Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_013452 Vanilla planifolia HOM05D007121 ORTHO05D009116 2.9e-104 382.1 219 100.0
HPP92_013454 Vanilla planifolia HOM05D007121 ORTHO05D009116 4.8e-67 258.5 204 79.4
MBI03_g28961_MAGBIO Magnolia biondii HOM05D007121 ORTHO05D009116 1.4e-50 203.8 149 68.5
ATR1089G073 Amborella trichopoda HOM05D007121 ORTHO05D009116 4.5e-49 198.7 157 64.3
Manes.07G083700 Manihot esculenta HOM05D007121 ORTHO05D009116 1.0e-48 197.6 173 61.3
Dinv37393 Davidia involucrata HOM05D007121 ORTHO05D009116 1.4e-47 193.7 163 63.2
Nn5g27126 Nelumbo nucifera HOM05D007121 ORTHO05D009116 1.4e-47 193.7 159 63.5
Prupe.3G000100 Prunus persica HOM05D007121 ORTHO05D009116 2.5e-47 193.0 172 59.3
Actinidia09045 Actinidia chinensis HOM05D007121 ORTHO05D009116 5.5e-47 191.8 171 59.6
CAN.G746.3 Capsicum annuum HOM05D007121 ORTHO05D009116 5.5e-47 191.8 182 56.6
Glyma.16G207000 Glycine max HOM05D007121 ORTHO05D009116 5.5e-47 191.8 141 68.8
Lj2g0026463 Lotus japonicus HOM05D007121 ORTHO05D009116 5.5e-47 191.8 165 60.0
Sabra19G0077000 Salix brachista HOM05D007121 ORTHO05D009116 9.4e-47 191.0 166 57.2
Sopen11g020950 Solanum pennellii HOM05D007121 ORTHO05D009116 9.4e-47 191.0 182 56.0
PGSC0003DMG400009256 Solanum tuberosum HOM05D007121 ORTHO05D009116 9.4e-47 191.0 182 56.6
TAR381G0948 Trochodendron aralioides HOM05D007121 ORTHO05D009116 9.4e-47 191.0 159 62.3
GSVIVG01037090001 Vitis vinifera HOM05D007121 ORTHO05D009116 9.4e-47 191.0 166 60.8
MSTRG.21285 Avicennia marina HOM05D007121 ORTHO05D009116 1.2e-46 190.7 176 58.0
Solyc11g020590.2 Solanum lycopersicum HOM05D007121 ORTHO05D009116 1.2e-46 190.7 182 55.5
TWI79G1141 Tripterygium wilfordii HOM05D007121 ORTHO05D009116 1.6e-46 190.3 148 66.2
Duzib116G0635 Durio zibethinus HOM05D007121 ORTHO05D009116 2.1e-46 189.9 150 64.7
Sabra19G0079800 Salix brachista HOM05D007121 ORTHO05D009116 2.7e-46 189.5 166 57.2
Migut.D00783 Erythranthe guttata HOM05D007121 ORTHO05D009116 6.1e-46 188.3 174 57.5
MD17G1285500 Malus domestica HOM05D007121 ORTHO05D009116 6.1e-46 188.3 173 57.2
Potri.019G063800 Populus trichocarpa HOM05D007121 ORTHO05D009116 6.1e-46 188.3 166 57.8
Lalb_Chr03g0033281 Lupinus albus HOM05D007121 ORTHO05D009116 1.0e-45 187.6 144 67.4
TWI79G1709 Tripterygium wilfordii HOM05D007121 ORTHO05D009116 1.0e-45 187.6 148 64.9
vmacro00902 Vaccinium macrocarpon HOM05D007121 ORTHO05D009116 1.4e-45 187.2 159 62.3
Psat1g112760 Pisum sativum HOM05D007121 ORTHO05D009116 1.8e-45 186.8 179 55.3
COL.COLO4_25112 Corchorus olitorius HOM05D007121 ORTHO05D009116 2.3e-45 186.4 149 63.8
CSS0045313 Camellia sinensis var. sinensis HOM05D007121 ORTHO05D009116 3.0e-45 186.0 159 59.7
Medtr6g059330 Medicago truncatula HOM05D007121 ORTHO05D009116 3.0e-45 186.0 177 55.9
Thecc.08G167200 Theobroma cacao HOM05D007121 ORTHO05D009116 3.0e-45 186.0 165 59.4
unitig_62.g23943 Utricularia gibba HOM05D007121 ORTHO05D009116 3.0e-45 186.0 159 59.1
Hma1.2p1_0378F.1_g139780 Hydrangea macrophylla HOM05D007121 ORTHO05D009116 3.9e-45 185.7 159 61.0
EL10Ac9g21548 Beta vulgaris HOM05D007121 ORTHO05D009116 5.1e-45 185.3 165 60.6
CDE04G1200 Ceratophyllum demersum HOM05D007121 ORTHO05D009116 6.7e-45 184.9 167 56.9
RcHm_v2.0_Chr6g0281061 Rosa chinensis HOM05D007121 ORTHO05D009116 8.8e-45 184.5 176 54.5
