Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_013556 Vanilla planifolia HOM05D001705 ORTHO05D008928 1.1e-60 236.5 123 100.0
TAR628G0577 Trochodendron aralioides HOM05D001705 ORTHO05D008928 8.2e-24 114.0 85 64.7
CDE11G0405 Ceratophyllum demersum HOM05D001705 ORTHO05D008928 1.1e-23 113.6 102 54.9
Zm00001eb244080 Zea mays HOM05D001705 ORTHO05D008928 1.1e-23 113.6 80 66.2
FAN24G2035 Fragaria x ananassa HOM05D001705 ORTHO05D008928 1.4e-23 113.2 108 52.8
MBI06_g14319_MAGBIO Magnolia biondii HOM05D001705 ORTHO05D008928 1.4e-23 113.2 94 58.5
RcHm_v2.0_Chr6g0251131 Rosa chinensis HOM05D001705 ORTHO05D008928 1.8e-23 112.8 101 56.4
TAR376G0455 Trochodendron aralioides HOM05D001705 ORTHO05D008928 1.8e-23 112.8 109 56.9
MD10G1004200 Malus domestica HOM05D001705 ORTHO05D008928 2.4e-23 112.5 101 55.4
FvH4_2g00750 Fragaria vesca HOM05D001705 ORTHO05D008928 3.1e-23 112.1 89 60.7
FAN27G0168 Fragaria x ananassa HOM05D001705 ORTHO05D008928 3.1e-23 112.1 89 60.7
SalBow7G0612 Salvia bowleyana HOM05D001705 ORTHO05D008928 4.1e-23 111.7 89 61.8
Aqoxy1G00582 Aquilegia oxysepala HOM05D001705 ORTHO05D008928 5.3e-23 111.3 102 54.9
Prupe.8G006600 Prunus persica HOM05D001705 ORTHO05D008928 6.9e-23 110.9 101 55.4
Zm00001eb182270 Zea mays HOM05D001705 ORTHO05D008928 1.2e-22 110.2 80 63.8
AUR62028345 Chenopodium quinoa HOM05D001705 ORTHO05D008928 2.6e-22 109.0 94 59.6
Actinidia29374 Actinidia chinensis HOM05D001705 ORTHO05D008928 4.5e-22 108.2 103 53.4
Eucgr.F02944 Eucalyptus grandis HOM05D001705 ORTHO05D008928 4.5e-22 108.2 84 61.9
Cfa008073 Carpinus fangiana HOM05D001705 ORTHO05D008928 5.9e-22 107.8 84 63.1
MD05G1003200 Malus domestica HOM05D001705 ORTHO05D008928 5.9e-22 107.8 101 54.5
CANSAT21G1408 Cannabis sativa HOM05D001705 ORTHO05D008928 7.6e-22 107.5 100 52.0
CANSAT21G2117 Cannabis sativa HOM05D001705 ORTHO05D008928 7.6e-22 107.5 100 52.0
Dinv22114 Davidia involucrata HOM05D001705 ORTHO05D008928 7.6e-22 107.5 90 58.9
Hma1.2p1_0238F.1_g099670 Hydrangea macrophylla HOM05D001705 ORTHO05D008928 7.6e-22 107.5 89 59.6
Nn6g34378 Nelumbo nucifera HOM05D001705 ORTHO05D008928 7.6e-22 107.5 85 61.2
CSS0025148 Camellia sinensis var. sinensis HOM05D006697 ORTHO05D008161 1.0e-21 107.1 112 51.8
MSTRG.5080 Avicennia marina HOM05D001705 ORTHO05D008928 1.3e-21 106.7 80 63.8
Duzib106G1039 Durio zibethinus HOM05D001705 ORTHO05D008928 1.3e-21 106.7 84 60.7
EL10Ac8g18938 Beta vulgaris HOM05D001705 ORTHO05D008928 1.7e-21 106.3 92 58.7
Os02g0558300 Oryza sativa ssp. japonica HOM05D001705 ORTHO05D008928 1.7e-21 106.3 77 66.2
unitig_8.g4896 Utricularia gibba HOM05D001705 ORTHO05D008928 1.7e-21 106.3 92 57.6
VMungo1080G1609 Vigna mungo HOM05D001705 ORTHO05D008928 1.7e-21 106.3 84 61.9
Ah.13g075530 Amaranthus hybridus HOM05D001705 ORTHO05D008928 2.2e-21 105.9 84 63.1
CiPaw.03G013900 Carya illinoinensis HOM05D001705 ORTHO05D008928 2.2e-21 105.9 90 58.9
Lalb_Chr15g0079721 Lupinus albus HOM05D001705 ORTHO05D008928 2.2e-21 105.9 84 60.7
Phvul.L001622 Phaseolus vulgaris HOM05D001705 ORTHO05D008928 2.2e-21 105.9 84 60.7
Potri.019G070801 Populus trichocarpa HOM05D001705 ORTHO05D008928 2.2e-21 105.9 84 61.9
CiPaw.10G112700 Carya illinoinensis HOM05D001705 ORTHO05D008928 2.9e-21 105.5 105 54.3
