Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_013721 Vanilla planifolia HOM05D002674 ORTHO05D008041 4.4e-95 351.3 179 100.0
MELO3C017957.2 Cucumis melo HOM05D002674 ORTHO05D008041 8.5e-22 107.8 177 40.1
vmacro02452 Vaccinium macrocarpon HOM05D002674 ORTHO05D008041 8.5e-22 107.8 177 42.9
ClCG10G010910 Citrullus lanatus HOM05D002674 ORTHO05D008041 2.5e-21 106.3 179 39.7
Dinv19696 Davidia involucrata HOM05D002674 ORTHO05D008041 5.5e-21 105.1 175 41.1
Rhsim13G0010400 Rhododendron simsii HOM05D002674 ORTHO05D008041 5.5e-21 105.1 176 42.6
Potri.014G129800 Populus trichocarpa HOM05D002674 ORTHO05D008041 7.2e-21 104.8 178 39.9
Sabra02G0154500 Salix brachista HOM05D002674 ORTHO05D008041 1.6e-20 103.6 178 39.3
Sed0019690 Sechium edule HOM05D002674 ORTHO05D008041 1.6e-20 103.6 177 39.5
CiPaw.07G108500 Carya illinoinensis HOM05D002674 ORTHO05D008041 2.1e-20 103.2 171 40.9
CsaV3_4G000790 Cucumis sativus L. HOM05D002674 ORTHO05D008041 2.7e-20 102.8 177 38.4
QL12p028510 Quercus lobata HOM05D002674 ORTHO05D008041 2.7e-20 102.8 171 39.2
CDE12G0521 Ceratophyllum demersum HOM05D002674 ORTHO05D008041 3.6e-20 102.4 176 40.3
Gohir.D08G085400 Gossypium hirsutum HOM05D002674 ORTHO05D008041 3.6e-20 102.4 175 40.0
Gorai.004G089900 Gossypium raimondii HOM05D002674 ORTHO05D008041 3.6e-20 102.4 122 50.8
Gohir.A08G076000 Gossypium hirsutum HOM05D002674 ORTHO05D008041 4.7e-20 102.1 175 39.4
Oeu048338.1 Olea europaea HOM05D002674 ORTHO05D008041 4.7e-20 102.1 177 39.0
SalBow3G0298 Salvia bowleyana HOM05D002674 ORTHO05D008041 4.7e-20 102.1 178 40.4
arahy.Tifrunner.gnm1.ann1.9NAT9F Arachis hypogaea HOM05D002674 ORTHO05D008041 6.1e-20 101.7 174 37.9
arahy.Tifrunner.gnm1.ann1.UV7MYU Arachis hypogaea HOM05D002674 ORTHO05D008041 6.1e-20 101.7 174 37.9
Dinv33053 Davidia involucrata HOM05D002674 ORTHO05D007700 6.1e-20 101.7 176 39.8
Nn3g21482 Nelumbo nucifera HOM05D002674 ORTHO05D008041 6.1e-20 101.7 182 40.1
SalBow3G1515 Salvia bowleyana HOM05D002674 ORTHO05D008041 6.1e-20 101.7 83 65.1
TAR636G2182 Trochodendron aralioides HOM05D002674 ORTHO05D008041 8.0e-20 101.3 176 39.2
MSTRG.21632 Avicennia marina HOM05D002674 ORTHO05D008041 1.4e-19 100.5 179 39.1
SGA_v2.0_scaffold2G01395 Striga asiatica HOM05D002674 ORTHO05D008041 1.4e-19 100.5 179 38.0
Peaxi162Scf00001g00445 Petunia axillaris HOM05D002674 ORTHO05D008041 1.8e-19 100.1 176 38.6
Lj5g0008305 Lotus japonicus HOM05D002674 ORTHO05D008041 2.3e-19 99.8 176 38.1
Nitab4.5_0008207g0030 Nicotiana tabacum HOM05D002674 ORTHO05D008041 2.3e-19 99.8 176 39.2
Thecc.01G300000 Theobroma cacao HOM05D002674 ORTHO05D008041 2.3e-19 99.8 176 39.2