AUR62013185 Chenopodium quinoa HOM05D007121 ORTHO05D009116 1.1e-44 184.1 156 62.8
HanXRQChr08g0227551 Helianthus annuus HOM05D007121 ORTHO05D009116 1.5e-44 183.7 149 62.4
Eucgr.F02930 Eucalyptus grandis HOM05D007121 ORTHO05D009116 2.0e-44 183.3 176 55.1
Phvul.004G131500 Phaseolus vulgaris HOM05D007121 ORTHO05D009116 2.0e-44 183.3 141 64.5
Gorai.004G265300 Gossypium raimondii HOM05D007121 ORTHO05D009116 2.6e-44 183.0 148 62.8
Nitab4.5_0003818g0010 Nicotiana tabacum HOM05D007121 ORTHO05D009116 2.6e-44 183.0 173 57.2
Ah.01g010290 Amaranthus hybridus HOM05D007121 ORTHO05D009116 3.3e-44 182.6 171 59.1
Os01g0887400 Oryza sativa ssp. japonica HOM05D007121 ORTHO05D009116 3.3e-44 182.6 158 58.9
Hund06356 Selenicereus undatus HOM05D007121 ORTHO05D009116 3.3e-44 182.6 158 60.8
FvH4_2g16920 Fragaria vesca HOM05D007121 ORTHO05D009116 4.4e-44 182.2 176 53.4
FAN24G2591 Fragaria x ananassa HOM05D007121 ORTHO05D009116 4.4e-44 182.2 176 53.4
TPR.G5822 Trifolium pratense HOM05D007121 ORTHO05D009116 4.4e-44 182.2 157 59.2
FAN15G1171 Fragaria x ananassa HOM05D007121 ORTHO05D009116 5.7e-44 181.8 158 57.6
Lsat_1_v5_gn_1_24881 Lactuca sativa HOM05D000912 ORTHO05D001232 5.7e-44 181.8 161 57.8
Rhsim12G0000200 Rhododendron simsii HOM05D007121 ORTHO05D009116 5.7e-44 181.8 176 56.8
SGA_v2.0_scaffold158G37477 Striga asiatica HOM05D007121 ORTHO05D009116 5.7e-44 181.8 169 56.8
Gohir.D08G248700 Gossypium hirsutum HOM05D007121 ORTHO05D009116 7.4e-44 181.4 148 62.2
AUR62010183 Chenopodium quinoa HOM05D007121 ORTHO05D009116 9.7e-44 181.0 159 61.6
Cc11_g03660 Coffea canephora HOM05D007121 ORTHO05D009116 1.7e-43 180.3 158 58.9
MELO3C022111.2 Cucumis melo HOM05D007121 ORTHO05D009116 1.7e-43 180.3 160 61.9
Sc13g0008970 Simmondsia chinensis HOM05D007121 ORTHO05D009116 1.7e-43 180.3 148 71.6
Oeu023908.1 Olea europaea HOM05D007121 ORTHO05D009116 2.2e-43 179.9 206 49.5
Haze_14021 Corylus avellana HOM05D007121 ORTHO05D009116 3.7e-43 179.1 154 59.7
CsaV3_5G039330 Cucumis sativus L. HOM05D007121 ORTHO05D009116 3.7e-43 179.1 160 61.2
PSO170G2993 Papaver somniferum HOM05D007121 ORTHO05D009116 3.7e-43 179.1 156 58.3
PSO017G0193 Papaver somniferum HOM05D007121 ORTHO05D009116 4.8e-43 178.7 187 52.9
arahy.Tifrunner.gnm1.ann1.MG1LG0 Arachis hypogaea HOM05D007121 ORTHO05D009116 6.3e-43 178.3 159 56.0
arahy.Tifrunner.gnm1.ann1.S3NXR5 Arachis hypogaea HOM05D007121 ORTHO05D009116 6.3e-43 178.3 159 56.0
FAN27G1381 Fragaria x ananassa HOM05D007121 ORTHO05D009116 6.3e-43 178.3 174 53.4
VMungo0464G1683 Vigna mungo HOM05D007121 ORTHO05D009116 6.3e-43 178.3 149 63.1
DCAR_014756 Daucus carota HOM05D007121 ORTHO05D009116 8.2e-43 177.9 186 52.7
Zm00001eb064170 Zea mays HOM05D007121 ORTHO05D009116 8.2e-43 177.9 143 62.2
Nitab4.5_0000365g0210 Nicotiana tabacum HOM05D007121 ORTHO05D009116 1.8e-42 176.8 159 59.1
CiPaw.04G007900 Carya illinoinensis HOM05D007121 ORTHO05D009116 2.4e-42 176.4 155 56.8
Rhsim05G0000300 Rhododendron simsii HOM05D007121 ORTHO05D009116 2.4e-42 176.4 162 58.6
SHI18638 Sapria himalayana HOM05D007121 ORTHO05D009116 2.4e-42 176.4 153 58.8
C06p12400 Brassica napus HOM05D007121 ORTHO05D009116 4.1e-42 175.6 173 56.1
ClCG08G001950 Citrullus lanatus HOM05D007121 ORTHO05D009116 1.5e-41 173.7 172 56.4
