Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_013550 Vanilla planifolia HOM05D005624 ORTHO05D006896 8.7e-116 420.2 201 100.0
COL.COLO4_32213 Corchorus olitorius HOM05D005624 ORTHO05D006896 5.1e-92 341.3 203 82.3
CiPaw.05G096300 Carya illinoinensis HOM05D005624 ORTHO05D006896 2.6e-91 339.0 201 82.1
ClCG10G013180 Citrullus lanatus HOM05D005624 ORTHO05D006896 9.7e-91 337.0 201 81.1
MSTRG.8074 Avicennia marina HOM05D005624 ORTHO05D006896 4.8e-90 334.7 198 80.8
CSS0016097 Camellia sinensis var. sinensis HOM05D005624 ORTHO05D006896 4.8e-90 334.7 201 80.6
Prupe.1G209600 Prunus persica HOM05D005624 ORTHO05D006896 1.1e-89 333.6 202 79.7
PGR119G0553 Punica granatum HOM05D005624 ORTHO05D006896 1.4e-89 333.2 196 80.6
SalBow2G1530 Salvia bowleyana HOM05D005624 ORTHO05D006896 2.4e-89 332.4 193 80.8
QL03p047013 Quercus lobata HOM05D005624 ORTHO05D006896 3.1e-89 332.0 201 79.6
CsaV3_3G043430 Cucumis sativus L. HOM05D005624 ORTHO05D006896 5.3e-89 331.3 201 80.1
Actinidia33983 Actinidia chinensis HOM05D005624 ORTHO05D006896 7.0e-89 330.9 201 78.1
BraA03t09846Z Brassica rapa HOM05D005624 ORTHO05D006896 9.1e-89 330.5 204 77.5
BcaB01g05468 Brassica carinata HOM05D005624 ORTHO05D006896 1.2e-88 330.1 200 78.5
DCAR_028131 Daucus carota HOM05D005624 ORTHO05D006896 1.2e-88 330.1 200 76.5
TWI75G1298 Tripterygium wilfordii HOM05D005624 ORTHO05D006896 1.2e-88 330.1 198 79.8
AUR62008562 Chenopodium quinoa HOM05D005624 ORTHO05D006896 1.5e-88 329.7 201 79.1
Sed0005404 Sechium edule HOM05D005624 ORTHO05D006896 1.5e-88 329.7 201 80.1
CANSAT25G1757 Cannabis sativa HOM05D005624 ORTHO05D006896 2.0e-88 329.3 205 77.6
Ah.03g134040 Amaranthus hybridus HOM05D005624 ORTHO05D006896 2.6e-88 328.9 201 78.1
Atru.chr12.1491 Acer truncatum HOM05D005624 ORTHO05D006896 3.4e-88 328.6 201 80.6
C03p05810 Brassica napus HOM05D000602 ORTHO05D006896 3.4e-88 328.6 197 78.7
BolC3t13101H Brassica oleracea HOM05D005624 ORTHO05D006896 3.4e-88 328.6 197 78.7
MD13G1135700 Malus domestica HOM05D005624 ORTHO05D006896 3.4e-88 328.6 203 78.8
TAR622G0071 Trochodendron aralioides HOM05D005624 ORTHO05D006896 3.4e-88 328.6 206 77.7
Eucgr.J01702 Eucalyptus grandis HOM05D005624 ORTHO05D006896 4.5e-88 328.2 203 77.8
THA.LOC104811263 Tarenaya hassleriana HOM05D005624 ORTHO05D006896 5.9e-88 327.8 198 77.8
VMungo0251G1277 Vigna mungo HOM05D005624 ORTHO05D006896 5.9e-88 327.8 205 76.6
AL6G22400 Arabidopsis lyrata HOM05D005624 ORTHO05D006896 7.7e-88 327.4 204 76.5
Oeu032685.1 Olea europaea HOM05D005624 ORTHO05D006896 7.7e-88 327.4 199 78.4
Gohir.D08G238100 Gossypium hirsutum HOM05D005624 ORTHO05D006896 1.0e-87 327.0 203 76.8
Sp6g31930 Schrenkiella parvula HOM05D005624 ORTHO05D006896 1.0e-87 327.0 206 76.2
AT5G11680 Arabidopsis thaliana HOM05D005624 ORTHO05D006896 1.3e-87 326.6 204 76.5
Gohir.A08G221500 Gossypium hirsutum HOM05D005624 ORTHO05D006896 1.3e-87 326.6 201 77.6
Gorai.004G253600 Gossypium raimondii HOM05D005624 ORTHO05D006896 1.3e-87 326.6 203 76.4
