Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_013529 Vanilla planifolia HOM05D006867 ORTHO05D008676 0.0e+00 1215.3 621 100.0
MBI11_g13783_MAGBIO Magnolia biondii HOM05D006867 ORTHO05D008676 2.4e-204 716.1 627 60.6
Zm00001eb102740 Zea mays HOM05D006867 ORTHO05D008676 4.6e-200 701.8 638 59.9
Os09g0514900 Oryza sativa ssp. japonica HOM05D006867 ORTHO05D008676 6.3e-197 691.4 631 57.7
TAR629G2918 Trochodendron aralioides HOM05D006867 ORTHO05D008676 8.5e-194 681.0 643 58.0
ATR0824G236 Amborella trichopoda HOM05D006867 ORTHO05D008676 1.4e-193 680.2 638 54.5
PSO782G1247 Papaver somniferum HOM05D006867 ORTHO05D008676 1.2e-187 660.6 646 55.3
Actinidia08011 Actinidia chinensis HOM05D006867 ORTHO05D008676 4.7e-184 648.7 633 55.1
Manes.01G237400 Manihot esculenta HOM05D006867 ORTHO05D008676 6.1e-184 648.3 630 55.2
Lj9A610G56 Lonicera japonica HOM05D006867 ORTHO05D008676 1.5e-182 643.7 641 53.7
Aqoxy5G04385 Aquilegia oxysepala HOM05D006867 ORTHO05D008676 1.7e-181 640.2 626 53.8
Dinv32661 Davidia involucrata HOM05D006867 ORTHO05D008676 2.8e-181 639.4 658 52.9
GSVIVG01027485001 Vitis vinifera HOM05D006867 ORTHO05D008676 8.2e-181 637.9 627 53.3
Thecc.01G329400 Theobroma cacao HOM05D006867 ORTHO05D008676 5.3e-180 635.2 650 53.7
Haze_15774 Corylus avellana HOM05D006867 ORTHO05D008676 2.0e-179 633.3 622 54.8
Nitab4.5_0004754g0040 Nicotiana tabacum HOM05D006867 ORTHO05D008676 2.6e-179 632.9 640 52.7
CANSAT56G0208 Cannabis sativa HOM05D006867 ORTHO05D008676 7.7e-179 631.3 638 54.7
COL.COLO4_23081 Corchorus olitorius HOM05D006867 ORTHO05D008676 7.7e-179 631.3 631 53.4
CiPaw.02G046400 Carya illinoinensis HOM05D006867 ORTHO05D008676 1.0e-178 630.9 635 53.2
QL08p048171 Quercus lobata HOM05D006867 ORTHO05D008676 2.2e-178 629.8 636 53.6
Oeu032684.1 Olea europaea HOM05D006867 ORTHO05D008676 5.0e-178 628.6 650 54.0
CANSAT56G2490 Cannabis sativa HOM05D006867 ORTHO05D008676 8.5e-178 627.9 638 54.5
Potri.002G183500 Populus trichocarpa HOM05D006867 ORTHO05D008676 8.5e-178 627.9 632 54.0
Potri.014G109500 Populus trichocarpa HOM05D006867 ORTHO05D008676 8.5e-178 627.9 636 53.8
Cc00_g15760 Coffea canephora HOM05D006867 ORTHO05D008676 1.1e-177 627.5 641 52.4
Migut.I01214 Erythranthe guttata HOM05D006867 ORTHO05D008676 6.1e-176 621.7 654 51.4
Sabra14G0080800 Salix brachista HOM05D006867 ORTHO05D008676 1.4e-175 620.5 622 53.9
HanXRQChr15g0480381 Helianthus annuus HOM05D006867 ORTHO05D008676 2.3e-175 619.8 613 53.2
Ciclev10019260m.g Citrus clementina HOM05D006867 ORTHO05D008676 3.0e-175 619.4 622 51.6