Sed0003038 Sechium edule HOM05D007121 ORTHO05D009116 2.0e-41 173.3 166 55.4
Ca_25244_v3 Cicer arietinum L. HOM05D005833 ORTHO05D008135 3.4e-41 172.6 127 67.7
Thhalv10008542m.g Eutrema salsugineum HOM05D007121 ORTHO05D009116 7.7e-41 171.4 141 61.0
BcaC08g43856 Brassica carinata HOM05D007121 ORTHO05D009116 1.3e-40 170.6 179 54.2
BolC6t36394H Brassica oleracea HOM05D007121 ORTHO05D009116 1.3e-40 170.6 179 54.2
PGR142G3205 Punica granatum HOM05D007121 ORTHO05D009116 1.3e-40 170.6 179 53.1
Aa31LG6G7900 Aethionema arabicum HOM05D007121 ORTHO05D009116 2.2e-40 169.9 165 55.2
BraA09t38818Z Brassica rapa HOM05D007121 ORTHO05D009116 2.2e-40 169.9 175 53.1
BcaB07g32986 Brassica carinata HOM05D007121 ORTHO05D009116 2.9e-40 169.5 162 54.9
A09p32830 Brassica napus HOM05D007121 ORTHO05D009116 2.9e-40 169.5 141 61.0
QL09p001085 Quercus lobata HOM05D007121 ORTHO05D009116 3.8e-40 169.1 159 55.3
THA.LOC104806483 Tarenaya hassleriana HOM05D007121 ORTHO05D009116 8.5e-40 167.9 165 53.3
Carub.0001s3151 Capsella rubella HOM05D007121 ORTHO05D009116 4.2e-39 165.6 167 53.9
Gohir.A08G228400 Gossypium hirsutum HOM05D007121 ORTHO05D009116 4.2e-39 165.6 132 64.4
Sp1g28820 Schrenkiella parvula HOM05D007121 ORTHO05D009116 7.2e-39 164.9 148 58.1
Zm00001eb231390 Zea mays HOM05D007121 ORTHO05D009116 9.4e-39 164.5 138 60.9
AT1G33330 Arabidopsis thaliana HOM05D007121 ORTHO05D009116 1.2e-38 164.1 148 57.4
CARHR032780 Cardamine hirsuta HOM05D007121 ORTHO05D009116 2.1e-38 163.3 141 60.3
Lj7C414G3 Lonicera japonica HOM05D000916 ORTHO05D007921 2.1e-38 163.3 167 53.3
AL1G47750 Arabidopsis lyrata HOM05D007121 ORTHO05D009116 2.7e-38 162.9 167 52.7
Aqoxy6G00014 Aquilegia oxysepala HOM05D007121 ORTHO05D009116 3.0e-37 159.5 167 52.1
ECA247G1226 Erigeron canadensis HOM05D000912 ORTHO05D001232 1.3e-35 154.1 119 65.5
Peaxi162Scf00391g00430 Petunia axillaris HOM05D007121 ORTHO05D009116 2.8e-35 152.9 162 52.5
Atru.chr1.3623 Acer truncatum HOM05D007121 ORTHO05D009116 4.8e-35 152.1 146 57.5
Zm00001eb327850 Zea mays HOM05D007121 ORTHO05D009116 1.7e-32 143.7 168 48.2
Glyma.09G156302 Glycine max HOM05D007121 ORTHO05D009116 2.9e-32 142.9 138 55.1
Mapoly0024s0098 Marchantia polymorpha HOM05D007121 ORTHO05D009116 7.2e-31 138.3 141 48.9
SMO141G0210 Selaginella moellendorffii HOM05D007121 ORTHO05D009116 8.8e-29 131.3 149 54.4
Pp3c18_21640 Physcomitrium patens HOM05D007121 ORTHO05D009116 3.5e-25 119.4 170 42.4
AagrBONN_evm.TU.Sc2ySwM_228.1611 Anthoceros agrestis HOM05D007121 ORTHO05D009116 1.9e-23 113.6 123 50.4
Prupe.5G206900 Prunus persica HOM05D007121 ORTHO05D009116 2.7e-22 109.8 74 74.3
Zm00001eb150220 Zea mays HOM05D007121 ORTHO05D009116 2.3e-21 106.7 74 66.2
CBR_g50009 Chara braunii HOM05D007121 ORTHO05D009116 1.8e-18 97.1 144 38.9
Zm00001eb145380 Zea mays HOM05D007121 ORTHO05D009116 5.0e-16 89.0 55 74.5
Zm00001eb346490 Zea mays HOM05D007121 ORTHO05D009116 4.2e-15 85.9 136 41.2
PRCOL_00001818 Prasinoderma coloniale HOM05D007121 ORTHO05D009116 1.2e-14 84.3 150 37.3
Pp3c6_3690 Physcomitrium patens HOM05D007121 ORTHO05D009116 4.7e-14 82.4 106 40.6
AL8G14930 Arabidopsis lyrata HOM05D000831 ORTHO05D000660 3.6e-06 56.2 35 62.9


User provided reference genes

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