Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_013625 Vanilla planifolia HOM05D004411 ORTHO05D005569 7.8e-200 700.3 359 100.0
TAR627G0926 Trochodendron aralioides HOM05D004411 ORTHO05D005569 2.6e-62 243.4 395 43.0
CSS0013783 Camellia sinensis var. sinensis HOM05D004411 ORTHO05D005569 7.6e-62 241.9 384 43.2
PSO210G7535 Papaver somniferum HOM05D004411 ORTHO05D005569 6.4e-61 238.8 393 41.7
PSO210G6597 Papaver somniferum HOM05D004411 ORTHO05D005569 3.5e-59 233.0 391 42.5
Dinv22283 Davidia involucrata HOM05D004411 ORTHO05D005569 4.6e-59 232.6 385 43.1
CDE07G0547 Ceratophyllum demersum HOM05D004411 ORTHO05D005569 3.0e-58 229.9 349 44.4
Hma1.2p1_0938F.1_g239200 Hydrangea macrophylla HOM05D004411 ORTHO05D005569 7.3e-57 225.3 387 40.8
GSVIVG01008286001 Vitis vinifera HOM05D004411 ORTHO05D005569 7.3e-57 225.3 391 41.9
Dinv40733 Davidia involucrata HOM05D004411 ORTHO05D005569 1.3e-56 224.6 358 44.7
PGR083G2632 Punica granatum HOM05D004411 ORTHO05D005569 2.1e-56 223.8 385 40.0
Eucgr.E01365 Eucalyptus grandis HOM05D004411 ORTHO05D005569 2.8e-56 223.4 397 39.3
Ciclev10008629m.g Citrus clementina HOM05D004411 ORTHO05D005569 3.6e-56 223.0 391 41.2
Peaxi162Scf00450g00868 Petunia axillaris HOM05D004411 ORTHO05D005569 4.8e-56 222.6 394 39.1
QL08p011929 Quercus lobata HOM05D004411 ORTHO05D005569 6.2e-56 222.2 408 40.2
CAN.G337.104 Capsicum annuum HOM05D004411 ORTHO05D005569 2.4e-55 220.3 385 40.8
QL08p012116 Quercus lobata HOM05D004411 ORTHO05D005569 2.4e-55 220.3 413 39.5
Atru.chr2.3274 Acer truncatum HOM05D004411 ORTHO05D005569 4.0e-55 219.5 262 48.1
TAR624G0740 Trochodendron aralioides HOM05D004411 ORTHO05D005569 1.2e-54 218.0 347 44.7
CANSAT56G2724 Cannabis sativa HOM05D004411 ORTHO05D005569 4.5e-54 216.1 243 53.1
Cc02_g24710 Coffea canephora HOM05D004411 ORTHO05D005569 4.5e-54 216.1 388 38.9
Rhsim04G0001700 Rhododendron simsii HOM05D004411 ORTHO05D005569 5.8e-54 215.7 390 43.1
Actinidia35328 Actinidia chinensis HOM05D004411 ORTHO05D005569 9.9e-54 214.9 390 40.8
Duzib213G0043 Durio zibethinus HOM05D004411 ORTHO05D005569 2.9e-53 213.4 389 40.4
Aqoxy3G00168 Aquilegia oxysepala HOM05D004411 ORTHO05D005569 4.9e-53 212.6 387 40.3
SalBow7G1998 Salvia bowleyana HOM05D004411 ORTHO05D005569 4.9e-53 212.6 383 39.9
RcHm_v2.0_Chr5g0037971 Rosa chinensis HOM05D004411 ORTHO05D005569 6.4e-53 212.2 388 40.5
Solyc07g064300.3 Solanum lycopersicum HOM05D004411 ORTHO05D005569 6.4e-53 212.2 386 38.6
Atru.chr7.1306 Acer truncatum HOM05D004411 ORTHO05D005569 1.1e-52 211.5 261 47.5