HanXRQChr17g0542101 Helianthus annuus HOM05D006867 ORTHO05D008676 5.2e-175 618.6 640 53.0
CAN.G90.6 Capsicum annuum HOM05D006867 ORTHO05D008676 2.6e-174 616.3 633 52.4
vmacro08516 Vaccinium macrocarpon HOM05D006867 ORTHO05D008676 2.6e-174 616.3 524 59.4
Prupe.2G203900 Prunus persica HOM05D006867 ORTHO05D008676 7.4e-174 614.8 626 51.0
Nitab4.5_0000348g0180 Nicotiana tabacum HOM05D006867 ORTHO05D008676 1.3e-173 614.0 516 58.3
Ah.01g010880 Amaranthus hybridus HOM05D006867 ORTHO05D008676 3.7e-173 612.5 633 52.6
Cfa003709 Carpinus fangiana HOM05D006867 ORTHO05D008676 3.7e-173 612.5 624 53.2
Lj3g0022605 Lotus japonicus HOM05D006867 ORTHO05D008676 4.8e-173 612.1 628 54.8
Phvul.010G121700 Phaseolus vulgaris HOM05D006867 ORTHO05D008676 1.1e-172 610.9 644 51.7
THA.LOC104817409 Tarenaya hassleriana HOM05D006867 ORTHO05D008676 1.4e-172 610.5 627 52.6
VMungo0331G1883 Vigna mungo HOM05D006867 ORTHO05D008676 1.4e-172 610.5 641 53.0
AUR62039056 Chenopodium quinoa HOM05D006867 ORTHO05D008676 3.1e-172 609.4 631 52.6
Atru.chr5.813 Acer truncatum HOM05D006867 ORTHO05D008676 9.1e-172 607.8 624 52.1
arahy.Tifrunner.gnm1.ann1.Y7T28V Arachis hypogaea HOM05D006867 ORTHO05D008676 1.2e-171 607.4 656 51.5
Sabra02G0132100 Salix brachista HOM05D006867 ORTHO05D008676 1.2e-171 607.4 634 52.7
Gohir.A12G118400 Gossypium hirsutum HOM05D006867 ORTHO05D008676 1.6e-171 607.1 629 51.7
SalBow6G1414 Salvia bowleyana HOM05D006867 ORTHO05D008676 1.6e-171 607.1 645 49.8
Glyma.16G015800 Glycine max HOM05D006867 ORTHO05D008676 2.0e-171 606.7 636 52.8
arahy.Tifrunner.gnm1.ann1.L7530T Arachis hypogaea HOM05D006867 ORTHO05D008676 2.6e-171 606.3 656 51.4
Lsat_1_v5_gn_3_39660 Lactuca sativa HOM05D006867 ORTHO05D008676 3.5e-171 605.9 656 51.4
Glyma.07G047300 Glycine max HOM05D006867 ORTHO05D008676 4.5e-171 605.5 629 52.9
Gorai.008G133000 Gossypium raimondii HOM05D006867 ORTHO05D008676 4.5e-171 605.5 627 52.0
EL10Ac9g22256 Beta vulgaris HOM05D006867 ORTHO05D008676 5.9e-171 605.1 637 52.6
Gohir.D12G122200 Gossypium hirsutum HOM05D006867 ORTHO05D008676 1.0e-170 604.4 629 52.0
Sc08g0001320 Simmondsia chinensis HOM05D006867 ORTHO05D008676 1.7e-170 603.6 619 53.3
Aa31LG1G28260 Aethionema arabicum HOM05D006867 ORTHO05D008676 3.8e-170 602.4 516 55.8
AUR62010330 Chenopodium quinoa HOM05D006867 ORTHO05D008676 6.5e-170 601.7 637 51.5
Lalb_Chr17g0343131 Lupinus albus HOM05D006867 ORTHO05D008676 8.5e-170 601.3 648 52.6
MSTRG.10869 Avicennia marina HOM05D006867 ORTHO05D008676 1.1e-169 600.9 645 51.6
