Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_013697 Vanilla planifolia HOM05D005247 ORTHO05D006571 4.6e-91 337.8 164 100.0
Nn7g38324 Nelumbo nucifera HOM05D005247 ORTHO05D006571 2.3e-42 176.0 181 47.0
Prupe.1G141100 Prunus persica HOM05D005247 ORTHO05D006571 4.0e-42 175.3 181 47.0
MD13G1173000 Malus domestica HOM05D005247 ORTHO05D006571 5.2e-42 174.9 181 45.3
MD16G1174400 Malus domestica HOM05D005247 ORTHO05D006571 5.2e-42 174.9 181 45.3
Duzib151G0039 Durio zibethinus HOM05D005247 ORTHO05D006571 6.8e-42 174.5 181 45.9
CSS0036429 Camellia sinensis var. sinensis HOM05D005247 ORTHO05D006571 2.6e-41 172.6 181 47.0
Eucgr.H03774 Eucalyptus grandis HOM05D005247 ORTHO05D006571 3.4e-41 172.2 181 47.0
AUR62040732 Chenopodium quinoa HOM05D005247 ORTHO05D006571 5.8e-41 171.4 181 47.0
PGR142G1936 Punica granatum HOM05D005247 ORTHO05D006571 5.8e-41 171.4 182 47.3
Lalb_Chr12g0196461 Lupinus albus HOM05D005247 ORTHO05D006571 7.5e-41 171.0 179 47.5
Aqoxy5G00647 Aquilegia oxysepala HOM05D005247 ORTHO05D006571 1.3e-40 170.2 181 46.4
Cfa015350 Carpinus fangiana HOM05D005247 ORTHO05D006571 1.7e-40 169.9 181 46.4
QL06p007567 Quercus lobata HOM05D005247 ORTHO05D006571 2.2e-40 169.5 181 45.3
Hma1.2p1_0078F.1_g040780 Hydrangea macrophylla HOM05D005247 ORTHO05D006571 3.7e-40 168.7 179 45.8
Rhsim04G0216900 Rhododendron simsii HOM05D005247 ORTHO05D006571 3.7e-40 168.7 181 44.8
Potri.008G205300 Populus trichocarpa HOM05D005247 ORTHO05D006571 4.9e-40 168.3 181 44.8
VMungo1215G2055 Vigna mungo HOM05D005247 ORTHO05D006571 4.9e-40 168.3 179 46.4
CANSAT78G0941 Cannabis sativa HOM05D005247 ORTHO05D006571 6.4e-40 167.9 181 44.2
CiPaw.02G086000 Carya illinoinensis HOM05D005247 ORTHO05D006571 6.4e-40 167.9 181 44.8
Phvul.003G101400 Phaseolus vulgaris HOM05D005247 ORTHO05D006571 6.4e-40 167.9 179 46.4
Thecc.04G278500 Theobroma cacao HOM05D005247 ORTHO05D006571 6.4e-40 167.9 181 44.8
Carub.0007s2616 Capsella rubella HOM05D005247 ORTHO05D006571 8.3e-40 167.5 181 42.5
Medtr3g069790 Medicago truncatula HOM05D005247 ORTHO05D006571 8.3e-40 167.5 179 46.9
Actinidia23422 Actinidia chinensis HOM05D005247 ORTHO05D006571 2.4e-39 166.0 181 44.8
AL7G39790 Arabidopsis lyrata HOM05D005247 ORTHO05D006571 4.1e-39 165.2 181 42.5
Psat5g125320 Pisum sativum HOM05D005247 ORTHO05D006571 4.1e-39 165.2 181 45.9
AUR62043783 Chenopodium quinoa HOM05D005247 ORTHO05D006571 5.4e-39 164.9 181 45.9
Thhalv10025397m.g Eutrema salsugineum HOM05D005247 ORTHO05D006571 5.4e-39 164.9 181 42.5
FvH4_4g17340 Fragaria vesca HOM05D005247 ORTHO05D006571 5.4e-39 164.9 180 46.1
AT4G15640 Arabidopsis thaliana HOM05D005247 ORTHO05D006571 7.0e-39 164.5 181 42.0
ECA234G2791 Erigeron canadensis HOM05D005247 ORTHO05D006571 1.2e-38 163.7 181 43.6
