Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_013426 Vanilla planifolia HOM05D004963 ORTHO05D006638 0.0e+00 1302.7 655 100.0
Dinv35107 Davidia involucrata HOM05D004963 ORTHO05D006638 3.8e-136 489.6 855 36.1
TAR629G0020 Trochodendron aralioides HOM05D004963 ORTHO05D006638 1.1e-135 488.0 853 37.2
GSVIVG01032403001 Vitis vinifera HOM05D004963 ORTHO05D006638 1.9e-135 487.3 866 35.9
Zm00001eb096130 Zea mays HOM05D004963 ORTHO05D006638 1.9e-135 487.3 861 37.2
Aqoxy5G03770 Aquilegia oxysepala HOM05D004963 ORTHO05D006638 1.2e-129 468.0 859 35.6
PSO067G0032 Papaver somniferum HOM05D004963 ORTHO05D006638 1.7e-128 464.2 849 35.1
PSO063G6295 Papaver somniferum HOM05D004963 ORTHO05D006638 6.5e-128 462.2 849 34.5
CiPaw.03G043900 Carya illinoinensis HOM05D004963 ORTHO05D006638 2.5e-127 460.3 846 34.8
PGR083G0595 Punica granatum HOM05D004963 ORTHO05D006638 6.7e-125 452.2 846 34.4
Duzib147G0997 Durio zibethinus HOM05D004963 ORTHO05D006638 1.1e-124 451.4 844 34.7
TWI56G0249 Tripterygium wilfordii HOM05D004963 ORTHO05D006638 7.5e-124 448.7 865 34.7
Lju41A42T102 Lonicera japonica HOM05D004963 ORTHO05D006638 1.2e-121 441.4 844 34.2
Gohir.A09G029300 Gossypium hirsutum HOM05D004963 ORTHO05D006638 1.6e-121 441.0 845 34.2
Potri.001G345100 Populus trichocarpa HOM05D004963 ORTHO05D006638 5.5e-119 432.6 843 32.9
Prupe.3G292000 Prunus persica HOM05D004963 ORTHO05D006638 5.5e-119 432.6 862 33.9
TPR.G33247 Trifolium pratense HOM05D004963 ORTHO05D006638 4.7e-118 429.5 851 32.7
Thecc.04G017500 Theobroma cacao HOM05D004963 ORTHO05D006638 1.8e-117 427.6 846 33.8
Lalb_Chr06g0175731 Lupinus albus HOM05D004963 ORTHO05D006638 2.3e-117 427.2 845 33.3
Nitab4.5_0001040g0180 Nicotiana tabacum HOM05D004963 ORTHO05D006638 6.8e-117 425.6 849 33.0
COL.COLO4_29124 Corchorus olitorius HOM05D004963 ORTHO05D006638 2.0e-116 424.1 846 34.0
Haze_14742 Corylus avellana HOM05D004963 ORTHO05D006638 2.0e-116 424.1 816 34.7
Manes.17G112100 Manihot esculenta HOM05D004963 ORTHO05D006638 2.0e-116 424.1 840 33.9
Ah.03g137060 Amaranthus hybridus HOM05D004963 ORTHO05D006638 1.7e-115 421.0 840 32.6
Cfa007367 Carpinus fangiana HOM05D004963 ORTHO05D006638 2.2e-115 420.6 854 33.3
CANSAT64G0570 Cannabis sativa HOM05D004963 ORTHO05D006638 1.4e-114 417.9 847 32.5
vmacro05867 Vaccinium macrocarpon HOM05D004963 ORTHO05D006638 1.4e-114 417.9 871 33.4
CSS0016229 Camellia sinensis var. sinensis HOM05D004963 ORTHO05D006638 1.8e-114 417.5 927 32.9
MD17G1026700 Malus domestica HOM05D004963 ORTHO05D006638 1.8e-114 417.5 869 33.1
