Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_013283 Vanilla planifolia HOM05D000623 ORTHO05D050763 2.5e-101 372.1 183 100.0
MBI19_g25012_MAGBIO Magnolia biondii HOM05D000623 ORTHO05D006801 2.8e-20 102.8 80 62.5
Sc19g0000160 Simmondsia chinensis HOM05D000623 ORTHO05D006801 8.2e-20 101.3 79 63.3
Hund09794 Selenicereus undatus HOM05D000623 ORTHO05D006801 1.4e-19 100.5 79 62.0
FvH4_7g34020 Fragaria vesca HOM05D000623 ORTHO05D006801 1.8e-19 100.1 103 53.4
CiPaw.06G033100 Carya illinoinensis HOM05D000623 ORTHO05D006801 4.0e-19 99.0 79 63.3
Nn7g37138 Nelumbo nucifera HOM05D000623 ORTHO05D006801 5.3e-19 98.6 79 58.2
RcHm_v2.0_Chr1g0384281 Rosa chinensis HOM05D000623 ORTHO05D006801 5.3e-19 98.6 103 52.4
Zm00001eb150150 Zea mays HOM05D000623 ORTHO05D006801 5.3e-19 98.6 79 60.8
FAN03G1666 Fragaria x ananassa HOM05D000623 ORTHO05D006801 9.0e-19 97.8 103 52.4
Medtr4g077920 Medicago truncatula HOM05D000623 ORTHO05D006801 1.2e-18 97.4 103 50.5
CSS0015652 Camellia sinensis var. sinensis HOM05D000623 ORTHO05D006801 1.5e-18 97.1 80 60.0
Eucgr.K00083 Eucalyptus grandis HOM05D000623 ORTHO05D006801 1.5e-18 97.1 79 63.3
Hma1.2p1_1680F.1_g297150 Hydrangea macrophylla HOM05D000623 ORTHO05D006801 1.5e-18 97.1 80 60.0
MD07G1309300 Malus domestica HOM05D000623 ORTHO05D006801 2.0e-18 96.7 79 62.0
Peaxi162Scf00516g00649 Petunia axillaris HOM05D000623 ORTHO05D006801 2.0e-18 96.7 103 52.4
TAR375G0749 Trochodendron aralioides HOM05D000623 ORTHO05D006801 2.0e-18 96.7 80 60.0
Cc02_g00260 Coffea canephora HOM05D000623 ORTHO05D006801 2.6e-18 96.3 79 60.8
Manes.09G126700 Manihot esculenta HOM05D000623 ORTHO05D006801 2.6e-18 96.3 103 49.5
Potri.019G049800 Populus trichocarpa HOM05D000623 ORTHO05D006801 2.6e-18 96.3 79 60.8
Sabra17G0072200 Salix brachista HOM05D000623 ORTHO05D006801 2.6e-18 96.3 79 60.8
Lj3A887G70 Lonicera japonica HOM05D000623 ORTHO05D006801 3.4e-18 95.9 103 50.5
Thecc.05G214300 Theobroma cacao HOM05D000623 ORTHO05D006801 3.4e-18 95.9 79 59.5
TPR.G27321 Trifolium pratense HOM05D000623 ORTHO05D006801 3.4e-18 95.9 80 60.0
Ciclev10019794m.g Citrus clementina HOM05D000623 ORTHO05D006801 4.5e-18 95.5 103 50.5
PSO339G0021 Papaver somniferum HOM05D000623 ORTHO05D006801 4.5e-18 95.5 80 58.8
Actinidia08745 Actinidia chinensis HOM05D000074 ORTHO05D006801 5.8e-18 95.1 80 58.8
Lj3g0009745 Lotus japonicus HOM05D000623 ORTHO05D006801 5.8e-18 95.1 80 58.8
PSO384G3175 Papaver somniferum HOM05D000623 ORTHO05D006801 5.8e-18 95.1 80 58.8
Glyma.11G107900 Glycine max HOM05D000623 ORTHO05D006801 7.6e-18 94.7 103 49.5
Glyma.12G017500 Glycine max HOM05D000623 ORTHO05D006801 7.6e-18 94.7 103 49.5