Sopen08g006420 Solanum pennellii HOM05D006867 ORTHO05D008676 1.5e-169 600.5 637 49.9
Rhsim04G0175800 Rhododendron simsii HOM05D006867 ORTHO05D008676 1.9e-169 600.1 579 54.1
MD07G1165200 Malus domestica HOM05D006867 ORTHO05D008676 3.2e-169 599.4 645 52.2
FAN06G0390 Fragaria x ananassa HOM05D006867 ORTHO05D008676 1.2e-168 597.4 625 51.5
Lalb_Chr10g0101011 Lupinus albus HOM05D006867 ORTHO05D008676 1.0e-167 594.3 640 52.0
Sed0008932 Sechium edule HOM05D006867 ORTHO05D008676 4.0e-167 592.4 621 50.9
FvH4_7g18270 Fragaria vesca HOM05D006867 ORTHO05D008676 7.5e-166 588.2 625 51.2
MD01G1098500 Malus domestica HOM05D006867 ORTHO05D008676 1.3e-165 587.4 630 52.1
RcHm_v2.0_Chr1g0361851 Rosa chinensis HOM05D006867 ORTHO05D008676 1.3e-165 587.4 623 50.6
Hund00158 Selenicereus undatus HOM05D006867 ORTHO05D008676 1.7e-165 587.0 644 52.2
FAN01G1143 Fragaria x ananassa HOM05D006867 ORTHO05D008676 2.8e-165 586.3 517 55.3
FAN03G0961 Fragaria x ananassa HOM05D006867 ORTHO05D008676 2.8e-165 586.3 517 55.3
FAN06G3784 Fragaria x ananassa HOM05D006867 ORTHO05D008676 4.8e-165 585.5 625 51.0
SGA_v2.0_scaffold122G33256 Striga asiatica HOM05D006867 ORTHO05D008676 4.8e-165 585.5 590 52.9
Psat0s2980g0160 Pisum sativum HOM05D006867 ORTHO05D008676 8.3e-165 584.7 632 51.1
Ca_23461_v3 Cicer arietinum L. HOM05D006867 ORTHO05D008676 1.1e-164 584.3 636 51.1
Ca_23474_v3 Cicer arietinum L. HOM05D006867 ORTHO05D008676 1.1e-164 584.3 636 51.1
Medtr8g023750 Medicago truncatula HOM05D006867 ORTHO05D008676 1.8e-164 583.6 633 50.9
TPR.G32787 Trifolium pratense HOM05D006867 ORTHO05D008676 5.3e-164 582.0 632 52.2
CsaV3_3G007140 Cucumis sativus L. HOM05D006867 ORTHO05D008676 3.5e-163 579.3 627 50.6
FAN10G4369 Fragaria x ananassa HOM05D006867 ORTHO05D008676 5.9e-163 578.6 626 50.8
TWI59G0124 Tripterygium wilfordii HOM05D006867 ORTHO05D008676 1.7e-162 577.0 634 50.6
CARHR142250 Cardamine hirsuta HOM05D006867 ORTHO05D008676 2.2e-162 576.6 525 54.3
AL4G46360 Arabidopsis lyrata HOM05D006867 ORTHO05D008676 2.9e-162 576.2 637 49.6
Hma1.2p1_0074F.1_g039020 Hydrangea macrophylla HOM05D006867 ORTHO05D008676 1.5e-161 573.9 443 60.9
Eucgr.L00743 Eucalyptus grandis HOM05D006867 ORTHO05D008676 3.2e-161 572.8 634 50.0
ClCG05G000080 Citrullus lanatus HOM05D006867 ORTHO05D008676 9.4e-161 571.2 516 54.5
FAN10G3600 Fragaria x ananassa HOM05D006867 ORTHO05D008676 9.4e-161 571.2 626 50.5
Carub.0004s2962 Capsella rubella HOM05D006867 ORTHO05D008676 1.4e-159 567.4 634 49.2
