Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_013365 Vanilla planifolia HOM05D007421 ORTHO05D009203 3.2e-193 678.3 368 100.0
HPP92_013374 Vanilla planifolia HOM05D007421 ORTHO05D009203 4.4e-33 146.4 83 96.4
HPP92_013375 Vanilla planifolia HOM05D007421 ORTHO05D009203 8.1e-27 125.6 70 91.4
Nn5g28883 Nelumbo nucifera HOM05D007421 ORTHO05D009203 3.9e-21 106.7 301 32.9
CSS0030012 Camellia sinensis var. sinensis HOM05D007421 ORTHO05D009203 3.3e-20 103.6 255 40.0
Actinidia00249 Actinidia chinensis HOM05D007421 ORTHO05D009203 4.3e-20 103.2 272 37.9
Actinidia38971 Actinidia chinensis HOM05D003963 ORTHO05D004558 4.3e-20 103.2 269 36.1
Dinv24220 Davidia involucrata HOM05D007421 ORTHO05D009203 4.3e-20 103.2 247 36.8
CSS0048527 Camellia sinensis var. sinensis HOM05D007421 ORTHO05D009203 5.6e-20 102.8 255 39.2
Cfa005578 Carpinus fangiana HOM05D007421 ORTHO05D009203 3.7e-19 100.1 251 34.7
TAR628G0675 Trochodendron aralioides HOM05D007421 ORTHO05D009203 6.2e-19 99.4 317 32.8
Rhsim11G0134600 Rhododendron simsii HOM05D007421 ORTHO05D009203 1.1e-18 98.6 289 34.3
MBI07_g32548_MAGBIO Magnolia biondii HOM05D007421 ORTHO05D009203 1.4e-18 98.2 242 36.8
Sed0000945 Sechium edule HOM05D007421 ORTHO05D009203 2.4e-18 97.4 250 35.2
Haze_09992 Corylus avellana HOM05D003963 ORTHO05D004558 1.2e-17 95.1 192 39.6
CiPaw.06G151100 Carya illinoinensis HOM05D007421 ORTHO05D009203 1.5e-17 94.7 256 34.8
QL11p019404 Quercus lobata HOM05D007421 ORTHO05D009203 9.9e-17 92.0 260 34.6
vmacro01809 Vaccinium macrocarpon HOM05D007421 ORTHO05D009203 2.2e-16 90.9 266 33.5
COL.COLO4_20870 Corchorus olitorius HOM05D007321 ORTHO05D009244 1.1e-15 88.6 306 31.0
CsaV3_7G012710 Cucumis sativus L. HOM05D007421 ORTHO05D009203 1.9e-15 87.8 254 32.7
Aqoxy5G02013 Aquilegia oxysepala HOM05D007421 ORTHO05D009203 5.5e-15 86.3 336 31.5
Manes.11G148500 Manihot esculenta HOM05D007421 ORTHO05D009203 4.6e-14 83.2 263 32.7
Gorai.005G217800 Gossypium raimondii HOM05D007421 ORTHO05D009203 6.0e-14 82.8 262 31.7
Gohir.A03G171600 Gossypium hirsutum HOM05D007421 ORTHO05D009203 1.3e-13 81.6 262 30.5
Cc02_g21850 Coffea canephora HOM05D007421 ORTHO05D009203 1.8e-13 81.3 271 33.6
Gorai.013G063400 Gossypium raimondii HOM05D007421 ORTHO05D009203 3.9e-13 80.1 238 33.2
Ca_18335_v3 Cicer arietinum L. HOM05D007421 ORTHO05D009203 5.1e-13 79.7 243 32.1
CDE02G3538 Ceratophyllum demersum HOM05D007421 ORTHO05D009203 6.7e-13 79.3 173 35.8
DCAR_001801 Daucus carota HOM05D007421 ORTHO05D009203 1.1e-12 78.6 129 43.4
Oeu000232.1 Olea europaea HOM05D007421 ORTHO05D009203 1.1e-12 78.6 291 31.6
Gohir.A13G065600 Gossypium hirsutum HOM05D007421 ORTHO05D009203 1.9e-12 77.8 237 33.8
Psat7g097480 Pisum sativum HOM05D007421 ORTHO05D009203 1.9e-12 77.8 244 34.4
ClCG09G021300 Citrullus lanatus HOM05D007421 ORTHO05D009203 3.3e-12 77.0 261 31.4
Sc08g0004770 Simmondsia chinensis HOM05D007421 ORTHO05D009203 3.3e-12 77.0 269 32.0
EL10Ac8g19356 Beta vulgaris HOM05D007421 ORTHO05D009203 5.6e-12 76.3 211 30.8
Migut.B00638 Erythranthe guttata HOM05D007421 ORTHO05D009203 5.6e-12 76.3 158 39.2
ATR0753G155 Amborella trichopoda HOM05D007421 ORTHO05D009203 9.6e-12 75.5 126 42.9