Lsat_1_v5_gn_4_34220 Lactuca sativa HOM05D005247 ORTHO05D006571 1.2e-38 163.7 181 43.6
RcHm_v2.0_Chr4g0421281 Rosa chinensis HOM05D005247 ORTHO05D006571 1.2e-38 163.7 182 45.1
BcaB06g26247 Brassica carinata HOM05D005247 ORTHO05D006571 2.0e-38 162.9 181 42.5
TAR362G0112 Trochodendron aralioides HOM05D005247 ORTHO05D006571 2.0e-38 162.9 181 45.9
Gohir.A09G233900 Gossypium hirsutum HOM05D005247 ORTHO05D006571 2.7e-38 162.5 181 43.6
Zm00001eb330100 Zea mays HOM05D005247 ORTHO05D006571 3.5e-38 162.2 181 43.6
BcaC05g28162 Brassica carinata HOM05D005247 ORTHO05D006571 4.6e-38 161.8 181 42.5
C05p41980 Brassica napus HOM05D005247 ORTHO05D006571 4.6e-38 161.8 181 42.5
BolC5t32932H Brassica oleracea HOM05D005247 ORTHO05D006571 4.6e-38 161.8 181 42.5
Os07g0668200 Oryza sativa ssp. japonica HOM05D005247 ORTHO05D006571 4.6e-38 161.8 181 43.6
Sp3g19500 Schrenkiella parvula HOM05D005247 ORTHO05D006571 4.6e-38 161.8 181 42.0
Glyma.07G251000 Glycine max HOM05D005247 ORTHO05D006571 6.0e-38 161.4 179 45.8
Sc13g0003580 Simmondsia chinensis HOM05D005247 ORTHO05D006571 6.0e-38 161.4 182 44.0
GSVIVG01017794001 Vitis vinifera HOM05D005247 ORTHO05D006571 6.0e-38 161.4 181 44.2
CARHR290040 Cardamine hirsuta HOM05D005247 ORTHO05D006571 7.8e-38 161.0 181 40.3
FAN07G0437 Fragaria x ananassa HOM05D005247 ORTHO05D006571 7.8e-38 161.0 180 45.0
Sp7g13890 Schrenkiella parvula HOM05D005247 ORTHO05D006571 7.8e-38 161.0 181 42.0
TPR.G28788 Trifolium pratense HOM05D005247 ORTHO05D006571 7.8e-38 161.0 179 43.6
A05p27200 Brassica napus HOM05D005247 ORTHO05D006571 1.0e-37 160.6 181 42.5
BraA05t21609Z Brassica rapa HOM05D005247 ORTHO05D006571 1.0e-37 160.6 181 42.5
AL3G35540 Arabidopsis lyrata HOM05D005247 ORTHO05D006571 1.3e-37 160.2 181 42.0
Glyma.17G023300 Glycine max HOM05D005247 ORTHO05D006571 1.3e-37 160.2 179 44.1
THA.LOC104802559 Tarenaya hassleriana HOM05D005247 ORTHO05D006571 1.3e-37 160.2 181 40.9
PSO541G1846 Papaver somniferum HOM05D005247 ORTHO05D006571 1.7e-37 159.8 182 43.4
EL10Ac3g06569 Beta vulgaris HOM05D005247 ORTHO05D006571 3.0e-37 159.1 180 43.9
Gohir.D09G234700 Gossypium hirsutum HOM05D005247 ORTHO05D006571 3.0e-37 159.1 180 43.3
Gorai.006G257600 Gossypium raimondii HOM05D005247 ORTHO05D006571 3.0e-37 159.1 180 43.3
TPR.G29803 Trifolium pratense HOM05D005247 ORTHO05D006571 3.9e-37 158.7 176 46.0
Lj4g0024405 Lotus japonicus HOM05D005247 ORTHO05D006571 5.0e-37 158.3 179 45.8
Atru.chr4.2766 Acer truncatum HOM05D005247 ORTHO05D006571 6.6e-37 157.9 181 43.1
FAN17G1560 Fragaria x ananassa HOM05D005247 ORTHO05D006571 8.6e-37 157.5 188 44.1
Ca_21545_v3 Cicer arietinum L. HOM05D005247 ORTHO05D006571 2.5e-36 156.0 179 44.1