Dinv37409 Davidia involucrata HOM05D001705 ORTHO05D008928 2.9e-21 105.5 104 51.0
Hma1.2p1_2213F.1_g317220 Hydrangea macrophylla HOM05D001705 ORTHO05D008928 2.9e-21 105.5 88 58.0
arahy.Tifrunner.gnm1.ann1.X4BGNP Arachis hypogaea HOM05D001705 ORTHO05D008928 3.8e-21 105.1 90 57.8
CSS0011722 Camellia sinensis var. sinensis HOM05D006697 ORTHO05D008161 3.8e-21 105.1 101 55.4
Haze_13961 Corylus avellana HOM05D001705 ORTHO05D008953 3.8e-21 105.1 83 60.2
Medtr3g008540 Medicago truncatula HOM05D001705 ORTHO05D008928 3.8e-21 105.1 84 59.5
QL07p031108 Quercus lobata HOM05D001705 ORTHO05D008928 3.8e-21 105.1 83 61.4
AUR62025342 Chenopodium quinoa HOM05D001705 ORTHO05D008928 5.0e-21 104.8 94 57.4
DCAR_003512 Daucus carota HOM05D001705 ORTHO05D008928 5.0e-21 104.8 111 48.6
QL07p047839 Quercus lobata HOM05D001705 ORTHO05D008928 5.0e-21 104.8 103 53.4
Glyma.06G321300 Glycine max HOM05D001705 ORTHO05D008928 6.5e-21 104.4 89 58.4
Lj3g0021440 Lotus japonicus HOM05D001705 ORTHO05D008928 6.5e-21 104.4 92 55.4
Sabra19G0082700 Salix brachista HOM05D001705 ORTHO05D008928 6.5e-21 104.4 84 60.7
Gohir.A06G168000 Gossypium hirsutum HOM05D001705 ORTHO05D008928 1.1e-20 103.6 85 56.5
Lj3g0024983 Lotus japonicus HOM05D001705 ORTHO05D008928 1.1e-20 103.6 92 56.5
PGR044G0661 Punica granatum HOM05D001705 ORTHO05D008928 1.1e-20 103.6 84 60.7
Peaxi162Scf00078g00076 Petunia axillaris HOM05D001705 ORTHO05D008928 1.4e-20 103.2 82 58.5
Psat5g227400 Pisum sativum HOM05D001705 ORTHO05D008928 1.4e-20 103.2 84 58.3
Gohir.D06G175400 Gossypium hirsutum HOM05D001705 ORTHO05D008928 1.9e-20 102.8 84 57.1
Gorai.010G205800 Gossypium raimondii HOM05D001705 ORTHO05D008928 1.9e-20 102.8 84 57.1
Sc18g0002990 Simmondsia chinensis HOM05D001705 ORTHO05D008928 3.2e-20 102.1 90 58.9
Migut.C01384 Erythranthe guttata HOM05D001705 ORTHO05D008928 4.2e-20 101.7 82 59.8
Atru.chr3.1320 Acer truncatum HOM05D001705 ORTHO05D008928 5.5e-20 101.3 84 59.5
CsaV3_5G039950 Cucumis sativus L. HOM05D001705 ORTHO05D008928 5.5e-20 101.3 109 46.8
MELO3C022174.2 Cucumis melo HOM05D001705 ORTHO05D008928 7.2e-20 100.9 85 55.3
Nitab4.5_0007940g0020 Nicotiana tabacum HOM05D001705 ORTHO05D008928 7.2e-20 100.9 82 57.3
TWI81G0898 Tripterygium wilfordii HOM05D001705 ORTHO05D008928 7.2e-20 100.9 84 59.5
Ciclev10022992m.g Citrus clementina HOM05D001705 ORTHO05D008928 9.3e-20 100.5 85 58.8
Rhsim12G0002800 Rhododendron simsii HOM05D001705 ORTHO05D008928 9.3e-20 100.5 103 51.5
PGSC0003DMG400010036 Solanum tuberosum HOM05D001705 ORTHO05D008928 9.3e-20 100.5 82 56.1
BcaB05g23921 Brassica carinata HOM05D001705 ORTHO05D008928 1.2e-19 100.1 96 53.1
Sopen02g034700 Solanum pennellii HOM05D001705 ORTHO05D008928 1.2e-19 100.1 82 54.9
vmacro00942 Vaccinium macrocarpon HOM05D001705 ORTHO05D008928 1.2e-19 100.1 103 50.5
GSVIVG01036284001 Vitis vinifera HOM05D001705 ORTHO05D008928 1.2e-19 100.1 85 58.8
BcaB01g01450 Brassica carinata HOM05D001705 ORTHO05D008928 1.6e-19 99.8 107 47.7
CAN.G836.15 Capsicum annuum HOM05D001705 ORTHO05D008928 1.6e-19 99.8 82 54.9
ClCG08G000770 Citrullus lanatus HOM05D001705 ORTHO05D008928 1.6e-19 99.8 85 54.1
HanXRQChr01g0026311 Helianthus annuus HOM05D001705 ORTHO05D008928 1.6e-19 99.8 80 58.8