AUR62033199 Chenopodium quinoa HOM05D005624 ORTHO05D006896 1.7e-87 326.2 201 78.1
Duzib128G1380 Durio zibethinus HOM05D005624 ORTHO05D006896 1.7e-87 326.2 203 77.3
Glyma.16G101200 Glycine max HOM05D005624 ORTHO05D006896 1.7e-87 326.2 205 76.1
Lj3A918T40 Lonicera japonica HOM05D005624 ORTHO05D006896 1.7e-87 326.2 200 78.0
MD16G1131300 Malus domestica HOM05D005624 ORTHO05D006896 1.7e-87 326.2 204 77.9
Migut.L00899 Erythranthe guttata HOM05D005624 ORTHO05D006896 2.2e-87 325.9 197 76.6
Glyma.08G266400 Glycine max HOM05D005624 ORTHO05D006896 2.9e-87 325.5 205 76.1
GSVIVG01001144001 Vitis vinifera HOM05D005624 ORTHO05D006896 2.9e-87 325.5 201 77.1
Cc11_g14800 Coffea canephora HOM05D005624 ORTHO05D006896 6.5e-87 324.3 202 76.7
Cfa020947 Carpinus fangiana HOM05D005624 ORTHO05D006896 8.5e-87 323.9 195 79.5
Haze_19383 Corylus avellana HOM05D005624 ORTHO05D006896 8.5e-87 323.9 195 79.5
Carub.0006s1018 Capsella rubella HOM05D005624 ORTHO05D006896 1.1e-86 323.6 204 76.0
Ciclev10005917m.g Citrus clementina HOM05D005624 ORTHO05D006896 1.1e-86 323.6 201 78.6
Hund05398 Selenicereus undatus HOM05D005624 ORTHO05D006896 1.1e-86 323.6 204 76.5
BcaC03g13386 Brassica carinata HOM05D005624 ORTHO05D006896 1.9e-86 322.8 201 76.1
CARHR201540 Cardamine hirsuta HOM05D005624 ORTHO05D006896 1.9e-86 322.8 204 75.0
Lj4g0021292 Lotus japonicus HOM05D005624 ORTHO05D006896 1.9e-86 322.8 204 77.5
Rhsim12G0090500 Rhododendron simsii HOM05D005624 ORTHO05D006896 1.9e-86 322.8 201 77.1
Thhalv10014678m.g Eutrema salsugineum HOM05D005624 ORTHO05D006896 2.5e-86 322.4 206 75.2
BolC2t06481H Brassica oleracea HOM05D005624 ORTHO05D006896 3.2e-86 322.0 203 75.4
Phvul.003G274200 Phaseolus vulgaris HOM05D005624 ORTHO05D006896 3.2e-86 322.0 208 73.6
FvH4_4g21930 Fragaria vesca HOM05D005624 ORTHO05D006896 7.2e-86 320.9 201 76.1
Peaxi162Scf00334g00119 Petunia axillaris HOM05D005624 ORTHO05D006896 7.2e-86 320.9 201 77.6
Aa31LG3G15530 Aethionema arabicum HOM05D000602 ORTHO05D001147 9.4e-86 320.5 204 75.0
Manes.08G097600 Manihot esculenta HOM05D005624 ORTHO05D006896 1.2e-85 320.1 201 77.6
unitig_22.g6367 Utricularia gibba HOM05D005624 ORTHO05D006896 1.2e-85 320.1 196 77.0
Aqoxy3G01649 Aquilegia oxysepala HOM05D005624 ORTHO05D006896 1.6e-85 319.7 196 78.1
Sed0018373 Sechium edule HOM05D005624 ORTHO05D006896 1.6e-85 319.7 202 77.7
Zm00001eb318180 Zea mays HOM05D005624 ORTHO05D006896 1.6e-85 319.7 204 74.5
PSO478G3843 Papaver somniferum HOM05D005624 ORTHO05D006896 2.1e-85 319.3 206 75.2
EL10Ac7g17520 Beta vulgaris HOM05D005624 ORTHO05D006896 3.6e-85 318.5 201 75.6
HanXRQChr10g0312121 Helianthus annuus HOM05D005624 ORTHO05D006896 3.6e-85 318.5 202 75.2
Thecc.05G235200 Theobroma cacao HOM05D005624 ORTHO05D006896 3.6e-85 318.5 203 75.4
TWI18G0768 Tripterygium wilfordii HOM05D005624 ORTHO05D006896 6.1e-85 317.8 205 74.1
FAN17G0486 Fragaria x ananassa HOM05D005624 ORTHO05D006896 1.0e-84 317.0 201 75.6