Manes.15G016200 Manihot esculenta HOM05D005247 ORTHO05D006571 3.3e-36 155.6 181 43.1
HanXRQChr17g0562111 Helianthus annuus HOM05D005247 ORTHO05D006571 4.3e-36 155.2 181 43.1
Nitab4.5_0001357g0080 Nicotiana tabacum HOM05D005247 ORTHO05D006571 4.3e-36 155.2 179 40.2
FAN12G3211 Fragaria x ananassa HOM05D005247 ORTHO05D006571 5.6e-36 154.8 184 44.0
PSO675G0879 Papaver somniferum HOM05D005247 ORTHO05D006571 1.2e-35 153.7 181 43.1
TWI09G0062 Tripterygium wilfordii HOM05D005247 ORTHO05D006571 1.2e-35 153.7 177 42.9
Ah.13g074520 Amaranthus hybridus HOM05D005247 ORTHO05D006571 1.6e-35 153.3 181 40.9
AT3G21465 Arabidopsis thaliana HOM05D005247 ORTHO05D006571 1.6e-35 153.3 181 40.3
Solyc07g041930.3 Solanum lycopersicum HOM05D005247 ORTHO05D006571 1.6e-35 153.3 179 40.8
Aa31LG9G1800 Aethionema arabicum HOM05D005247 ORTHO05D006571 2.1e-35 152.9 181 39.8
vmacro08197 Vaccinium macrocarpon HOM05D005247 ORTHO05D006571 2.1e-35 152.9 199 40.7
Nitab4.5_0000343g0170 Nicotiana tabacum HOM05D005247 ORTHO05D006571 2.8e-35 152.5 179 40.2
Nitab4.5_0006478g0050 Nicotiana tabacum HOM05D005247 ORTHO05D006571 2.8e-35 152.5 179 40.2
Sopen07g021430 Solanum pennellii HOM05D005247 ORTHO05D006571 6.2e-35 151.4 179 40.8
Carub.0003s2149 Capsella rubella HOM05D005247 ORTHO05D006571 1.1e-34 150.6 186 39.2
Peaxi162Scf00127g00146 Petunia axillaris HOM05D005247 ORTHO05D006571 1.8e-34 149.8 179 39.7
SGA_v2.0_scaffold89G27537 Striga asiatica HOM05D005247 ORTHO05D006571 3.1e-34 149.1 180 42.8
CAN.G311.32 Capsicum annuum HOM05D005247 ORTHO05D006571 6.8e-34 147.9 179 40.2
Nitab4.5_0009436g0020 Nicotiana tabacum HOM05D005247 ORTHO05D006571 6.8e-34 147.9 179 39.1
Cpa.g.sc16.124 Carica papaya HOM05D005247 ORTHO05D006571 2.6e-33 146.0 173 41.6
arahy.Tifrunner.gnm1.ann1.A4UT9N Arachis hypogaea HOM05D005247 ORTHO05D006571 4.4e-33 145.2 181 44.2
MSTRG.21809 Avicennia marina HOM05D005247 ORTHO05D006571 5.8e-33 144.8 179 39.7
Cc03_g02260 Coffea canephora HOM05D005247 ORTHO05D006571 1.3e-32 143.7 182 42.3
FAN12G4219 Fragaria x ananassa HOM05D005247 ORTHO05D006571 1.3e-32 143.7 206 39.3
TAR633G1275 Trochodendron aralioides HOM05D005247 ORTHO05D006571 1.7e-32 143.3 115 56.5
arahy.Tifrunner.gnm1.ann1.8Y06GW Arachis hypogaea HOM05D005247 ORTHO05D006571 2.2e-32 142.9 181 43.1
Haze_01257 Corylus avellana HOM05D005247 ORTHO05D006571 2.2e-32 142.9 233 35.2
Thhalv10021000m.g Eutrema salsugineum HOM05D005247 ORTHO05D006571 2.2e-32 142.9 185 37.8
ATR0706G238 Amborella trichopoda HOM05D005247 ORTHO05D006571 2.9e-32 142.5 183 40.4
COL.COLO4_13921 Corchorus olitorius HOM05D005247 ORTHO05D006571 2.9e-32 142.5 145 46.2
CsaV3_3G014210 Cucumis sativus L. HOM05D005247 ORTHO05D006571 2.9e-32 142.5 177 41.2