Sed0017068 Sechium edule HOM05D001705 ORTHO05D008928 1.6e-19 99.8 85 54.1
Manes.03G079500 Manihot esculenta HOM05D001705 ORTHO05D008928 2.1e-19 99.4 84 54.8
Nitab4.5_0003432g0050 Nicotiana tabacum HOM05D001705 ORTHO05D008928 2.1e-19 99.4 82 56.1
ATR0757G218 Amborella trichopoda HOM05D001705 ORTHO05D008928 3.6e-19 98.6 106 50.0
PSO339G0564 Papaver somniferum HOM05D001705 ORTHO05D008928 3.6e-19 98.6 91 56.0
AT4G10100 Arabidopsis thaliana HOM05D001705 ORTHO05D008928 6.1e-19 97.8 84 57.1
A09p28840 Brassica napus HOM05D001705 ORTHO05D008928 6.1e-19 97.8 107 47.7
C09p36640 Brassica napus HOM05D001705 ORTHO05D008928 6.1e-19 97.8 107 47.7
BolC9t56496H Brassica oleracea HOM05D001705 ORTHO05D008928 6.1e-19 97.8 107 47.7
BraA09t38446Z Brassica rapa HOM05D001705 ORTHO05D008928 6.1e-19 97.8 107 47.7
Cpa.g.sc21.88 Carica papaya HOM05D001705 ORTHO05D008928 7.9e-19 97.4 83 57.8
Thhalv10029346m.g Eutrema salsugineum HOM05D001705 ORTHO05D008928 7.9e-19 97.4 84 56.0
Lsat_1_v5_gn_1_56320 Lactuca sativa HOM05D001705 ORTHO05D008928 7.9e-19 97.4 84 53.6
Thecc.08G179500 Theobroma cacao HOM05D001705 ORTHO05D008928 7.9e-19 97.4 81 56.8
BcaB04g18852 Brassica carinata HOM05D001705 ORTHO05D008928 1.0e-18 97.1 82 54.9
Sp6g07460 Schrenkiella parvula HOM05D001705 ORTHO05D008928 1.0e-18 97.1 84 56.0
Aa31LG9G11900 Aethionema arabicum HOM05D001705 ORTHO05D008928 1.4e-18 96.7 84 54.8
THA.LOC104815816 Tarenaya hassleriana HOM05D001705 ORTHO05D008928 1.4e-18 96.7 101 47.5
BcaC04g21016 Brassica carinata HOM05D001705 ORTHO05D008928 1.8e-18 96.3 84 56.0
Carub.0006s2867 Capsella rubella HOM05D001705 ORTHO05D008928 5.1e-18 94.7 82 53.7
ECA248G1877 Erigeron canadensis HOM05D001705 ORTHO05D008928 6.7e-18 94.4 80 56.2
CARHR261140 Cardamine hirsuta HOM05D001705 ORTHO05D008928 8.8e-18 94.0 82 54.9
AL6G43910 Arabidopsis lyrata HOM05D001705 ORTHO05D008928 1.1e-17 93.6 84 54.8
COL.COLO4_25141 Corchorus olitorius HOM05D001705 ORTHO05D008928 1.9e-17 92.8 81 55.6
ATR1089G014 Amborella trichopoda HOM05D001705 ORTHO05D008928 5.7e-17 91.3 82 54.9
Mapoly0053s0105 Marchantia polymorpha HOM05D001705 ORTHO05D008928 3.7e-16 88.6 115 43.5
SHI16716 Sapria himalayana HOM05D001705 ORTHO05D008928 1.4e-15 86.7 98 46.9
SMO119G0349 Selaginella moellendorffii HOM05D001705 ORTHO05D008928 1.4e-15 86.7 82 48.8
SEGI_06051 Sequoiadendron giganteum HOM05D001705 ORTHO05D008928 2.4e-15 85.9 80 51.2
SMO178G0001 Selaginella moellendorffii HOM05D001705 ORTHO05D008928 4.1e-15 85.1 82 48.8
VMungo0464G0569 Vigna mungo HOM05D001705 ORTHO05D008928 2.0e-14 82.8 70 55.7
Pp3c24_14090 Physcomitrium patens HOM05D001705 ORTHO05D008928 2.9e-13 79.0 80 43.8
Solyc02g090010.3 Solanum lycopersicum HOM05D001705 ORTHO05D008928 2.9e-13 79.0 61 60.7
CBR_g41370 Chara braunii HOM05D001705 ORTHO05D008928 1.4e-10 70.1 82 42.7
Cre08.g382545 Chlamydomonas reinhardtii HOM05D001705 ORTHO05D008928 1.1e-09 67.0 84 36.9
CBR_g5690 Chara braunii HOM05D001705 ORTHO05D008928 4.4e-09 65.1 80 43.8
MCO06G125 Micromonas commoda HOM05D001705 ORTHO05D008928 4.4e-09 65.1 85 42.4
BolC2t10291H Brassica oleracea HOM05D001705 ORTHO05D008928 1.7e-08 63.2 70 44.3


User provided reference genes

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