Actinidia32214 Actinidia chinensis HOM05D002674 ORTHO05D008041 3.0e-19 99.4 176 38.6
CANSAT25G0502 Cannabis sativa HOM05D002674 ORTHO05D008041 3.0e-19 99.4 174 36.2
Nitab4.5_0001879g0010 Nicotiana tabacum HOM05D002674 ORTHO05D008041 3.0e-19 99.4 174 39.1
SalBow5G2922 Salvia bowleyana HOM05D002674 ORTHO05D008041 3.0e-19 99.4 93 58.1
PGSC0003DMG400011376 Solanum tuberosum HOM05D002674 ORTHO05D008041 3.0e-19 99.4 176 38.6
unitig_61.g26303 Utricularia gibba HOM05D002674 ORTHO05D008041 3.0e-19 99.4 79 63.3
VMungo0720G1979 Vigna mungo HOM05D002674 ORTHO05D008041 3.0e-19 99.4 177 37.9
Solyc09g075100.3 Solanum lycopersicum HOM05D002674 ORTHO05D008041 4.0e-19 99.0 176 38.6
Sopen09g029920 Solanum pennellii HOM05D002674 ORTHO05D008041 4.0e-19 99.0 176 38.6
Duzib138G1033 Durio zibethinus HOM05D002674 ORTHO05D008041 5.2e-19 98.6 77 63.6
GSVIVG01028011001 Vitis vinifera HOM05D002674 ORTHO05D008041 5.2e-19 98.6 79 63.3
CAN.G472.1 Capsicum annuum HOM05D002674 ORTHO05D008041 6.8e-19 98.2 176 38.1
MBI19_g25355_MAGBIO Magnolia biondii HOM05D002674 ORTHO05D008041 6.8e-19 98.2 177 38.4
Phvul.007G146200 Phaseolus vulgaris HOM05D002674 ORTHO05D008041 6.8e-19 98.2 176 37.5
FvH4_2g25692 Fragaria vesca HOM05D002674 ORTHO05D008041 8.8e-19 97.8 174 39.1
TWI14G1447 Tripterygium wilfordii HOM05D002674 ORTHO05D008041 8.8e-19 97.8 176 38.6
CSS0018179 Camellia sinensis var. sinensis HOM05D002674 ORTHO05D008041 1.2e-18 97.4 183 38.3
Cc01_g20820 Coffea canephora HOM05D002674 ORTHO05D008041 1.2e-18 97.4 81 64.2
Duzib133G1209 Durio zibethinus HOM05D002674 ORTHO05D007700 1.2e-18 97.4 176 38.1
HanXRQChr15g0465661 Helianthus annuus HOM05D002674 ORTHO05D008041 1.2e-18 97.4 179 36.9
Aqoxy5G00753 Aquilegia oxysepala HOM05D002674 ORTHO05D008041 1.5e-18 97.1 174 37.4
CDE01G0164 Ceratophyllum demersum HOM05D002674 ORTHO05D008041 1.5e-18 97.1 79 65.8
Haze_04934 Corylus avellana HOM05D002674 ORTHO05D008041 1.5e-18 97.1 171 37.4
ATR0796G030 Amborella trichopoda HOM05D002674 ORTHO05D008041 2.0e-18 96.7 79 62.0
Cpa.g.sc9.264 Carica papaya HOM05D002674 ORTHO05D008041 2.0e-18 96.7 176 38.1
FvH4_3g17380 Fragaria vesca HOM05D002674 ORTHO05D008041 2.0e-18 96.7 173 38.2
FAN11G2206 Fragaria x ananassa HOM05D002674 ORTHO05D008041 2.0e-18 96.7 173 38.2
Glyma.10G018500 Glycine max HOM05D002674 ORTHO05D008041 2.0e-18 96.7 180 37.2
Haze_04957 Corylus avellana HOM05D002674 ORTHO05D008041 2.6e-18 96.3 76 61.8
FAN21G2416 Fragaria x ananassa HOM05D002674 ORTHO05D008041 2.6e-18 96.3 173 38.2
RcHm_v2.0_Chr6g0293971 Rosa chinensis HOM05D002674 ORTHO05D008041 2.6e-18 96.3 76 64.5