Actinidia34310 Actinidia chinensis HOM05D000623 ORTHO05D006801 1.0e-17 94.4 97 52.6
Nitab4.5_0000021g0630 Nicotiana tabacum HOM05D000623 ORTHO05D006801 1.0e-17 94.4 79 62.0
Prupe.2G326700 Prunus persica HOM05D000623 ORTHO05D006801 1.0e-17 94.4 79 60.8
Sed0007302 Sechium edule HOM05D000623 ORTHO05D006801 1.0e-17 94.4 103 49.5
TAR375G0083 Trochodendron aralioides HOM05D000623 ORTHO05D006801 1.0e-17 94.4 80 58.8
Cfa016037 Carpinus fangiana HOM05D000623 ORTHO05D006801 1.3e-17 94.0 79 59.5
CDE08G0653 Ceratophyllum demersum HOM05D000623 ORTHO05D006801 1.3e-17 94.0 80 53.8
CDE09G1431 Ceratophyllum demersum HOM05D000623 ORTHO05D006801 1.3e-17 94.0 80 53.8
AUR62002067 Chenopodium quinoa HOM05D000623 ORTHO05D006801 1.3e-17 94.0 79 59.5
AUR62028180 Chenopodium quinoa HOM05D000623 ORTHO05D006801 1.3e-17 94.0 79 59.5
Haze_00420 Corylus avellana HOM05D000623 ORTHO05D006801 1.3e-17 94.0 79 59.5
DCAR_020410 Daucus carota HOM05D000623 ORTHO05D006801 1.3e-17 94.0 103 49.5
Ah.13g072730 Amaranthus hybridus HOM05D000623 ORTHO05D006801 1.7e-17 93.6 103 50.5
DCAR_009018 Daucus carota HOM05D000623 ORTHO05D006801 1.7e-17 93.6 79 58.2
Lalb_Chr09g0320171 Lupinus albus HOM05D000623 ORTHO05D006801 1.7e-17 93.6 103 49.5
CANSAT21G1001 Cannabis sativa HOM05D000623 ORTHO05D006801 2.2e-17 93.2 79 59.5
Psat7g170560 Pisum sativum HOM05D000623 ORTHO05D006801 2.2e-17 93.2 103 49.5
Solyc03g097060.4 Solanum lycopersicum HOM05D000623 ORTHO05D006801 2.2e-17 93.2 103 48.5
VMungo1127G0704 Vigna mungo HOM05D000623 ORTHO05D006801 2.2e-17 93.2 80 58.8
Atru.BG.252.p Acer truncatum HOM05D000623 ORTHO05D006801 2.9e-17 92.8 79 59.5
MD01G1236700 Malus domestica HOM05D000623 ORTHO05D006801 2.9e-17 92.8 79 58.2
QL09p023747 Quercus lobata HOM05D000623 ORTHO05D006801 2.9e-17 92.8 79 59.5
GSVIVG01014123001 Vitis vinifera HOM05D000623 ORTHO05D006801 2.9e-17 92.8 80 57.5
ATR1096G091 Amborella trichopoda HOM05D000623 ORTHO05D006801 3.8e-17 92.4 79 55.7
Rhsim07G0247900 Rhododendron simsii HOM05D000623 ORTHO05D006801 3.8e-17 92.4 80 60.0
Sopen03g027800 Solanum pennellii HOM05D000623 ORTHO05D006801 4.9e-17 92.0 80 57.5
PGSC0003DMG402003156 Solanum tuberosum HOM05D000623 ORTHO05D006801 4.9e-17 92.0 80 57.5
CiPaw.05G219300 Carya illinoinensis HOM05D000623 ORTHO05D006801 6.5e-17 91.7 80 58.8
COL.COLO4_37804 Corchorus olitorius HOM05D000623 ORTHO05D006801 6.5e-17 91.7 79 59.5
Sed0018270 Sechium edule HOM05D000623 ORTHO05D006801 6.5e-17 91.7 79 58.2
EL10Ac3g05072 Beta vulgaris HOM05D000623 ORTHO05D006801 8.4e-17 91.3 79 57.0
CAN.G1131.16 Capsicum annuum HOM05D000623 ORTHO05D006801 8.4e-17 91.3 103 49.5