Nitab4.5_0001089g0030 Nicotiana tabacum HOM05D005624 ORTHO05D006896 3.0e-84 315.5 198 78.8
Sc17g0003450 Simmondsia chinensis HOM05D005624 ORTHO05D006896 3.0e-84 315.5 204 77.5
RcHm_v2.0_Chr4g0428141 Rosa chinensis HOM05D005624 ORTHO05D006896 3.9e-84 315.1 201 76.6
TPR.G6115 Trifolium pratense HOM05D005624 ORTHO05D006896 3.9e-84 315.1 209 72.7
ATR0582G264 Amborella trichopoda HOM05D005624 ORTHO05D006896 5.2e-84 314.7 207 72.9
CAN.G39.18 Capsicum annuum HOM05D005624 ORTHO05D006896 6.7e-84 314.3 193 78.2
Hma1.2p1_0562F.1_g179050 Hydrangea macrophylla HOM05D005624 ORTHO05D006896 6.7e-84 314.3 206 74.8
CiPaw.06G112400 Carya illinoinensis HOM05D005624 ORTHO05D006896 8.8e-84 313.9 213 75.1
Medtr8g070860 Medicago truncatula HOM05D005624 ORTHO05D006896 8.8e-84 313.9 205 75.1
Nitab4.5_0011777g0020 Nicotiana tabacum HOM05D005624 ORTHO05D006896 8.8e-84 313.9 198 77.8
PSO017G6046 Papaver somniferum HOM05D005624 ORTHO05D006896 8.8e-84 313.9 206 74.3
unitig_8.g3112 Utricularia gibba HOM05D005624 ORTHO05D006896 1.1e-83 313.5 222 68.5
Zm00001eb102600 Zea mays HOM05D005624 ORTHO05D006896 2.6e-83 312.4 204 72.5
Sopen02g002020 Solanum pennellii HOM05D005624 ORTHO05D006896 7.4e-83 310.8 193 77.7
arahy.Tifrunner.gnm1.ann1.CA7SJ1 Arachis hypogaea HOM05D005624 ORTHO05D006896 2.2e-82 309.3 200 74.5
arahy.Tifrunner.gnm1.ann1.YB0CZG Arachis hypogaea HOM05D005624 ORTHO05D006896 2.2e-82 309.3 200 74.5
Peaxi162Scf00681g00118 Petunia axillaris HOM05D005624 ORTHO05D006896 2.2e-82 309.3 198 76.3
Psat4g111480 Pisum sativum HOM05D005624 ORTHO05D006896 2.2e-82 309.3 196 74.5
Lsat_1_v5_gn_1_78160 Lactuca sativa HOM05D005624 ORTHO05D006896 2.8e-82 308.9 201 73.6
PGSC0003DMG400029983 Solanum tuberosum HOM05D005624 ORTHO05D006896 2.8e-82 308.9 193 77.2
Sabra01G0051200 Salix brachista HOM05D005624 ORTHO05D006896 3.7e-82 308.5 201 76.1
Potri.003G158200 Populus trichocarpa HOM05D005624 ORTHO05D006896 6.3e-82 307.8 201 76.1
ECA236G4393 Erigeron canadensis HOM05D000127 ORTHO05D000243 1.4e-81 306.6 193 74.6
Solyc02g005603.1 Solanum lycopersicum HOM05D005624 ORTHO05D006896 5.3e-81 304.7 193 76.7
Potri.001G072600 Populus trichocarpa HOM05D005624 ORTHO05D006896 7.0e-81 304.3 199 75.9
PGSC0003DMG402032565 Solanum tuberosum HOM05D005624 ORTHO05D006896 1.3e-79 300.1 198 74.2
Sopen04g004320 Solanum pennellii HOM05D005624 ORTHO05D006896 2.2e-79 299.3 198 73.7
Solyc04g009190.3 Solanum lycopersicum HOM05D005624 ORTHO05D006896 1.9e-78 296.2 198 73.2
MELO3C026760.2 Cucumis melo HOM05D005624 ORTHO05D006896 5.7e-75 284.6 169 80.5
A03p05080 Brassica napus HOM05D000602 ORTHO05D006896 1.3e-74 283.5 183 74.3
Lsat_1_v5_gn_5_173840 Lactuca sativa HOM05D005624 ORTHO05D006896 2.0e-72 276.2 194 68.0
HanXRQChr01g0012261 Helianthus annuus HOM05D005624 ORTHO05D006896 1.7e-71 273.1 196 64.8
Duzib177G0503 Durio zibethinus HOM05D005624 ORTHO05D006896 3.0e-68 262.3 203 66.5
Zm00001eb071390 Zea mays HOM05D005624 ORTHO05D006896 6.8e-68 261.2 171 74.3