Zm00001eb317630 Zea mays HOM05D004411 ORTHO05D005569 1.1e-52 211.5 338 39.9
Rhsim04G0000600 Rhododendron simsii HOM05D004411 ORTHO05D005569 1.9e-52 210.7 403 42.2
Potri.011G136400 Populus trichocarpa HOM05D004411 ORTHO05D005569 2.4e-52 210.3 404 40.3
CiPaw.05G090700 Carya illinoinensis HOM05D004411 ORTHO05D005569 3.2e-52 209.9 387 39.3
MSTRG.12964 Avicennia marina HOM05D004411 ORTHO05D005569 9.3e-52 208.4 306 45.1
Gorai.002G085400 Gossypium raimondii HOM05D004411 ORTHO05D005569 1.6e-51 207.6 394 39.3
Lalb_Chr18g0049751 Lupinus albus HOM05D004411 ORTHO05D005569 1.6e-51 207.6 348 40.8
Medtr3g019330 Medicago truncatula HOM05D004411 ORTHO05D005569 2.1e-51 207.2 213 52.6
Prupe.4G208500 Prunus persica HOM05D004411 ORTHO05D005569 2.1e-51 207.2 386 41.2
Gohir.D01G064500 Gossypium hirsutum HOM05D004411 ORTHO05D005569 3.5e-51 206.5 385 39.0
Oeu021397.1 Olea europaea HOM05D004411 ORTHO05D005569 3.5e-51 206.5 355 41.4
Os09g0504900 Oryza sativa ssp. japonica HOM05D004411 ORTHO05D005569 4.6e-51 206.1 338 40.5
ClCG10G005570 Citrullus lanatus HOM05D004411 ORTHO05D005569 6.0e-51 205.7 385 38.2
Nn1g07099 Nelumbo nucifera HOM05D004411 ORTHO05D005569 6.0e-51 205.7 183 63.9
Sc06g0005160 Simmondsia chinensis HOM05D004411 ORTHO05D005569 6.0e-51 205.7 328 42.4
Hund07317 Selenicereus undatus HOM05D004411 ORTHO05D005569 1.0e-50 204.9 410 38.5
Thecc.07G044400 Theobroma cacao HOM05D004411 ORTHO05D005569 1.0e-50 204.9 324 43.2
TWI38G2195 Tripterygium wilfordii HOM05D004411 ORTHO05D005569 1.0e-50 204.9 240 49.6
Glyma.08G313000 Glycine max HOM05D004411 ORTHO05D005569 1.3e-50 204.5 333 39.0
Lj6g0013350 Lotus japonicus HOM05D004411 ORTHO05D005569 1.3e-50 204.5 369 39.3
Nitab4.5_0009551g0010 Nicotiana tabacum HOM05D004411 ORTHO05D005569 2.3e-50 203.8 271 45.8
unitig_0.g2388 Utricularia gibba HOM05D004411 ORTHO05D005569 3.0e-50 203.4 244 49.6
TWI38G0098 Tripterygium wilfordii HOM05D004411 ORTHO05D005569 3.9e-50 203.0 400 38.0
CiPaw.11G186800 Carya illinoinensis HOM05D004411 ORTHO05D005569 5.1e-50 202.6 218 55.5
RcHm_v2.0_Chr1g0330851 Rosa chinensis HOM05D004411 ORTHO05D005569 6.7e-50 202.2 214 55.1
FvH4_3g22120 Fragaria vesca HOM05D004411 ORTHO05D005569 8.7e-50 201.8 213 55.9
Ca_05663_v3 Cicer arietinum L. HOM05D004411 ORTHO05D005569 1.9e-49 200.7 409 35.9
Ca_24447_v3 Cicer arietinum L. HOM05D004411 ORTHO05D005569 2.5e-49 200.3 211 52.1
Migut.H01843 Erythranthe guttata HOM05D004411 ORTHO05D005569 2.5e-49 200.3 397 37.5