Ca_04914_v3 Cicer arietinum L. HOM05D000623 ORTHO05D006801 8.4e-17 91.3 80 57.5
ECA232G1729 Erigeron canadensis HOM05D002083 ORTHO05D006801 8.4e-17 91.3 79 59.5
HanXRQChr03g0088471 Helianthus annuus HOM05D000623 ORTHO05D006801 8.4e-17 91.3 79 60.8
vmacro06513 Vaccinium macrocarpon HOM05D000623 ORTHO05D006801 8.4e-17 91.3 80 60.0
ClCG02G014450 Citrullus lanatus HOM05D000623 ORTHO05D006801 1.1e-16 90.9 79 57.0
Gohir.D03G051000 Gossypium hirsutum HOM05D000623 ORTHO05D006801 1.1e-16 90.9 79 59.5
Gorai.003G052700 Gossypium raimondii HOM05D000623 ORTHO05D006801 1.1e-16 90.9 79 59.5
Dinv29156 Davidia involucrata HOM05D000623 ORTHO05D006801 1.4e-16 90.5 79 58.2
Duzib177G1063 Durio zibethinus HOM05D000623 ORTHO05D006801 1.4e-16 90.5 79 58.2
Rhsim03G0221800 Rhododendron simsii HOM05D000623 ORTHO05D006801 1.4e-16 90.5 80 58.8
Duzib128G0029 Durio zibethinus HOM05D000623 ORTHO05D006801 1.9e-16 90.1 79 57.0
Gohir.A08G221672 Gossypium hirsutum HOM05D000623 ORTHO05D006801 1.9e-16 90.1 103 47.6
Phvul.011G019900 Phaseolus vulgaris HOM05D000623 ORTHO05D006801 1.9e-16 90.1 80 56.2
SEGI_19686 Sequoiadendron giganteum HOM05D000623 ORTHO05D006801 1.9e-16 90.1 79 55.7
SGA_v2.0_scaffold18G08512 Striga asiatica HOM05D000623 ORTHO05D006801 1.9e-16 90.1 79 62.0
Gohir.D08G241900 Gossypium hirsutum HOM05D000623 ORTHO05D006801 2.5e-16 89.7 79 57.0
Gorai.004G257200 Gossypium raimondii HOM05D000623 ORTHO05D006801 2.5e-16 89.7 79 57.0
THA.LOC104827211 Tarenaya hassleriana HOM05D000623 ORTHO05D006801 3.2e-16 89.4 79 58.2
Migut.F00093 Erythranthe guttata HOM05D000623 ORTHO05D006801 4.2e-16 89.0 103 50.5
unitig_60.g25782 Utricularia gibba HOM05D000623 ORTHO05D006801 4.2e-16 89.0 79 59.5
arahy.Tifrunner.gnm1.ann1.03WG9V Arachis hypogaea HOM05D000623 ORTHO05D006801 7.1e-16 88.2 80 55.0
arahy.Tifrunner.gnm1.ann1.RS8UUT Arachis hypogaea HOM05D000623 ORTHO05D006801 7.1e-16 88.2 80 55.0
Cpa.g.sc43.87 Carica papaya HOM05D000623 ORTHO05D006801 7.1e-16 88.2 79 57.0
Lsat_1_v5_gn_9_47601 Lactuca sativa HOM05D000623 ORTHO05D006801 9.3e-16 87.8 79 58.2
SGA_v2.0_scaffold44G16894 Striga asiatica HOM05D000623 ORTHO05D006801 9.3e-16 87.8 103 50.5
THA.LOC104802924 Tarenaya hassleriana HOM05D000623 ORTHO05D006801 9.3e-16 87.8 79 57.0
Thhalv10020554m.g Eutrema salsugineum HOM05D000623 ORTHO05D006801 1.2e-15 87.4 87 54.0
SalBow4G1923 Salvia bowleyana HOM05D000623 ORTHO05D006801 1.2e-15 87.4 79 58.2
MELO3C004131.2 Cucumis melo HOM05D000623 ORTHO05D006801 1.6e-15 87.0 79 55.7
PGR142G3700 Punica granatum HOM05D000623 ORTHO05D006801 1.6e-15 87.0 79 54.4
MSTRG.26928 Avicennia marina HOM05D000623 ORTHO05D006801 2.7e-15 86.3 84 54.8