AT2G46900 Arabidopsis thaliana HOM05D006867 ORTHO05D008676 1.8e-159 567.0 626 49.0
Sp4g28920 Schrenkiella parvula HOM05D006867 ORTHO05D008676 4.0e-159 565.8 623 47.7
ECA246G2438 Erigeron canadensis HOM05D006867 ORTHO05D008676 1.3e-157 560.8 623 51.2
Thhalv10001357m.g Eutrema salsugineum HOM05D006867 ORTHO05D008676 3.1e-156 556.2 628 48.2
FAN01G0521 Fragaria x ananassa HOM05D006867 ORTHO05D008676 1.2e-152 544.3 457 55.6
C04p01080 Brassica napus HOM05D006867 ORTHO05D008676 4.7e-152 542.3 505 52.7
A05p00940 Brassica napus HOM05D006867 ORTHO05D008676 1.2e-150 537.7 625 47.4
BolC4t21761H Brassica oleracea HOM05D006867 ORTHO05D008676 2.0e-150 537.0 637 47.4
CSS0030251 Camellia sinensis var. sinensis HOM05D006867 ORTHO05D008676 4.3e-145 519.2 546 50.7
DCAR_022120 Daucus carota HOM05D006867 ORTHO05D008676 2.0e-142 510.4 631 45.2
Peaxi162Scf01205g00180 Petunia axillaris HOM05D006867 ORTHO05D008676 5.4e-140 502.3 387 59.4
CDE09G1372 Ceratophyllum demersum HOM05D006867 ORTHO05D008676 1.0e-130 471.5 497 50.5
Pp3c1_12740 Physcomitrium patens HOM05D006867 ORTHO05D008676 1.9e-129 467.2 648 44.3
BcaC02g12633 Brassica carinata HOM05D006867 ORTHO05D008676 1.4e-124 451.1 627 43.1
Pp3c11_2510 Physcomitrium patens HOM05D006867 ORTHO05D008676 3.9e-122 443.0 591 45.9
SMO331G0055 Selaginella moellendorffii HOM05D006867 ORTHO05D008676 6.6e-122 442.2 478 47.7
Cpa.g.sc1043.2 Carica papaya HOM05D006867 ORTHO05D008676 6.8e-119 432.2 349 58.7
AagrBONN_evm.TU.Sc2ySwM_344.4360 Anthoceros agrestis HOM05D006867 ORTHO05D008676 4.4e-118 429.5 573 42.9
Mapoly0002s0219 Marchantia polymorpha HOM05D006867 ORTHO05D008676 2.7e-115 420.2 486 46.1
MELO3C005936.2 Cucumis melo HOM05D006867 ORTHO05D008676 5.6e-113 412.5 346 55.5
Cre11.g467639 Chlamydomonas reinhardtii HOM05D006867 ORTHO05D008676 1.1e-84 318.5 519 37.4
CBR_g36359 Chara braunii HOM05D006867 ORTHO05D008676 4.2e-84 316.6 680 31.2
PRCOL_00004033 Prasinoderma coloniale HOM05D006867 ORTHO05D008676 1.2e-59 235.3 652 31.4
MCO10G037 Micromonas commoda HOM05D006867 ORTHO05D008676 2.2e-53 214.5 489 29.0
Solyc08g016090.4 Solanum lycopersicum HOM05D006867 ORTHO05D008676 2.1e-43 181.4 410 29.3
C04p72500 Brassica napus HOM05D006867 ORTHO05D008676 3.4e-25 120.9 98 57.1
BolC4t28738H Brassica oleracea HOM05D006867 ORTHO05D008676 3.4e-25 120.9 98 57.1
A04p34720 Brassica napus HOM05D006867 ORTHO05D008676 8.3e-24 116.3 106 53.8
Cfa022788 Carpinus fangiana HOM05D006867 ORTHO05D008676 2.5e-20 104.8 378 25.9


User provided reference genes

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