Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_013643 Vanilla planifolia HOM05D005570 ORTHO05D007368 1.9e-101 372.5 187 100.0
Actinidia07853 Actinidia chinensis HOM05D005570 ORTHO05D007368 3.4e-53 212.2 171 60.2
Rhsim04G0030600 Rhododendron simsii HOM05D005570 ORTHO05D007368 1.7e-52 209.9 171 60.8
MBI14_g24038_MAGBIO Magnolia biondii HOM05D005570 ORTHO05D007368 2.8e-52 209.1 150 68.7
Zm00001eb101470 Zea mays HOM05D005570 ORTHO05D007368 2.8e-52 209.1 173 61.8
ClCG06G018310 Citrullus lanatus HOM05D005570 ORTHO05D007368 3.7e-52 208.8 147 66.7
CsaV3_1G000130 Cucumis sativus L. HOM05D005570 ORTHO05D007368 6.3e-52 208.0 147 65.3
TAR374G1095 Trochodendron aralioides HOM05D005570 ORTHO05D007368 6.3e-52 208.0 169 59.8
Nn4g22113 Nelumbo nucifera HOM05D005570 ORTHO05D007368 8.3e-52 207.6 166 61.4
CSS0001120 Camellia sinensis var. sinensis HOM05D005570 ORTHO05D007368 3.1e-51 205.7 171 58.5
Duzib213G1053 Durio zibethinus HOM05D005570 ORTHO05D007368 3.1e-51 205.7 158 63.9
HanXRQChr03g0075001 Helianthus annuus HOM05D005570 ORTHO05D007368 4.1e-51 205.3 148 68.2
Cfa018716 Carpinus fangiana HOM05D005570 ORTHO05D007368 5.4e-51 204.9 165 60.6
Lsat_1_v5_gn_9_102501 Lactuca sativa HOM05D005570 ORTHO05D007368 5.4e-51 204.9 165 61.8
Manes.13G060500 Manihot esculenta HOM05D005570 ORTHO05D007368 7.0e-51 204.5 149 66.4
Sed0027705 Sechium edule HOM05D005570 ORTHO05D007368 1.2e-50 203.8 147 65.3
Lj9C217G3 Lonicera japonica HOM05D005570 ORTHO05D007368 1.6e-50 203.4 167 59.9
Os09g0478400 Oryza sativa ssp. japonica HOM05D005570 ORTHO05D007368 2.7e-50 202.6 150 66.0
Nitab4.5_0005354g0010 Nicotiana tabacum HOM05D005570 ORTHO05D007368 3.5e-50 202.2 170 57.1
Atru.chr6.3424 Acer truncatum HOM05D005570 ORTHO05D007368 4.5e-50 201.8 150 67.3
Peaxi162Scf00612g00133 Petunia axillaris HOM05D005570 ORTHO05D007368 4.5e-50 201.8 150 66.7
CiPaw.01G284700 Carya illinoinensis HOM05D005570 ORTHO05D007368 5.9e-50 201.4 175 57.1
Haze_07109 Corylus avellana HOM05D005570 ORTHO05D007368 5.9e-50 201.4 165 60.0
PGR044G2338 Punica granatum HOM05D005570 ORTHO05D007368 5.9e-50 201.4 147 67.3
Sc21g0000460 Simmondsia chinensis HOM05D005570 ORTHO05D007368 7.7e-50 201.1 149 66.4
MSTRG.12255 Avicennia marina HOM05D005570 ORTHO05D007368 1.0e-49 200.7 149 65.1
PGR031G1532 Punica granatum HOM05D005570 ORTHO05D007368 1.0e-49 200.7 145 68.3
Cc02_g29600 Coffea canephora HOM05D005570 ORTHO05D007368 1.3e-49 200.3 149 65.1
MD06G1132000 Malus domestica HOM05D005570 ORTHO05D007368 1.3e-49 200.3 168 60.7
Solyc07g042710.3 Solanum lycopersicum HOM05D005570 ORTHO05D007368 2.2e-49 199.5 148 64.9
Sopen07g023810 Solanum pennellii HOM05D005570 ORTHO05D007368 2.2e-49 199.5 148 64.9
Hma1.2p1_0599F.1_g187020 Hydrangea macrophylla HOM05D005570 ORTHO05D007368 2.9e-49 199.1 157 63.1
GSVIVG01018573001 Vitis vinifera HOM05D005570 ORTHO05D007368 2.9e-49 199.1 150 64.7