SalBow4G0865 Salvia bowleyana HOM05D000623 ORTHO05D006801 3.5e-15 85.9 103 47.6
CsaV3_2G007550 Cucumis sativus L. HOM05D000623 ORTHO05D006801 4.6e-15 85.5 79 55.7
AL6G27900 Arabidopsis lyrata HOM05D000623 ORTHO05D006801 7.9e-15 84.7 79 55.7
A10p22340 Brassica napus HOM05D000623 ORTHO05D006801 1.8e-14 83.6 79 54.4
C09p60190 Brassica napus HOM05D000623 ORTHO05D006801 1.8e-14 83.6 91 49.5
BolC9t58852H Brassica oleracea HOM05D000623 ORTHO05D006801 1.8e-14 83.6 91 49.5
BraA10t44293Z Brassica rapa HOM05D000623 ORTHO05D006801 3.0e-14 82.8 79 55.7
Carub.0006s1511 Capsella rubella HOM05D000623 ORTHO05D006801 3.0e-14 82.8 79 54.4
BcaC03g18521 Brassica carinata HOM05D000623 ORTHO05D006801 3.9e-14 82.4 79 55.7
C02p08640 Brassica napus HOM05D000106 ORTHO05D006801 3.9e-14 82.4 79 55.7
BolC2t06780H Brassica oleracea HOM05D000623 ORTHO05D006801 3.9e-14 82.4 79 55.7
BolC3t13428H Brassica oleracea HOM05D000623 ORTHO05D006801 3.9e-14 82.4 79 54.4
A02p03830 Brassica napus HOM05D000623 ORTHO05D006801 5.1e-14 82.0 91 48.4
Thhalv10013266m.g Eutrema salsugineum HOM05D000623 ORTHO05D006801 6.7e-14 81.6 79 54.4
BraA03t10132Z Brassica rapa HOM05D000623 ORTHO05D006801 1.1e-13 80.9 79 53.2
Aa31LG11G12690 Aethionema arabicum HOM05D000623 ORTHO05D006801 1.5e-13 80.5 79 54.4
BcaB01g04966 Brassica carinata HOM05D000623 ORTHO05D006801 1.5e-13 80.5 79 53.2
BraA02t05349Z Brassica rapa HOM05D000623 ORTHO05D006801 1.5e-13 80.5 79 54.4
AT5G16890 Arabidopsis thaliana HOM05D000623 ORTHO05D006801 2.5e-13 79.7 79 51.9
A03p08070 Brassica napus HOM05D000623 ORTHO05D006801 2.5e-13 79.7 79 53.2
C03p09330 Brassica napus HOM05D000623 ORTHO05D006801 2.5e-13 79.7 79 53.2
Oeu063726.1 Olea europaea HOM05D000623 ORTHO05D006801 4.3e-13 79.0 127 41.7
Sp6g27210 Schrenkiella parvula HOM05D000623 ORTHO05D006801 7.4e-13 78.2 79 53.2
BcaNung04949 Brassica carinata HOM05D000623 ORTHO05D006801 9.7e-13 77.8 79 53.2
CARHR196270 Cardamine hirsuta HOM05D000623 ORTHO05D006801 2.2e-12 76.6 79 50.6
Sabra19G0059400 Salix brachista HOM05D000623 ORTHO05D050763 6.9e-11 71.6 71 47.9
Nitab4.5_0001762g0090 Nicotiana tabacum HOM05D000623 ORTHO05D006801 1.5e-10 70.5 92 45.7
Pp3c14_19620 Physcomitrium patens HOM05D000623 ORTHO05D006801 4.5e-10 68.9 104 36.5
Rhsim13G0060400 Rhododendron simsii HOM05D001179 ORTHO05D339156 2.5e-08 63.2 54 55.6
SEGI_35165 Sequoiadendron giganteum HOM05D000623 ORTHO05D006801 1.6e-07 60.5 49 55.1
Eucgr.E04252 Eucalyptus grandis HOM05D000623 ORTHO05D005779 1.4e-06 57.4 103 35.0


User provided reference genes

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