Nitab4.5_0001655g0190 Nicotiana tabacum HOM05D004963 ORTHO05D006638 2.0e-113 414.1 850 32.9
MSTRG.3144 Avicennia marina HOM05D004963 ORTHO05D006638 5.9e-113 412.5 847 32.5
Phvul.004G006800 Phaseolus vulgaris HOM05D004963 ORTHO05D006638 5.9e-113 412.5 854 33.3
Peaxi162Scf00796g00213 Petunia axillaris HOM05D004963 ORTHO05D006638 2.9e-112 410.2 845 31.8
VMungo0464G1605 Vigna mungo HOM05D004963 ORTHO05D006638 2.9e-112 410.2 855 33.2
AL7G49340 Arabidopsis lyrata HOM05D004963 ORTHO05D006638 1.5e-111 407.9 856 33.6
Migut.H00075 Erythranthe guttata HOM05D004963 ORTHO05D006638 1.9e-111 407.5 785 34.5
Sopen02g019920 Solanum pennellii HOM05D004963 ORTHO05D006638 2.5e-111 407.1 848 32.4
Glyma.05G003500 Glycine max HOM05D004963 ORTHO05D006638 3.2e-111 406.8 857 33.1
Psat1g054400 Pisum sativum HOM05D004963 ORTHO05D006638 3.2e-111 406.8 857 31.6
PGSC0003DMG400008314 Solanum tuberosum HOM05D004963 ORTHO05D006638 5.5e-111 406.0 850 32.4
Medtr6g004840 Medicago truncatula HOM05D004963 ORTHO05D006638 7.2e-111 405.6 851 32.2
Sabra16G0224100 Salix brachista HOM05D004963 ORTHO05D006638 9.5e-111 405.2 872 31.3
Solyc02g070810.4 Solanum lycopersicum HOM05D004963 ORTHO05D006638 9.5e-111 405.2 849 32.2
THA.LOC104805370 Tarenaya hassleriana HOM05D004963 ORTHO05D006638 3.6e-110 403.3 847 32.9
RcHm_v2.0_Chr2g0173101 Rosa chinensis HOM05D004963 ORTHO05D006638 1.0e-109 401.7 858 33.0
MELO3C026582.2 Cucumis melo HOM05D004963 ORTHO05D006638 2.3e-109 400.6 861 31.4
FvH4_6g51430 Fragaria vesca HOM05D004963 ORTHO05D006638 3.0e-109 400.2 857 32.7
Lj2g0007459 Lotus japonicus HOM05D004963 ORTHO05D006638 5.2e-109 399.4 856 32.0
AUR62043498 Chenopodium quinoa HOM05D004963 ORTHO05D006638 7.5e-108 395.6 837 32.1
arahy.Tifrunner.gnm1.ann1.8578L4 Arachis hypogaea HOM05D004963 ORTHO05D006638 1.3e-107 394.8 847 33.3
Carub.0007s3510 Capsella rubella HOM05D004963 ORTHO05D006638 1.3e-107 394.8 853 31.8
Ca_04160_v3 Cicer arietinum L. HOM05D004963 ORTHO05D006638 2.2e-107 394.0 860 32.0
BcaB02g07947 Brassica carinata HOM05D004963 ORTHO05D006638 3.7e-107 393.3 863 32.2
CAN.G257.2 Capsicum annuum HOM05D004963 ORTHO05D006638 3.7e-107 393.3 850 32.1
ATR0824G203 Amborella trichopoda HOM05D004963 ORTHO05D006638 8.3e-107 392.1 874 31.0
AT5G40480 Arabidopsis thaliana HOM05D004963 ORTHO05D006638 3.1e-106 390.2 838 32.7
BraA07t29729Z Brassica rapa HOM05D004963 ORTHO05D006638 3.1e-106 390.2 848 32.1
Sed0022939 Sechium edule HOM05D004963 ORTHO05D006638 5.4e-106 389.4 867 31.7
Thhalv10027618m.g Eutrema salsugineum HOM05D004963 ORTHO05D006638 9.2e-106 388.7 861 31.9