Nitab4.5_0005376g0020 Nicotiana tabacum HOM05D005570 ORTHO05D007368 3.8e-49 198.7 170 55.9
Eucgr.K01395 Eucalyptus grandis HOM05D005570 ORTHO05D007368 5.0e-49 198.4 164 61.6
Sp3g23170 Schrenkiella parvula HOM05D005570 ORTHO05D007368 8.5e-49 197.6 151 64.2
CSS0020937 Camellia sinensis var. sinensis HOM05D005570 ORTHO05D007368 1.1e-48 197.2 171 56.1
COL.COLO4_17467 Corchorus olitorius HOM05D005570 ORTHO05D007368 1.5e-48 196.8 151 62.3
BcaB06g26780 Brassica carinata HOM05D005570 ORTHO05D007368 1.9e-48 196.4 170 60.0
BraA07t28466Z Brassica rapa HOM05D005570 ORTHO05D007368 1.9e-48 196.4 170 60.0
Thecc.07G134300 Theobroma cacao HOM05D005570 ORTHO05D007368 1.9e-48 196.4 150 63.3
BcaC06g35864 Brassica carinata HOM05D005570 ORTHO05D007368 2.5e-48 196.1 151 64.2
A07p06720 Brassica napus HOM05D005570 ORTHO05D007368 2.5e-48 196.1 151 64.2
C07p10300 Brassica napus HOM05D005570 ORTHO05D007368 2.5e-48 196.1 151 64.2
BolC7t41480H Brassica oleracea HOM05D005570 ORTHO05D007368 2.5e-48 196.1 151 64.2
unitig_26.g9513 Utricularia gibba HOM05D005570 ORTHO05D007368 2.5e-48 196.1 169 55.6
AUR62019308 Chenopodium quinoa HOM05D005570 ORTHO05D007368 3.2e-48 195.7 165 60.0
AL3G42010 Arabidopsis lyrata HOM05D005570 ORTHO05D007368 4.2e-48 195.3 152 63.2
Gohir.D01G037900 Gossypium hirsutum HOM05D005570 ORTHO05D007368 4.2e-48 195.3 152 61.2
Gorai.002G046300 Gossypium raimondii HOM05D005570 ORTHO05D007368 4.2e-48 195.3 152 61.2
Gohir.A01G047200 Gossypium hirsutum HOM05D005570 ORTHO05D007368 5.5e-48 194.9 152 61.8
PSO063G1837 Papaver somniferum HOM05D005570 ORTHO05D007368 7.2e-48 194.5 172 58.1
TWI18G0239 Tripterygium wilfordii HOM05D005570 ORTHO05D007368 7.2e-48 194.5 169 56.2
Ciclev10016955m.g Citrus clementina HOM05D005570 ORTHO05D007368 9.4e-48 194.1 149 64.4
MD14G1148400 Malus domestica HOM05D005570 ORTHO05D007368 9.4e-48 194.1 165 58.8
AT2G04340 Arabidopsis thaliana HOM05D005570 ORTHO05D007368 1.2e-47 193.7 150 64.0
arahy.Tifrunner.gnm1.ann1.66C0B7 Arachis hypogaea HOM05D005570 ORTHO05D007368 1.2e-47 193.7 150 62.7
arahy.Tifrunner.gnm1.ann1.TWVE3E Arachis hypogaea HOM05D005570 ORTHO05D007368 1.2e-47 193.7 150 62.7
Prupe.5G143000 Prunus persica HOM05D005570 ORTHO05D007368 1.2e-47 193.7 150 63.3
Carub.0003s2602 Capsella rubella HOM05D005570 ORTHO05D007368 1.6e-47 193.4 150 63.3
Thhalv10002687m.g Eutrema salsugineum HOM05D005570 ORTHO05D007368 1.6e-47 193.4 151 62.9
Aa31LG7G6130 Aethionema arabicum HOM05D005570 ORTHO05D007368 2.1e-47 193.0 147 66.7
CARHR102200 Cardamine hirsuta HOM05D005570 ORTHO05D007368 2.1e-47 193.0 150 63.3
ECA240G0244 Erigeron canadensis HOM05D005570 ORTHO05D007368 2.1e-47 193.0 132 68.9
Sabra14G0129400 Salix brachista HOM05D005570 ORTHO05D007368 2.7e-47 192.6 176 56.2
Potri.014G169500 Populus trichocarpa HOM05D005570 ORTHO05D007368 4.7e-47 191.8 177 55.9