Cpa.g.sc0.12 Carica papaya HOM05D007421 ORTHO05D009203 9.6e-12 75.5 288 28.8
Lj9C318G13 Lonicera japonica HOM05D007421 ORTHO05D009203 1.6e-11 74.7 172 34.3
Nitab4.5_0004176g0040 Nicotiana tabacum HOM05D007421 ORTHO05D009203 3.7e-11 73.6 152 36.2
Lj4g0022412 Lotus japonicus HOM05D007421 ORTHO05D009203 4.8e-11 73.2 244 32.0
Thecc.02G143500 Theobroma cacao HOM05D007421 ORTHO05D009203 6.2e-11 72.8 285 29.8
DCAR_029217 Daucus carota HOM05D007421 ORTHO05D009203 1.4e-10 71.6 250 31.2
Nitab4.5_0011639g0020 Nicotiana tabacum HOM05D007421 ORTHO05D009203 1.8e-10 71.2 267 30.0
TWI59G0537 Tripterygium wilfordii HOM05D007421 ORTHO05D009203 1.8e-10 71.2 273 32.2
Haze_10776 Corylus avellana HOM05D007421 ORTHO05D009203 3.1e-10 70.5 250 31.6
TPR.G10446 Trifolium pratense HOM05D007421 ORTHO05D009203 6.9e-10 69.3 243 29.2
Sopen10g016990 Solanum pennellii HOM05D007421 ORTHO05D009203 1.5e-09 68.2 152 36.2
Nitab4.5_0000078g0170 Nicotiana tabacum HOM05D007421 ORTHO05D009203 2.6e-09 67.4 150 38.0
SEGI_03000 Sequoiadendron giganteum HOM05D007421 ORTHO05D009203 3.4e-09 67.0 242 31.4
CAN.G1034.36 Capsicum annuum HOM05D007421 ORTHO05D009203 4.5e-09 66.6 247 30.0
Ciclev10003479m.g Citrus clementina HOM05D007421 ORTHO05D009203 5.8e-09 66.2 164 32.9
Solyc10g047040.3 Solanum lycopersicum HOM05D007421 ORTHO05D009203 1.0e-08 65.5 147 34.7
PGSC0003DMG400024171 Solanum tuberosum HOM05D007421 ORTHO05D009203 1.3e-08 65.1 123 39.0
ECA236G4083 Erigeron canadensis HOM05D007421 ORTHO05D009203 1.7e-08 64.7 209 33.0
Gohir.D13G056100 Gossypium hirsutum HOM05D007421 ORTHO05D009203 2.9e-08 63.9 203 32.0
Peaxi162Scf00003g03742 Petunia axillaris HOM05D007421 ORTHO05D009203 4.9e-08 63.2 130 36.2
Medtr4g094292 Medicago truncatula HOM05D007421 ORTHO05D009203 8.4e-08 62.4 161 34.8
SGA_v2.0_scaffold332G48944 Striga asiatica HOM05D007421 ORTHO05D009203 1.4e-07 61.6 320 29.4
Prupe.1G559900 Prunus persica HOM05D007421 ORTHO05D009203 1.9e-07 61.2 222 29.3
Sabra05G0133500 Salix brachista HOM05D007421 ORTHO05D009203 3.2e-07 60.5 302 27.5
Prupe.4G263300 Prunus persica HOM05D007421 ORTHO05D009203 4.2e-07 60.1 103 38.8
Atru.chr6.906 Acer truncatum HOM05D007421 ORTHO05D009203 5.5e-07 59.7 48 58.3
CDE10G1145 Ceratophyllum demersum HOM05D000286 ORTHO05D002905 7.1e-07 59.3 52 50.0
SMO172G0209 Selaginella moellendorffii HOM05D004073 ORTHO05D004785 9.3e-07 58.9 31 71.0
SMO198G0058 Selaginella moellendorffii HOM05D002710 ORTHO05D002905 9.3e-07 58.9 31 71.0
Cre03.g172800 Chlamydomonas reinhardtii HOM05D002710 ORTHO05D002905 1.2e-06 58.5 38 65.8
CBR_g30215 Chara braunii HOM05D002710 ORTHO05D009203 2.7e-06 57.4 68 41.2
Lalb_Chr24g0395591 Lupinus albus HOM05D014786 ORTHO05D016942 2.7e-06 57.4 124 34.7
Pp3c1_21370 Physcomitrium patens HOM05D002710 ORTHO05D002905 2.7e-06 57.4 67 46.3
Potri.005G176900 Populus trichocarpa HOM05D007421 ORTHO05D009203 3.5e-06 57.0 293 27.0
Gohir.D02G194950 Gossypium hirsutum HOM05D007421 ORTHO05D009203 4.6e-06 56.6 250 28.0
MCO11G228 Micromonas commoda HOM05D002710 ORTHO05D002905 4.6e-06 56.6 49 53.1


User provided reference genes

Program Settings