Gohir.A01G077000 Gossypium hirsutum HOM05D004411 ORTHO05D005569 2.5e-49 200.3 393 39.2
Psat5g216880 Pisum sativum HOM05D004411 ORTHO05D005569 3.3e-49 199.9 387 37.7
vmacro09736 Vaccinium macrocarpon HOM05D004411 ORTHO05D005569 7.4e-49 198.7 397 38.0
ATR0564G530 Amborella trichopoda HOM05D004411 ORTHO05D005569 9.6e-49 198.4 333 41.7
DCAR_008678 Daucus carota HOM05D004411 ORTHO05D005569 2.1e-48 197.2 336 41.4
TPR.G3855 Trifolium pratense HOM05D004411 ORTHO05D005569 2.8e-48 196.8 285 44.6
Phvul.006G038300 Phaseolus vulgaris HOM05D004411 ORTHO05D005569 3.7e-48 196.4 290 42.4
THA.LOC104798777 Tarenaya hassleriana HOM05D004411 ORTHO05D005569 1.4e-47 194.5 366 39.1
Sed0027425 Sechium edule HOM05D004411 ORTHO05D005569 5.3e-47 192.6 253 45.5
MELO3C003591.2 Cucumis melo HOM05D004411 ORTHO05D005569 6.9e-47 192.2 386 36.8
Glyma.08G318600 Glycine max HOM05D004411 ORTHO05D005569 1.2e-46 191.4 290 41.0
Aqoxy7G03937 Aquilegia oxysepala HOM05D004411 ORTHO05D005569 1.5e-46 191.0 381 37.0
CsaV3_3G017510 Cucumis sativus L. HOM05D004411 ORTHO05D005569 1.5e-46 191.0 397 36.8
Sabra11G0122500 Salix brachista HOM05D004411 ORTHO05D005569 1.5e-46 191.0 229 50.7
ECA236G1785 Erigeron canadensis HOM05D004411 ORTHO05D005569 4.5e-46 189.5 353 38.0
HanXRQChr11g0336281 Helianthus annuus HOM05D004411 ORTHO05D005569 7.6e-46 188.7 339 39.2
AT1G50910 Arabidopsis thaliana HOM05D004411 ORTHO05D005569 1.0e-45 188.3 280 43.2
Zm00001eb253190 Zea mays HOM05D004411 ORTHO05D005569 1.0e-45 188.3 233 44.6
Lsat_1_v5_gn_7_109101 Lactuca sativa HOM05D004411 ORTHO05D005569 1.3e-45 188.0 325 40.9
Lj2g0018498 Lotus japonicus HOM05D004411 ORTHO05D005569 1.3e-45 188.0 360 37.2
FAN25G3657 Fragaria x ananassa HOM05D006818 ORTHO05D008674 2.2e-45 187.2 217 52.5
EL10Ac9g22002 Beta vulgaris HOM05D004411 ORTHO05D005569 3.8e-45 186.4 250 47.2
Thhalv10011488m.g Eutrema salsugineum HOM05D004411 ORTHO05D005569 1.1e-44 184.9 286 44.1
Aa31LG10G3320 Aethionema arabicum HOM05D004411 ORTHO05D005569 1.9e-44 184.1 371 37.5
MD11G1222400 Malus domestica HOM05D004411 ORTHO05D005569 3.2e-44 183.3 351 39.6
SGA_v2.0_scaffold9G05058 Striga asiatica HOM05D004411 ORTHO05D005569 5.5e-44 182.6 269 44.2
AL1G58640 Arabidopsis lyrata HOM05D004411 ORTHO05D005569 7.1e-44 182.2 241 46.5
AUR62000402 Chenopodium quinoa HOM05D004411 ORTHO05D005569 1.2e-43 181.4 346 37.6
Medtr4g088440 Medicago truncatula HOM05D004411 ORTHO05D005569 2.1e-43 180.6 231 46.8
Lalb_Chr15g0080391 Lupinus albus HOM05D004411 ORTHO05D005569 4.6e-43 179.5 183 52.5