DCAR_008745 Daucus carota HOM05D005570 ORTHO05D007368 6.1e-47 191.4 152 61.8
ATR0751G216 Amborella trichopoda HOM05D005570 ORTHO05D007368 8.0e-47 191.0 152 64.5
AUR62000128 Chenopodium quinoa HOM05D005570 ORTHO05D007368 8.0e-47 191.0 162 59.3
PSO421G0324 Papaver somniferum HOM05D005570 ORTHO05D007368 8.0e-47 191.0 172 55.8
FvH4_5g09330 Fragaria vesca HOM05D005570 ORTHO05D007368 1.0e-46 190.7 153 62.7
FAN13G2066 Fragaria x ananassa HOM05D005570 ORTHO05D007368 1.0e-46 190.7 153 62.7
FAN18G0853 Fragaria x ananassa HOM05D005570 ORTHO05D007368 1.0e-46 190.7 153 62.7
PSO357G0372 Papaver somniferum HOM05D005570 ORTHO05D007368 1.0e-46 190.7 169 56.8
Aqoxy2G01347 Aquilegia oxysepala HOM05D005570 ORTHO05D007368 2.3e-46 189.5 166 58.4
PSO063G6961 Papaver somniferum HOM05D005570 ORTHO05D007368 2.3e-46 189.5 172 57.0
Migut.H01280 Erythranthe guttata HOM05D005570 ORTHO05D007368 3.0e-46 189.1 165 55.8
Ca_18776_v3 Cicer arietinum L. HOM05D005570 ORTHO05D007368 4.0e-46 188.7 149 61.1
FAN04G1041 Fragaria x ananassa HOM05D005570 ORTHO05D007368 4.0e-46 188.7 152 62.5
arahy.Tifrunner.gnm1.ann1.18Q938 Arachis hypogaea HOM05D005570 ORTHO05D007368 6.8e-46 188.0 149 61.7
RcHm_v2.0_Chr7g0188821 Rosa chinensis HOM05D005570 ORTHO05D007368 6.8e-46 188.0 150 62.7
Lj1g0005707 Lotus japonicus HOM05D005570 ORTHO05D007368 1.2e-45 187.2 150 62.0
QL10p000758 Quercus lobata HOM05D005570 ORTHO05D007368 2.0e-45 186.4 150 61.3
Psat7g132520 Pisum sativum HOM05D005570 ORTHO05D007368 4.4e-45 185.3 151 58.9
Aqoxy7G00316 Aquilegia oxysepala HOM05D005570 ORTHO05D007368 7.5e-45 184.5 150 61.3
MELO3C026167.2 Cucumis melo HOM05D005570 ORTHO05D007368 1.3e-44 183.7 211 46.9
arahy.Tifrunner.gnm1.ann1.CPK3HX Arachis hypogaea HOM05D005570 ORTHO05D007368 2.2e-44 183.0 149 61.7
VMungo0251G2804 Vigna mungo HOM05D005570 ORTHO05D007368 4.9e-44 181.8 149 60.4
Glyma.07G223300 Glycine max HOM05D005570 ORTHO05D007368 1.1e-43 180.6 150 58.7
Lalb_Chr09g0328771 Lupinus albus HOM05D005570 ORTHO05D007368 3.1e-43 179.1 149 57.7
Medtr4g083580 Medicago truncatula HOM05D005570 ORTHO05D007368 4.1e-43 178.7 148 58.1
TPR.G11531 Trifolium pratense HOM05D005570 ORTHO05D007368 4.1e-43 178.7 150 58.0
CSS0039609 Camellia sinensis var. sinensis HOM05D005570 ORTHO05D007368 7.0e-43 177.9 171 52.0
Phvul.002G100000 Phaseolus vulgaris HOM05D005570 ORTHO05D007368 2.7e-42 176.0 149 57.7
CANSAT01G1761 Cannabis sativa HOM05D005570 ORTHO05D007368 7.7e-42 174.5 152 58.6
MBI14_g13534_MAGBIO Magnolia biondii HOM05D005570 ORTHO05D007368 3.8e-41 172.2 106 78.3
PSO421G0119 Papaver somniferum HOM05D005570 ORTHO05D007368 1.1e-40 170.6 127 66.9
TPR.G34081 Trifolium pratense HOM05D005570 ORTHO05D007368 1.9e-40 169.9 140 60.0
CDE10G0507 Ceratophyllum demersum HOM05D005570 ORTHO05D007368 2.5e-40 169.5 139 58.3
