Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_013323 Vanilla planifolia HOM05D006489 ORTHO05D007556 1.2e-283 979.2 503 100.0
MBI02_g07154_MAGBIO Magnolia biondii HOM05D006489 ORTHO05D007556 1.4e-69 268.1 464 39.9
MBI18_g45561_MAGBIO Magnolia biondii HOM05D006489 ORTHO05D007556 2.9e-67 260.4 509 37.5
TAR627G0165 Trochodendron aralioides HOM05D006489 ORTHO05D007556 1.9e-66 257.7 503 37.4
Dinv22265 Davidia involucrata HOM05D006489 ORTHO05D007556 3.1e-61 240.4 491 34.0
Actinidia35341 Actinidia chinensis HOM05D006489 ORTHO05D007556 2.6e-60 237.3 507 34.9
Duzib213G0414 Durio zibethinus HOM05D006489 ORTHO05D007556 1.1e-58 231.9 504 34.7
Aqoxy1G03602 Aquilegia oxysepala HOM05D006489 ORTHO05D007556 3.2e-58 230.3 531 35.0
Ciclev10008166m.g Citrus clementina HOM05D006489 ORTHO05D007556 1.2e-57 228.4 505 34.5
COL.COLO4_19762 Corchorus olitorius HOM05D006489 ORTHO05D007556 1.6e-57 228.0 452 37.4
QL08p010454 Quercus lobata HOM05D006489 ORTHO05D007556 2.1e-57 227.6 544 32.7
Cpa.g.sc97.9 Carica papaya HOM05D006489 ORTHO05D007556 3.0e-56 223.8 505 35.2
ATR0752G219 Amborella trichopoda HOM05D006489 ORTHO05D007556 6.7e-56 222.6 446 36.5
vmacro09717 Vaccinium macrocarpon HOM05D006489 ORTHO05D007556 3.3e-55 220.3 511 32.1
Peaxi162Scf00964g00023 Petunia axillaris HOM05D006489 ORTHO05D007556 1.6e-54 218.0 514 35.4
Sabra11G0125100 Salix brachista HOM05D006489 ORTHO05D007556 2.1e-54 217.6 518 33.8
Gorai.004G027700 Gossypium raimondii HOM05D006489 ORTHO05D007556 6.2e-54 216.1 504 33.9
Gohir.D08G030200 Gossypium hirsutum HOM05D006489 ORTHO05D007556 3.1e-53 213.8 508 34.1
CSS0036232 Camellia sinensis var. sinensis HOM05D006489 ORTHO05D007556 5.3e-53 213.0 451 33.5
Hma1.2p1_1162F.1_g262610 Hydrangea macrophylla HOM05D006489 ORTHO05D007556 6.9e-53 212.6 515 34.2
CSS0017234 Camellia sinensis var. sinensis HOM05D006489 ORTHO05D007556 1.5e-52 211.5 451 33.3
Potri.011G139200 Populus trichocarpa HOM05D006489 ORTHO05D007556 2.6e-52 210.7 512 33.6
CDE05G3553 Ceratophyllum demersum HOM05D006489 ORTHO05D007556 4.9e-51 206.5 552 32.6
TWI15G0832 Tripterygium wilfordii HOM05D006489 ORTHO05D007556 8.4e-51 205.7 524 34.4
Haze_09673 Corylus avellana HOM05D006489 ORTHO05D007556 1.4e-50 204.9 561 32.3
RhsimUnG0250900 Rhododendron simsii HOM05D006489 ORTHO05D007556 5.5e-50 203.0 374 36.1
PGSC0003DMG400022321 Solanum tuberosum HOM05D006489 ORTHO05D007556 5.5e-50 203.0 511 35.0
Nn1g03547 Nelumbo nucifera HOM05D006489 ORTHO05D007556 7.1e-50 202.6 505 34.1