BcaC08g44458 Brassica carinata HOM05D004963 ORTHO05D006638 2.7e-105 387.1 847 31.9
BolC6t37108H Brassica oleracea HOM05D004963 ORTHO05D006638 5.9e-105 386.0 859 32.0
CARHR261510 Cardamine hirsuta HOM05D004963 ORTHO05D006638 7.7e-105 385.6 841 32.1
CsaV3_3G042810 Cucumis sativus L. HOM05D004963 ORTHO05D006638 1.7e-104 384.4 868 30.9
Rhsim10G0015700 Rhododendron simsii HOM05D004963 ORTHO05D006638 2.9e-104 383.6 879 32.0
SalBow1G1005 Salvia bowleyana HOM05D004963 ORTHO05D006638 5.0e-104 382.9 846 31.9
Nn4g22627 Nelumbo nucifera HOM05D004963 ORTHO05D006638 4.3e-103 379.8 751 34.1
A07p20280 Brassica napus HOM05D004963 ORTHO05D006638 7.3e-103 379.0 874 30.9
C06p19070 Brassica napus HOM05D004963 ORTHO05D006638 7.3e-103 379.0 874 31.0
DCAR_001439 Daucus carota HOM05D004963 ORTHO05D006638 4.7e-102 376.3 853 32.0
Aa31LG9G1130 Aethionema arabicum HOM05D004963 ORTHO05D006638 4.0e-101 373.2 878 30.9
EL10Ac6g14083 Beta vulgaris HOM05D004963 ORTHO05D006638 6.8e-101 372.5 833 31.1
Sp7g01430 Schrenkiella parvula HOM05D004963 ORTHO05D006638 2.6e-100 370.5 872 30.0
Sc03g0007420 Simmondsia chinensis HOM05D004963 ORTHO05D006638 4.1e-98 363.2 727 32.9
SGA_v2.0_scaffold18G08276 Striga asiatica HOM05D004963 ORTHO05D006638 5.4e-98 362.8 852 31.1
Cc07_g01650 Coffea canephora HOM05D004963 ORTHO05D006638 7.0e-98 362.5 856 31.2
Rhsim10G0016800 Rhododendron simsii HOM05D004963 ORTHO05D006638 9.2e-98 362.1 1051 28.5
AUR62028465 Chenopodium quinoa HOM05D004963 ORTHO05D006638 6.6e-96 355.9 833 30.9
ClCG10G013870 Citrullus lanatus HOM05D004963 ORTHO05D006638 6.6e-96 355.9 855 29.9
unitig_748.g6983 Utricularia gibba HOM05D004963 ORTHO05D006638 3.7e-91 340.1 845 29.5
Ciclev10014326m.g Citrus clementina HOM05D004963 ORTHO05D006638 7.0e-90 335.9 786 30.3
Os09g0565500 Oryza sativa ssp. japonica HOM05D004963 ORTHO05D006638 3.4e-76 290.4 651 31.8
FAN14G4225 Fragaria x ananassa HOM05D004963 ORTHO05D006638 1.7e-75 288.1 863 28.2
Hma1.2p1_0999F.1_g246170 Hydrangea macrophylla HOM05D004963 ORTHO05D006638 1.2e-70 271.9 340 44.7
SMO145G0002 Selaginella moellendorffii HOM05D004963 ORTHO05D006638 1.6e-70 271.6 865 26.8
Gohir.D09G029066 Gossypium hirsutum HOM05D004963 ORTHO05D006638 6.9e-69 266.2 348 44.5
Gorai.006G033900 Gossypium raimondii HOM05D004963 ORTHO05D006638 1.2e-68 265.4 348 44.3
CDE07G2050 Ceratophyllum demersum HOM05D004963 ORTHO05D006638 5.4e-66 256.5 270 45.6
Eucgr.J02245 Eucalyptus grandis HOM05D004963 ORTHO05D006638 7.1e-66 256.1 275 44.4
Gohir.D09G029000 Gossypium hirsutum HOM05D004963 ORTHO05D006638 3.5e-65 253.8 285 45.3