Cfa005915 Carpinus fangiana HOM05D002674 ORTHO05D008041 3.4e-18 95.9 76 60.5
Ca_10338_v3 Cicer arietinum L. HOM05D002674 ORTHO05D008041 3.4e-18 95.9 180 38.3
ECA247G1692 Erigeron canadensis HOM05D002674 ORTHO05D008041 3.4e-18 95.9 76 63.2
Lsat_1_v5_gn_9_5640 Lactuca sativa HOM05D002674 ORTHO05D008643 3.4e-18 95.9 79 60.8
Ciclev10022953m.g Citrus clementina HOM05D002674 ORTHO05D008041 4.4e-18 95.5 178 37.1
COL.COLO4_23349 Corchorus olitorius HOM05D002674 ORTHO05D008041 4.4e-18 95.5 176 38.1
FAN16G1943 Fragaria x ananassa HOM05D002674 ORTHO05D008041 5.7e-18 95.1 173 37.6
AUR62008625 Chenopodium quinoa HOM05D002674 ORTHO05D008041 9.8e-18 94.4 179 35.8
FAN25G1445 Fragaria x ananassa HOM05D002674 ORTHO05D008041 9.8e-18 94.4 76 63.2
Lalb_Chr21g0306851 Lupinus albus HOM05D002674 ORTHO05D008041 9.8e-18 94.4 179 37.4
Atru.chr5.1150 Acer truncatum HOM05D002674 ORTHO05D008041 1.3e-17 94.0 174 37.4
AUR62033146 Chenopodium quinoa HOM05D002674 ORTHO05D008041 1.3e-17 94.0 179 35.8
Eucgr.H01115 Eucalyptus grandis HOM05D002674 ORTHO05D008041 1.7e-17 93.6 176 36.9
PGR119G0614 Punica granatum HOM05D002674 ORTHO05D008041 1.7e-17 93.6 171 37.4
Atru.chr7.1564 Acer truncatum HOM05D002674 ORTHO05D008041 2.2e-17 93.2 176 36.9
Prupe.8G261100 Prunus persica HOM05D002674 ORTHO05D008041 2.8e-17 92.8 76 61.8
BcaC02g10314 Brassica carinata HOM05D002674 ORTHO05D008041 4.8e-17 92.0 79 59.5
A04p00510 Brassica napus HOM05D002674 ORTHO05D008041 4.8e-17 92.0 79 59.5
BolC4t24576H Brassica oleracea HOM05D002674 ORTHO05D008041 4.8e-17 92.0 79 59.5
BraA04t15771Z Brassica rapa HOM05D002674 ORTHO05D008041 4.8e-17 92.0 79 59.5
Hund18156 Selenicereus undatus HOM05D002674 ORTHO05D008041 4.8e-17 92.0 174 37.4
Psat6g166360 Pisum sativum HOM05D002674 ORTHO05D008041 6.3e-17 91.7 176 36.9
Manes.01G218700 Manihot esculenta HOM05D002674 ORTHO05D008041 8.3e-17 91.3 79 60.8
Migut.D00216 Erythranthe guttata HOM05D002674 ORTHO05D008041 1.1e-16 90.9 179 36.3
PSO210G6076 Papaver somniferum HOM05D002674 ORTHO05D008041 1.1e-16 90.9 76 60.5
PGR044G1069 Punica granatum HOM05D002674 ORTHO05D008041 1.1e-16 90.9 77 62.3
TWI23G1311 Tripterygium wilfordii HOM05D002674 ORTHO05D008041 1.1e-16 90.9 176 36.9
Os05g0363600 Oryza sativa ssp. japonica HOM05D002674 ORTHO05D008041 1.8e-16 90.1 174 36.2
EL10Ac7g17468 Beta vulgaris HOM05D002674 ORTHO05D008041 2.4e-16 89.7 176 35.2
Hma1.2p1_0491F.1_g164520 Hydrangea macrophylla HOM05D002674 ORTHO05D008041 2.4e-16 89.7 75 61.3
PSO832G1306 Papaver somniferum HOM05D002674 ORTHO05D008041 2.4e-16 89.7 76 59.2