CDE02G1695 Ceratophyllum demersum HOM05D006489 ORTHO05D007556 9.3e-50 202.2 545 31.7
Sc03g0008610 Simmondsia chinensis HOM05D006489 ORTHO05D007556 7.9e-49 199.1 395 36.2
Lsat_1_v5_gn_9_94040 Lactuca sativa HOM05D006489 ORTHO05D007556 1.3e-48 198.4 511 34.1
CARHR096250 Cardamine hirsuta HOM05D006489 ORTHO05D007556 2.3e-48 197.6 520 34.8
HanXRQChr03g0076541 Helianthus annuus HOM05D006489 ORTHO05D007556 3.9e-48 196.8 520 34.2
Oeu062694.1 Olea europaea HOM05D006489 ORTHO05D007556 6.7e-48 196.1 497 33.2
Sopen07g032750 Solanum pennellii HOM05D006489 ORTHO05D007556 1.5e-47 194.9 512 33.6
PSO675G7358 Papaver somniferum HOM05D006489 ORTHO05D007556 1.9e-47 194.5 341 37.0
Cc09_g09720 Coffea canephora HOM05D006489 ORTHO05D007556 3.3e-47 193.7 521 32.6
Gohir.A08G019600 Gossypium hirsutum HOM05D006489 ORTHO05D007556 4.3e-47 193.4 518 32.0
CAN.G337.129 Capsicum annuum HOM05D006489 ORTHO05D007556 1.3e-46 191.8 446 34.8
Solyc07g064570.3 Solanum lycopersicum HOM05D006489 ORTHO05D007556 1.3e-46 191.8 513 33.5
TPR.G1166 Trifolium pratense HOM05D006489 ORTHO05D007556 2.8e-46 190.7 548 31.6
Carub.0003s2045 Capsella rubella HOM05D006489 ORTHO05D007556 4.8e-46 189.9 498 33.3
HanXRQChr08g0220561 Helianthus annuus HOM05D006489 ORTHO05D007556 4.1e-45 186.8 525 32.6
Aa31LG8G7280 Aethionema arabicum HOM05D006489 ORTHO05D007556 9.0e-45 185.7 514 33.7
AL3G34270 Arabidopsis lyrata HOM05D006489 ORTHO05D007556 1.2e-44 185.3 524 32.6
CiPaw.12G129400 Carya illinoinensis HOM05D006489 ORTHO05D007556 1.5e-44 184.9 573 28.4
LjContig00272g0011286 Lotus japonicus HOM05D006489 ORTHO05D007556 2.0e-44 184.5 551 31.2
AT3G20490 Arabidopsis thaliana HOM05D006489 ORTHO05D007556 2.6e-44 184.1 521 33.6
Migut.M01768 Erythranthe guttata HOM05D006489 ORTHO05D007556 2.6e-44 184.1 453 33.3
DCAR_022559 Daucus carota HOM05D006489 ORTHO05D007556 1.0e-43 182.2 529 32.9
THA.LOC104817868 Tarenaya hassleriana HOM05D006489 ORTHO05D007556 1.3e-43 181.8 501 31.7
GSVIVG01037644001 Vitis vinifera HOM05D006489 ORTHO05D007556 2.9e-43 180.6 503 31.2
ECA240G0124 Erigeron canadensis HOM05D006489 ORTHO05D007556 3.8e-43 180.3 514 32.3
Nitab4.5_0001913g0140 Nicotiana tabacum HOM05D006489 ORTHO05D007556 5.0e-43 179.9 465 32.7
Sed0018772 Sechium edule HOM05D006489 ORTHO05D007556 5.0e-43 179.9 552 31.5
Hund23251 Selenicereus undatus HOM05D006489 ORTHO05D007556 5.0e-43 179.9 461 33.8
Manes.03G129000 Manihot esculenta HOM05D006489 ORTHO05D007556 6.5e-43 179.5 523 31.2
MELO3C013233.2 Cucumis melo HOM05D006489 ORTHO05D007556 1.1e-42 178.7 548 29.7