Oeu015172.1 Olea europaea HOM05D005570 ORTHO05D007368 3.3e-40 169.1 141 59.6
Lj8A137G54 Lonicera japonica HOM05D005570 ORTHO05D007368 7.2e-40 167.9 143 58.7
EL10Ac4g10242 Beta vulgaris HOM05D005570 ORTHO05D007368 9.5e-40 167.5 200 46.5
Cpa.g.sc136.41 Carica papaya HOM05D005570 ORTHO05D007368 9.5e-40 167.5 130 66.2
SGA_v2.0_scaffold317G48443 Striga asiatica HOM05D005570 ORTHO05D007368 3.6e-39 165.6 169 53.8
vmacro09474 Vaccinium macrocarpon HOM05D005570 ORTHO05D007368 4.7e-39 165.2 164 54.9
SEGI_08222 Sequoiadendron giganteum HOM05D005570 ORTHO05D007368 8.9e-38 161.0 130 60.8
SGA_v2.0_scaffold96G29016 Striga asiatica HOM05D005570 ORTHO05D007368 2.2e-36 156.4 125 64.0
TWI36G1338 Tripterygium wilfordii HOM05D005570 ORTHO05D007368 3.7e-36 155.6 143 54.5
Ah.12g059860 Amaranthus hybridus HOM05D005570 ORTHO05D007368 4.9e-36 155.2 134 60.4
SGA_v2.0_scaffold317G48460 Striga asiatica HOM05D005570 ORTHO05D007368 3.3e-32 142.5 126 59.5
Rhsim04G0030300 Rhododendron simsii HOM05D005570 ORTHO05D007368 1.6e-31 140.2 140 54.3
Lsat_1_v5_gn_4_24381 Lactuca sativa HOM05D005570 ORTHO05D007368 1.0e-30 137.5 101 66.3
SGA_v2.0_scaffold28G12060 Striga asiatica HOM05D005570 ORTHO05D007368 2.6e-29 132.9 108 61.1
Rhsim04G0030400 Rhododendron simsii HOM05D005570 ORTHO05D007368 2.2e-28 129.8 79 77.2
Mapoly0084s0063 Marchantia polymorpha HOM05D005570 ORTHO05D007368 2.4e-27 126.3 121 52.1
Hund21535 Selenicereus undatus HOM05D005570 ORTHO05D007368 2.7e-26 122.9 106 57.5
SGA_v2.0_scaffold323G48653 Striga asiatica HOM05D005570 ORTHO05D007368 8.6e-25 117.9 116 56.0
SGA_v2.0_scaffold2G00813 Striga asiatica HOM05D005570 ORTHO05D007368 1.9e-24 116.7 175 44.6
Pp3c22_13450 Physcomitrium patens HOM05D005570 ORTHO05D007368 7.3e-24 114.8 164 37.2
Solyc07g045260.3 Solanum lycopersicum HOM05D005570 ORTHO05D007368 1.2e-21 107.5 66 74.2
Gohir.D01G037901 Gossypium hirsutum HOM05D005570 ORTHO05D007368 6.4e-20 101.7 78 60.3
Oeu031101.2 Olea europaea HOM05D005570 ORTHO05D007368 1.7e-17 93.6 54 77.8
SGA_v2.0_scaffold317G48459 Striga asiatica HOM05D005570 ORTHO05D007368 2.5e-16 89.7 59 72.9
Glyma.20G022600 Glycine max HOM05D005570 ORTHO05D007368 5.6e-16 88.6 101 45.5
Lsat_1_v5_gn_4_72161 Lactuca sativa HOM05D005570 ORTHO05D007368 8.1e-15 84.7 53 73.6
Potri.014G169750 Populus trichocarpa HOM05D005570 ORTHO05D007368 1.2e-13 80.9 52 75.0
Potri.001G241100 Populus trichocarpa HOM05D005570 ORTHO05D007368 4.4e-13 79.0 74 54.1
CBR_g57071 Chara braunii HOM05D001740 ORTHO05D001468 2.9e-12 76.3 85 38.8
Potri.001G240904 Populus trichocarpa HOM05D005570 ORTHO05D007368 1.1e-11 74.3 54 64.8
Hund30621 Selenicereus undatus HOM05D005570 ORTHO05D007368 1.2e-10 70.9 72 55.6
Hund30622 Selenicereus undatus HOM05D005570 ORTHO05D007368 1.2e-10 70.9 72 55.6


User provided reference genes

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