Oeu005458.1 Olea europaea HOM05D004411 ORTHO05D005569 6.0e-43 179.1 418 36.4
CARHR040960 Cardamine hirsuta HOM05D004411 ORTHO05D005569 1.0e-42 178.3 215 48.8
Sp1g37650 Schrenkiella parvula HOM05D004411 ORTHO05D005569 2.3e-42 177.2 246 45.9
Carub.0001s3986 Capsella rubella HOM05D004411 ORTHO05D005569 3.0e-42 176.8 244 45.9
arahy.Tifrunner.gnm1.ann1.01DGNM Arachis hypogaea HOM05D004411 ORTHO05D005569 5.1e-42 176.0 324 38.0
BcaB07g33532 Brassica carinata HOM05D004411 ORTHO05D005569 1.5e-41 174.5 234 47.0
arahy.Tifrunner.gnm1.ann1.7KL5HB Arachis hypogaea HOM05D004411 ORTHO05D005569 1.6e-40 171.0 343 37.3
BraA06t23489Z Brassica rapa HOM05D004411 ORTHO05D005569 1.1e-39 168.3 234 45.7
A06p02820 Brassica napus HOM05D004411 ORTHO05D005569 1.4e-39 167.9 234 45.3
PSO210G0554 Papaver somniferum HOM05D004411 ORTHO05D005569 1.8e-39 167.5 276 41.7
BcaC08g43264 Brassica carinata HOM05D004411 ORTHO05D005569 6.9e-39 165.6 208 47.6
C06p06080 Brassica napus HOM05D004411 ORTHO05D005569 6.9e-39 165.6 208 47.6
BolC6t35721H Brassica oleracea HOM05D004411 ORTHO05D005569 6.9e-39 165.6 208 47.6
AL2G19790 Arabidopsis lyrata HOM05D004411 ORTHO05D005569 1.3e-37 161.4 182 51.6
AL8G37460 Arabidopsis lyrata HOM05D004411 ORTHO05D005569 1.3e-37 161.4 182 51.6
SEGI_26616 Sequoiadendron giganteum HOM05D004411 ORTHO05D005569 2.9e-37 160.2 410 31.7
SHI31835 Sapria himalayana HOM05D004411 ORTHO05D005569 1.1e-36 158.3 257 42.4
BcaB06g26197 Brassica carinata HOM05D004411 ORTHO05D005569 2.1e-35 154.1 280 40.0
BolC5t32046H Brassica oleracea HOM05D004411 ORTHO05D005569 1.9e-33 147.5 222 42.8
FAN21G4008 Fragaria x ananassa HOM05D004411 ORTHO05D005569 9.7e-33 145.2 213 44.6
PGSC0003DMG402013923 Solanum tuberosum HOM05D004411 ORTHO05D005569 1.3e-32 144.8 385 32.2
Nitab4.5_0000622g0210 Nicotiana tabacum HOM05D004411 ORTHO05D005569 9.0e-31 138.7 229 40.6
BcaB02g11193 Brassica carinata HOM05D004411 ORTHO05D005569 1.2e-30 138.3 245 40.4
AUR62006758 Chenopodium quinoa HOM05D004411 ORTHO05D005569 2.6e-30 137.1 314 33.8
Cpa.g.sc12.166 Carica papaya HOM05D004411 ORTHO05D005569 4.5e-30 136.3 390 32.1
Manes.03G127300 Manihot esculenta HOM05D004411 ORTHO05D005569 1.7e-29 134.4 235 39.1
C05p33200 Brassica napus HOM05D004411 ORTHO05D005569 2.1e-27 127.5 198 42.9
FAN16G0093 Fragaria x ananassa HOM05D006818 ORTHO05D008674 1.4e-26 124.8 252 38.1
Nitab4.5_0000397g0320 Nicotiana tabacum HOM05D004411 ORTHO05D005569 2.3e-26 124.0 283 33.9
Sopen07g032450 Solanum pennellii HOM05D004411 ORTHO05D005569 2.3e-26 124.0 274 36.1