Atru.chr2.3342 Acer truncatum HOM05D006489 ORTHO05D007556 2.5e-42 177.6 324 35.8
Nitab4.5_0011175g0010 Nicotiana tabacum HOM05D006489 ORTHO05D007556 9.4e-42 175.6 465 31.8
Ca_06317_v3 Cicer arietinum L. HOM05D006489 ORTHO05D007556 1.6e-41 174.9 565 31.0
arahy.Tifrunner.gnm1.ann1.I0Q6ZZ Arachis hypogaea HOM05D006489 ORTHO05D007556 2.7e-41 174.1 567 29.3
Cfa020351 Carpinus fangiana HOM05D006489 ORTHO05D007556 2.3e-40 171.0 592 28.7
Prupe.4G212300 Prunus persica HOM05D006489 ORTHO05D007556 3.9e-40 170.2 551 29.4
Ca_25386_v3 Cicer arietinum L. HOM05D006489 ORTHO05D007556 5.1e-40 169.9 553 30.6
Lalb_Chr17g0348451 Lupinus albus HOM05D006489 ORTHO05D007556 3.3e-39 167.2 344 33.7
arahy.Tifrunner.gnm1.ann1.X6VDEX Arachis hypogaea HOM05D006489 ORTHO05D007556 4.3e-39 166.8 564 28.2
Medtr5g092580 Medicago truncatula HOM05D006489 ORTHO05D007556 2.2e-38 164.5 374 33.4
Hma1.2p1_1162F.1_g262600 Hydrangea macrophylla HOM05D006489 ORTHO05D007556 3.7e-38 163.7 480 31.2
PSO541G0970 Papaver somniferum HOM05D006489 ORTHO05D007556 4.8e-38 163.3 503 30.0
BraA04t16706Z Brassica rapa HOM05D006489 ORTHO05D007556 1.8e-37 161.4 517 31.7
FAN25G3282 Fragaria x ananassa HOM05D006489 ORTHO05D007556 2.4e-37 161.0 445 30.3
VMungo0647G1504 Vigna mungo HOM05D006489 ORTHO05D007556 4.1e-37 160.2 594 28.8
Os04g0625100 Oryza sativa ssp. japonica HOM05D006489 ORTHO05D007556 6.9e-37 159.5 449 29.4
Zm00001eb431300 Zea mays HOM05D006489 ORTHO05D007556 2.0e-36 157.9 457 31.9
Eucgr.F00766 Eucalyptus grandis HOM05D006489 ORTHO05D007556 2.6e-36 157.5 325 33.2
SGA_v2.0_scaffold80G25948 Striga asiatica HOM05D006489 ORTHO05D007556 2.6e-36 157.5 435 31.0
Lalb_Chr10g0106941 Lupinus albus HOM05D006489 ORTHO05D007556 1.0e-35 155.6 376 32.7
Psat2g011040 Pisum sativum HOM05D006489 ORTHO05D007556 1.0e-35 155.6 561 31.2
PGR083G1541 Punica granatum HOM05D006489 ORTHO05D007556 1.3e-35 155.2 455 30.1
ClCG05G014300 Citrullus lanatus HOM05D006489 ORTHO05D007556 2.9e-35 154.1 541 29.0
Atru.BG.151.p Acer truncatum HOM05D006489 ORTHO05D007556 8.5e-35 152.5 375 30.7
Glyma.02G290600 Glycine max HOM05D006489 ORTHO05D007556 5.5e-34 149.8 595 30.1
BcaB06g27045 Brassica carinata HOM05D006489 ORTHO05D007556 9.4e-34 149.1 559 29.7
Sed0021471 Sechium edule HOM05D006489 ORTHO05D007556 9.4e-34 149.1 429 29.4
MD03G1201600 Malus domestica HOM05D006489 ORTHO05D007556 3.6e-33 147.1 563 29.5
FAN21G0022 Fragaria x ananassa HOM05D006489 ORTHO05D007556 4.7e-33 146.7 389 30.8
