2.1e-32 142.5 115 61.7
AUR62018066 Chenopodium quinoa HOM05D007336 ORTHO05D009339 4.7e-32 141.4 120 57.5
Eucgr.H03264 Eucalyptus grandis HOM05D007336 ORTHO05D009339 4.7e-32 141.4 117 55.6
AUR62015269 Chenopodium quinoa HOM05D007336 ORTHO05D009339 8.1e-32 140.6 120 57.5
DCAR_030493 Daucus carota HOM05D007336 ORTHO05D009339 8.1e-32 140.6 121 57.9
CSS0001044 Camellia sinensis var. sinensis HOM05D007336 ORTHO05D009339 1.8e-31 139.4 118 58.5
AL1G65880 Arabidopsis lyrata HOM05D007336 ORTHO05D009339 4.0e-31 138.3 115 57.4
FAN02G4454 Fragaria x ananassa HOM05D007336 ORTHO05D009339 6.8e-31 137.5 131 54.2
EL10Ac3g06656 Beta vulgaris HOM05D007336 ORTHO05D009339 8.9e-31 137.1 118 55.9
Medtr7g112530 Medicago truncatula HOM05D007336 ORTHO05D009339 8.9e-31 137.1 112 52.7
SGA_v2.0_scaffold104G30104 Striga asiatica HOM05D007336 ORTHO05D009339 8.9e-31 137.1 118 59.3
Aa31LG2G11600 Aethionema arabicum HOM05D007336 ORTHO05D009339 1.2e-30 136.7 115 56.5
TPR.G39916 Trifolium pratense HOM05D007336 ORTHO05D009339 1.2e-30 136.7 111 56.8
Nitab4.5_0000306g0320 Nicotiana tabacum HOM05D007336 ORTHO05D009339 2.6e-30 135.6 112 58.9
Sc19g0005520 Simmondsia chinensis HOM05D007336 ORTHO05D009339 3.4e-30 135.2 121 56.2
Thhalv10023757m.g Eutrema salsugineum HOM05D007336 ORTHO05D009339 4.4e-30 134.8 122 54.9
BcaB04g20156 Brassica carinata HOM05D007336 ORTHO05D009339 5.8e-30 134.4 115 55.7
A01p27330 Brassica napus HOM05D007336 ORTHO05D009339 5.8e-30 134.4 115 55.7
C01p35170 Brassica napus HOM05D007336 ORTHO05D009339 5.8e-30 134.4 115 55.7
BolC1t03475H Brassica oleracea HOM05D007336 ORTHO05D009339 5.8e-30 134.4 115 55.7
BraA01t02872Z Brassica rapa HOM05D007336 ORTHO05D009339 5.8e-30 134.4 115 55.7
Hund20531 Selenicereus undatus HOM05D007336 ORTHO05D009339 9.9e-30 133.7 120 53.3
AT1G56260 Arabidopsis thaliana HOM05D007336 ORTHO05D009339 2.2e-29 132.5 116 56.9
PGSC0003DMG400006241 Solanum tuberosum HOM05D007336 ORTHO05D009339 2.9e-29 132.1 112 60.7
CAN.G14.12 Capsicum annuum HOM05D007336 ORTHO05D009339 3.8e-29 131.7 112 59.8
Gohir.A11G270600 Gossypium hirsutum HOM05D007336 ORTHO05D009339 3.8e-29 131.7 107 65.4
Peaxi162Scf00065g01021 Petunia axillaris HOM05D007336 ORTHO05D009339 4.9e-29 131.3 112 58.9
Carub.0002s0790 Capsella rubella HOM05D007336 ORTHO05D009339 1.1e-28 130.2 116 53.4
CARHR289820 Cardamine hirsuta HOM05D007336 ORTHO05D009339 1.4e-28 129.8 115 53.0
ATR0693G059 Amborella trichopoda HOM05D007336 ORTHO05D009339 2.1e-27 125.9 85 68.2
BcaC09g49567 Brassica carinata HOM05D007336 ORTHO05D009339 2.1e-27 125.9 115 54.8
Sp2g06650 Schrenkiella parvula HOM05D007336 ORTHO05D009339 2.1e-27 125.9 115 53.9
Nitab4.5_0002755g0010 Nicotiana tabacum HOM05D007336 ORTHO05D009339 4.6e-27 124.8 129 51.9
Pp3c22_13440 Physcomitrium patens HOM05D007336 ORTHO05D009339 4.6e-27 124.8 118 49.2
Solyc01g065710.3 Solanum lycopersicum HOM05D007336 ORTHO05D009339 6.0e-27 124.4 112 58.9
Sopen01g027110 Solanum pennellii HOM05D007336 ORTHO05D009339 6.0e-27 124.4 112 58.9
QL03p019121 Quercus lobata HOM05D007336 ORTHO05D009339 1.3e-26 123.2 89 62.9
AagrBONN_evm.TU.Sc2ySwM_344.3688 Anthoceros agrestis HOM05D007336 ORTHO05D009339 6.6e-26 120.9 114 53.5
PSO832G0037 Papaver somniferum HOM05D007336 ORTHO05D009339 1.1e-25 120.2 117 45.3
Sed0016582 Sechium edule HOM05D007336 ORTHO05D009339 1.9e-25 119.4 84 65.5
Nn4g25729 Nelumbo nucifera HOM05D007336 ORTHO05D009339 5.6e-25 117.9 86 67.4
Prupe.2G221300 Prunus persica HOM05D007336 ORTHO05D009339 1.6e-24 116.3 90 57.8
Eucgr.H03263 Eucalyptus grandis HOM05D007336 ORTHO05D009339 2.8e-24 115.5 87 60.9
Eucgr.H03265 Eucalyptus grandis HOM05D007336 ORTHO05D009339 1.8e-23 112.8 87 59.8
Eucgr.L02901 Eucalyptus grandis HOM05D007336 ORTHO05D009339 1.8e-23 112.8 87 59.8
unitig_46.g18696 Utricularia gibba HOM05D007336 ORTHO05D009339 1.8e-23 112.8 110 52.7
HanXRQChr13g0413951 Helianthus annuus HOM05D007336 ORTHO05D009339 6.9e-23 110.9 83 63.9
VMungo1383G0834 Vigna mungo HOM05D007336 ORTHO05D009339 1.5e-22 109.8 84 57.1
Cpa.g.sc48.123 Carica papaya HOM05D007336 ORTHO05D009339 2.0e-22 109.4 203 36.0
Ah.04g153680 Amaranthus hybridus HOM05D007336 ORTHO05D009339 2.9e-21 105.5 90 56.7
SMO137G0008 Selaginella moellendorffii HOM05D007336 ORTHO05D009339 2.7e-19 99.0 109 51.4
Glyma.03G233600 Glycine max HOM05D007336 ORTHO05D009339 6.6e-18 94.4 82 54.9
Prupe.3G209800 Prunus persica HOM05D007336 ORTHO05D009339 6.6e-18 94.4 103 47.6
Oeu031988.1 Olea europaea HOM05D007336 ORTHO05D009339 3.3e-17 92.0 86 55.8
Mapoly0064s0018 Marchantia polymorpha HOM05D007336 ORTHO05D009339 6.4e-13 77.8 74 54.1


User provided reference genes

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