Ciclev10005079m.g Citrus clementina HOM05D005247 ORTHO05D006571 1.9e-31 139.8 148 44.6
SGA_v2.0_scaffold175G39318 Striga asiatica HOM05D005247 ORTHO05D006571 1.9e-31 139.8 180 40.6
ClCG05G005860 Citrullus lanatus HOM05D005247 ORTHO05D006571 4.1e-31 138.7 178 39.3
Sed0017520 Sechium edule HOM05D005247 ORTHO05D006571 5.4e-31 138.3 175 40.6
Migut.N00115 Erythranthe guttata HOM05D005247 ORTHO05D006571 7.0e-31 137.9 190 36.3
DCAR_024549 Daucus carota HOM05D005247 ORTHO05D006571 2.1e-30 136.3 181 38.1
Lj6A670T87 Lonicera japonica HOM05D005247 ORTHO05D006571 3.0e-29 132.5 109 56.9
Hma1.2p1_3003F.1_g331535 Hydrangea macrophylla HOM05D005247 ORTHO05D006571 2.5e-28 129.4 176 39.2
Eucgr.H03753 Eucalyptus grandis HOM05D005247 ORTHO05D006571 7.3e-28 127.9 103 56.3
Dinv38319 Davidia involucrata HOM05D005247 ORTHO05D006571 1.6e-27 126.7 115 51.3
unitig_748.g7195 Utricularia gibba HOM05D005247 ORTHO05D006571 1.4e-26 123.6 200 35.0
BraA08t33173Z Brassica rapa HOM05D005247 ORTHO05D006571 4.0e-26 122.1 115 49.6
Dinv44420 Davidia involucrata HOM05D005247 ORTHO05D006571 2.6e-25 119.4 92 56.5
Psat4g226360 Pisum sativum HOM05D005247 ORTHO05D006571 2.6e-25 119.4 151 42.4
BolC8t48291H Brassica oleracea HOM05D005247 ORTHO05D006571 4.4e-25 118.6 174 37.4
BcaB04g18303 Brassica carinata HOM05D005247 ORTHO05D006571 4.1e-23 112.1 91 53.8
MELO3C006614.2 Cucumis melo HOM05D005247 ORTHO05D006571 2.1e-22 109.8 95 50.5
SHI00299 Sapria himalayana HOM05D005247 ORTHO05D000987 1.8e-18 96.7 152 32.9
Psat6g103040 Pisum sativum HOM05D005247 ORTHO05D006571 9.9e-17 90.9 64 62.5
Sabra08G0156700 Salix brachista HOM05D005247 ORTHO05D006571 1.7e-16 90.1 116 38.8
vmacro08194 Vaccinium macrocarpon HOM05D005247 ORTHO05D006571 2.2e-16 89.7 129 39.5
Eucgr.C02045 Eucalyptus grandis HOM05D005247 ORTHO05D006571 4.9e-16 88.6 65 60.0
Sabra08G0156600 Salix brachista HOM05D005247 ORTHO05D006571 7.1e-15 84.7 66 59.1
Atru.chr4.2761 Acer truncatum HOM05D005247 ORTHO05D006571 1.6e-14 83.6 70 57.1
Hund20585 Selenicereus undatus HOM05D005247 ORTHO05D006571 1.6e-14 83.6 66 57.6
CAN.G640.20 Capsicum annuum HOM05D005247 ORTHO05D006571 7.8e-14 81.3 91 36.3
Pp3c14_15200 Physcomitrium patens HOM05D005247 ORTHO05D006571 4.3e-12 75.5 175 27.4
RcHm_v2.0_Chr4g0421891 Rosa chinensis HOM05D005247 ORTHO05D006571 5.8e-09 65.1 102 35.3
Actinidia40231 Actinidia chinensis HOM05D005247 ORTHO05D006571 2.4e-07 59.7 65 40.0
Eucgr.H03759 Eucalyptus grandis HOM05D005247 ORTHO05D006571 4.2e-07 58.9 67 40.3
RcHm_v2.0_Chr4g0421901 Rosa chinensis HOM05D005247 ORTHO05D006571 4.2e-07 58.9 39 61.5
FAN22G1325 Fragaria x ananassa HOM05D005247 ORTHO05D006571 1.6e-06 57.0 63 44.4


User provided reference genes

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