RcHm_v2.0_Chr5g0039401 Rosa chinensis HOM05D006489 ORTHO05D007556 4.7e-33 146.7 498 28.5
AUR62015766 Chenopodium quinoa HOM05D006489 ORTHO05D007556 6.1e-33 146.4 597 26.6
CANSAT11G2482 Cannabis sativa HOM05D006489 ORTHO05D007556 5.1e-32 143.3 576 26.7
Lj1A872T56 Lonicera japonica HOM05D006489 ORTHO05D007556 5.1e-32 143.3 329 31.9
A04p10340 Brassica napus HOM05D006489 ORTHO05D007556 1.1e-31 142.1 285 35.8
TPR.G36685 Trifolium pratense HOM05D006489 ORTHO05D007556 4.4e-31 140.2 575 28.0
Medtr6g033325 Medicago truncatula HOM05D006489 ORTHO05D007556 5.7e-31 139.8 370 32.2
C04p43850 Brassica napus HOM05D006489 ORTHO05D007556 9.7e-31 139.0 286 34.3
CsaV3_7G021220 Cucumis sativus L. HOM05D006489 ORTHO05D007556 1.7e-30 138.3 512 28.9
BcaC02g09533 Brassica carinata HOM05D006489 ORTHO05D007556 4.8e-30 136.7 286 35.0
BolC4t25966H Brassica oleracea HOM05D006489 ORTHO05D007556 4.8e-30 136.7 286 35.0
FvH4_3g22630 Fragaria vesca HOM05D006489 ORTHO05D007556 6.3e-30 136.3 440 29.3
Glyma.14G024100 Glycine max HOM05D006489 ORTHO05D007556 6.3e-30 136.3 315 33.0
Phvul.008G267300 Phaseolus vulgaris HOM05D006489 ORTHO05D007556 1.1e-29 135.6 606 26.6
Sp7g05570 Schrenkiella parvula HOM05D006489 ORTHO05D007556 9.1e-29 132.5 284 34.5
EL10Ac4g07823 Beta vulgaris HOM05D006489 ORTHO05D007556 1.3e-27 128.6 564 26.2
Psat1g097920 Pisum sativum HOM05D006489 ORTHO05D007556 6.5e-27 126.3 326 32.5
Thecc.07G037900 Theobroma cacao HOM05D006489 ORTHO05D007556 6.1e-25 119.8 386 31.9
SEGI_05401 Sequoiadendron giganteum HOM05D006489 ORTHO05D007556 9.7e-23 112.5 535 26.4
Lsat_1_v5_gn_7_108561 Lactuca sativa HOM05D006489 ORTHO05D007556 4.8e-22 110.2 214 36.9
Thhalv10028177m.g Eutrema salsugineum HOM05D006489 ORTHO05D007556 1.4e-21 108.6 437 27.5
HanXRQChr11g0337701 Helianthus annuus HOM05D006489 ORTHO05D007556 4.1e-21 107.1 170 39.4
AUR62020449 Chenopodium quinoa HOM05D006489 ORTHO05D007556 4.5e-20 103.6 559 24.3
unitig_62.g23281 Utricularia gibba HOM05D008272 ORTHO05D010429 5.9e-20 103.2 468 26.9
FAN16G1490 Fragaria x ananassa HOM05D006489 ORTHO05D007556 3.8e-19 100.5 282 32.6
ECA236G1547 Erigeron canadensis HOM05D006489 ORTHO05D007556 9.4e-18 95.9 187 32.6
Actinidia10733 Actinidia chinensis HOM05D006489 ORTHO05D007556 3.1e-13 80.9 167 35.3
Psat0s2568g0040 Pisum sativum HOM05D006489 ORTHO05D007556 6.5e-11 73.2 99 42.4
Lj8A169G92 Lonicera japonica HOM05D006489 ORTHO05D007556 1.6e-09 68.6 60 53.3


User provided reference genes

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