Atru.chr6.2399 Acer truncatum HOM05D004963 ORTHO05D006638 6.0e-65 253.1 290 44.8
arahy.Tifrunner.gnm1.ann1.WBLX3G Arachis hypogaea HOM05D004963 ORTHO05D006638 6.0e-65 253.1 348 44.0
Mapoly0043s0050 Marchantia polymorpha HOM05D004963 ORTHO05D006638 1.3e-64 251.9 893 25.0
Atru.chr6.2400 Acer truncatum HOM05D004963 ORTHO05D006638 4.8e-62 243.4 345 43.8
Pp3c27_1470 Physcomitrium patens HOM05D004963 ORTHO05D006638 1.0e-48 199.1 891 22.2
SEGI_28921 Sequoiadendron giganteum HOM05D004963 ORTHO05D006638 1.3e-46 192.2 306 38.6
Oeu046826.1 Olea europaea HOM05D004963 ORTHO05D006638 1.4e-45 188.7 171 51.5
Cpa.g.sc108.69 Carica papaya HOM05D004963 ORTHO05D006638 2.6e-44 184.5 271 39.5
CBR_g4853 Chara braunii HOM05D004963 ORTHO05D006638 4.9e-43 180.3 916 23.3
Carub.0007s0778 Capsella rubella HOM05D004963 ORTHO05D006638 4.6e-41 173.7 225 42.2
FvH4_3g31750 Fragaria vesca HOM05D004963 ORTHO05D006638 9.6e-39 166.0 202 47.5
FAN09G2859 Fragaria x ananassa HOM05D004963 ORTHO05D006638 6.3e-38 163.3 225 43.6
FvH4_4g00580 Fragaria vesca HOM05D004963 ORTHO05D006638 4.1e-37 160.6 202 45.5
CSS0027009 Camellia sinensis var. sinensis HOM05D004963 ORTHO05D006638 1.4e-29 135.6 295 31.9
DCAR_003836 Daucus carota HOM05D004963 ORTHO05D006638 2.4e-29 134.8 220 38.6
FAN11G1562 Fragaria x ananassa HOM05D004963 ORTHO05D006638 4.2e-26 124.0 176 43.2
CDE07G0302 Ceratophyllum demersum HOM05D004963 ORTHO05D006638 5.5e-26 123.6 155 49.0
CBR_g4854 Chara braunii HOM05D004963 ORTHO05D006638 1.2e-25 122.5 371 28.3
CDE07G1094 Ceratophyllum demersum HOM05D004963 ORTHO05D006638 2.3e-24 118.2 149 42.3
FAN02G1996 Fragaria x ananassa HOM05D004963 ORTHO05D006638 7.4e-15 86.7 140 38.6
Ciclev10018026m.g Citrus clementina HOM05D004963 ORTHO05D006638 5.3e-13 80.5 71 52.1
PGR083G1349 Punica granatum HOM05D004963 ORTHO05D006638 2.6e-12 78.2 150 32.0
SEGI_35499 Sequoiadendron giganteum HOM05D004963 ORTHO05D006638 2.9e-11 74.7 109 39.4
FvH4_1g22462 Fragaria vesca HOM05D004963 ORTHO05D006638 3.8e-11 74.3 102 47.1
Psat2g063360 Pisum sativum HOM05D004963 ORTHO05D006638 9.4e-10 69.7 73 45.2
Actinidia36871 Actinidia chinensis HOM05D004963 ORTHO05D006638 4.0e-08 64.3 78 42.3
Carub.0006s0908 Capsella rubella HOM05D004963 ORTHO05D021908 1.3e-06 59.3 142 34.5
Actinidia27518 Actinidia chinensis HOM05D001993 ORTHO05D030912 2.2e-06 58.5 167 27.5
C06p05800 Brassica napus HOM05D004963 ORTHO05D021908 2.2e-06 58.5 198 23.7


User provided reference genes

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