Sp5g00710 Schrenkiella parvula HOM05D002674 ORTHO05D008041 2.4e-16 89.7 76 60.5
C04p30420 Brassica napus HOM05D002674 ORTHO05D008041 4.1e-16 89.0 79 58.2
Sc24g0003780 Simmondsia chinensis HOM05D002674 ORTHO05D008041 5.4e-16 88.6 82 53.7
Thhalv10006327m.g Eutrema salsugineum HOM05D002674 ORTHO05D008041 7.0e-16 88.2 76 60.5
Aa31LG10G16570 Aethionema arabicum HOM05D002674 ORTHO05D008041 9.1e-16 87.8 76 59.2
AT3G62810 Arabidopsis thaliana HOM05D002674 ORTHO05D008041 9.1e-16 87.8 76 59.2
BcaB02g08097 Brassica carinata HOM05D002674 ORTHO05D008041 9.1e-16 87.8 77 59.7
AL5G45590 Arabidopsis lyrata HOM05D002674 ORTHO05D008041 1.2e-15 87.4 76 59.2
MD11G1310400 Malus domestica HOM05D002674 ORTHO05D008041 1.2e-15 87.4 76 56.6
Ah.15g093210 Amaranthus hybridus HOM05D002674 ORTHO05D008041 1.6e-15 87.0 195 35.4
DCAR_002831 Daucus carota HOM05D000067 ORTHO05D001807 2.0e-15 86.7 88 51.1
BcaC07g42733 Brassica carinata HOM05D002674 ORTHO05D008041 2.7e-15 86.3 76 59.2
Carub.0005s2947 Capsella rubella HOM05D002674 ORTHO05D008041 2.7e-15 86.3 76 57.9
Glyma.02G018200 Glycine max HOM05D002674 ORTHO05D008041 4.5e-15 85.5 75 56.0
TPR.G34008 Trifolium pratense HOM05D002674 ORTHO05D008041 5.9e-15 85.1 176 35.8
Zm00001eb346590 Zea mays HOM05D002674 ORTHO05D008041 7.7e-15 84.7 174 33.9
MD03G1287900 Malus domestica HOM05D002674 ORTHO05D008041 1.3e-14 84.0 76 52.6
BraA09t40877Z Brassica rapa HOM05D002674 ORTHO05D008041 1.7e-14 83.6 76 59.2
Medtr1g088550 Medicago truncatula HOM05D002674 ORTHO05D008041 1.7e-14 83.6 176 33.5
CARHR173080 Cardamine hirsuta HOM05D002674 ORTHO05D008041 2.2e-14 83.2 76 56.6
SEGI_38702 Sequoiadendron giganteum HOM05D002674 ORTHO05D008041 3.2e-13 79.3 79 50.6
A09p54660 Brassica napus HOM05D002674 ORTHO05D008041 5.5e-13 78.6 76 57.9
Oeu010670.1 Olea europaea HOM05D002674 ORTHO05D008041 9.4e-13 77.8 78 53.8
Lalb_Chr02g0143261 Lupinus albus HOM05D000266 ORTHO05D008041 4.7e-12 75.5 170 34.1
Sabra14G0096400 Salix brachista HOM05D002674 ORTHO05D008041 8.8e-11 71.2 76 50.0
Pp3c9_7930 Physcomitrium patens HOM05D002674 ORTHO05D008041 9.1e-08 61.2 82 42.7
RcHm_v2.0_Chr2g0146991 Rosa chinensis HOM05D002674 ORTHO05D008041 1.2e-07 60.8 54 59.3
Mapoly0061s0038 Marchantia polymorpha HOM05D002674 ORTHO05D008041 4.5e-07 58.9 76 39.5
C08p37560 Brassica napus HOM05D002674 ORTHO05D008041 2.3e-06 56.6 54 57.4
PSO832G3862 Papaver somniferum HOM05D001297 ORTHO05D001135 5.0e-06 55.5 73 42.5
Peaxi162Scf00545g00027 Petunia axillaris HOM05D002674 ORTHO05D008041 8.6e-06 54.7 50 46.0


User provided reference genes

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