Ah.06g195930 Amaranthus hybridus HOM05D004411 ORTHO05D005569 3.3e-25 120.2 206 41.7
Haze_09645 Corylus avellana HOM05D006818 ORTHO05D008674 8.2e-24 115.5 343 31.8
PSO339G6638 Papaver somniferum HOM05D004411 ORTHO05D005569 4.1e-23 113.2 157 48.4
COL.COLO4_09627 Corchorus olitorius HOM05D004411 ORTHO05D005569 4.5e-22 109.8 281 34.5
Pp3c25_11530 Physcomitrium patens HOM05D004411 ORTHO05D005569 2.9e-21 107.1 393 28.2
VMungo1383G2244 Vigna mungo HOM05D004411 ORTHO05D005569 6.5e-21 105.9 120 46.7
DCAR_011015 Daucus carota HOM05D004411 ORTHO05D005569 9.4e-20 102.1 186 36.6
FAN11G0521 Fragaria x ananassa HOM05D006818 ORTHO05D008674 6.1e-19 99.4 212 35.8
ECA236G1239 Erigeron canadensis HOM05D004411 ORTHO05D005569 8.8e-18 95.5 237 36.3
A05p19860 Brassica napus HOM05D004411 ORTHO05D005569 1.7e-16 91.3 120 45.0
BraA05t20891Z Brassica rapa HOM05D004411 ORTHO05D005569 1.7e-16 91.3 120 45.0
Cc09_g02490 Coffea canephora HOM05D004411 ORTHO05D005569 3.7e-16 90.1 106 49.1
Mapoly0160s0028 Marchantia polymorpha HOM05D004411 ORTHO05D005569 3.7e-16 90.1 207 30.4
Glyma.09G101400 Glycine max HOM05D004411 ORTHO05D005569 6.3e-16 89.4 200 33.5
VMungo0540G0671 Vigna mungo HOM05D004411 ORTHO05D005569 1.8e-15 87.8 154 39.0
MD03G1208200 Malus domestica HOM05D004411 ORTHO05D005569 4.1e-15 86.7 342 28.4
VMungo1383G3213 Vigna mungo HOM05D004411 ORTHO05D005569 4.1e-15 86.7 111 45.9
Hma1.2p1_3713F.1_g337350 Hydrangea macrophylla HOM05D004411 ORTHO05D005569 5.3e-15 86.3 77 55.8
SMO367G0149 Selaginella moellendorffii HOM05D004411 ORTHO05D005569 2.0e-14 84.3 189 31.7
Cc00_g16970 Coffea canephora HOM05D004411 ORTHO05D005569 2.6e-14 84.0 109 47.7
PGSC0003DMG401013923 Solanum tuberosum HOM05D004411 ORTHO05D005569 2.6e-14 84.0 200 31.5
Oeu034511.1 Olea europaea HOM05D004411 ORTHO05D005569 1.3e-13 81.6 77 55.8
Glyma.09G101500 Glycine max HOM05D004411 ORTHO05D005569 1.9e-12 77.8 83 47.0
AagrBONN_evm.TU.Sc2ySwM_344.3992 Anthoceros agrestis HOM05D004411 ORTHO05D005569 3.7e-08 63.5 109 38.5
Cc02_g22100 Coffea canephora HOM05D004411 ORTHO05D005569 3.7e-08 63.5 114 41.2
BcaC05g27378 Brassica carinata HOM05D003430 ORTHO05D004809 6.3e-08 62.8 86 40.7
PGSC0003DMG400013925 Solanum tuberosum HOM05D004411 ORTHO05D005569 9.1e-07 58.9 49 57.1
MCO11G525 Micromonas commoda HOM05D004411 ORTHO05D005569 2.0e-06 57.8 193 25.9
CBR_g6715 Chara braunii HOM05D004411 ORTHO05D005569 7.7e-06 55.8 144 30.6


User provided reference genes

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