SMO164G0111 Selaginella moellendorffii HOM05D005624 ORTHO05D006896 9.8e-67 257.3 198 61.1
vmacro16032 Vaccinium macrocarpon HOM05D005624 ORTHO05D006896 1.1e-65 253.8 159 76.7
Peaxi162Scf00021g02113 Petunia axillaris HOM05D005624 ORTHO05D006896 2.4e-65 252.7 193 63.2
Pp3c7_9270 Physcomitrium patens HOM05D005624 ORTHO05D006896 4.7e-61 238.4 207 58.9
MBI11_g04265_MAGBIO Magnolia biondii HOM05D005624 ORTHO05D006896 3.0e-60 235.7 159 71.1
Nitab4.5_0000069g0230 Nicotiana tabacum HOM05D005624 ORTHO05D006896 4.4e-59 231.9 199 61.3
Dinv02966 Davidia involucrata HOM05D005624 ORTHO05D006896 1.7e-58 229.9 140 80.7
Mapoly0097s0090 Marchantia polymorpha HOM05D005624 ORTHO05D006896 2.2e-58 229.6 204 54.4
Nitab4.5_0004301g0080 Nicotiana tabacum HOM05D005624 ORTHO05D006896 3.7e-58 228.8 201 59.7
AagrBONN_evm.TU.Sc2ySwM_117.3158 Anthoceros agrestis HOM05D005624 ORTHO05D006896 6.3e-58 228.0 203 56.2
Solyc01g008220.3 Solanum lycopersicum HOM05D005624 ORTHO05D006896 1.6e-56 223.4 193 61.1
MBI07_g41258_MAGBIO Magnolia biondii HOM05D005624 ORTHO05D006896 1.1e-54 217.2 132 79.5
CAN.G619.7 Capsicum annuum HOM05D005624 ORTHO05D006896 4.0e-52 208.8 143 72.7
Lalb_Chr05g0228971 Lupinus albus HOM05D005624 ORTHO05D006896 1.7e-50 203.4 124 75.0
Gohir.A13G159151 Gossypium hirsutum HOM05D005624 ORTHO05D006896 7.3e-46 188.0 136 71.3
Gorai.013G198700 Gossypium raimondii HOM05D005624 ORTHO05D006896 2.8e-45 186.0 141 68.8
Zm00001eb052330 Zea mays HOM05D005624 ORTHO05D006896 2.6e-43 179.5 119 72.3
Zm00001eb036000 Zea mays HOM05D005624 ORTHO05D006896 5.8e-43 178.3 119 72.3
PGSC0003DMG400016363 Solanum tuberosum HOM05D005624 ORTHO05D006896 9.8e-43 177.6 155 60.6
Migut.L00595 Erythranthe guttata HOM05D005624 ORTHO05D006896 6.0e-40 168.3 97 77.3
CBR_g24147 Chara braunii HOM05D005624 ORTHO05D006896 1.2e-37 160.6 159 52.2
C02p05330 Brassica napus HOM05D005624 ORTHO05D006896 1.1e-30 137.5 94 72.3
Cre03.g189100 Chlamydomonas reinhardtii HOM05D005624 ORTHO05D006896 1.4e-28 130.6 201 39.8
CAN.G282.51 Capsicum annuum HOM05D005624 ORTHO05D006896 6.8e-28 128.3 201 44.3
CSS0031660 Camellia sinensis var. sinensis HOM05D005624 ORTHO05D006896 7.1e-25 118.2 87 69.0
Cc10_g16310 Coffea canephora HOM05D005624 ORTHO05D006896 3.0e-23 112.8 79 67.1
Cc08_g00010 Coffea canephora HOM05D005624 ORTHO05D006896 3.9e-23 112.5 75 68.0
Cc06_g22650 Coffea canephora HOM05D005624 ORTHO05D006896 9.0e-20 101.3 75 65.3
SEGI_14660 Sequoiadendron giganteum HOM05D005624 ORTHO05D006896 2.0e-19 100.1 68 69.1
Dinv02968 Davidia involucrata HOM05D005624 ORTHO05D006896 1.4e-12 77.4 37 91.9
Os09g0512900 Oryza sativa ssp. japonica HOM05D005624 ORTHO05D006896 2.1e-08 63.5 36 80.6
Lsat_1_v5_gn_4_78441 Lactuca sativa HOM05D005624 ORTHO05D006896 5.1e-07 58.9 41 63.4
Lalb_Chr05g0228961 Lupinus albus HOM05D005624 ORTHO05D006896 1.5e-06 57.4 35 77.1
SEGI_32969 Sequoiadendron giganteum HOM05D005624 ORTHO05D006896 2.5e-06 56.6 31 80.6


User provided reference genes

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