Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_013198 Vanilla planifolia HOM05D006797 ORTHO05D007696 7.3e-54 213.8 119 100.0
TAR626G0010 Trochodendron aralioides HOM05D006797 ORTHO05D007696 9.0e-20 100.5 127 61.4
Phvul.002G187600 Phaseolus vulgaris HOM05D006797 ORTHO05D007696 3.4e-19 98.6 119 59.7
Sc24g0002860 Simmondsia chinensis HOM05D006797 ORTHO05D007696 1.7e-18 96.3 128 54.7
Glyma.05G134500 Glycine max HOM05D006797 ORTHO05D007696 3.8e-18 95.1 124 59.7
Glyma.08G089600 Glycine max HOM05D006797 ORTHO05D007696 8.5e-18 94.0 124 58.1
Ciclev10017227m.g Citrus clementina HOM05D006797 ORTHO05D007696 3.2e-17 92.0 121 56.2
TWI38G0311 Tripterygium wilfordii HOM05D006797 ORTHO05D007696 3.2e-17 92.0 129 53.5
Ah.15g091850 Amaranthus hybridus HOM05D006797 ORTHO05D007696 4.2e-17 91.7 122 58.2
Hund23985 Selenicereus undatus HOM05D006797 ORTHO05D007696 4.2e-17 91.7 99 62.6
Lalb_Chr07g0188191 Lupinus albus HOM05D006797 ORTHO05D007696 5.5e-17 91.3 115 58.3
arahy.Tifrunner.gnm1.ann1.30I9D2 Arachis hypogaea HOM05D006797 ORTHO05D007696 1.6e-16 89.7 121 57.9
arahy.Tifrunner.gnm1.ann1.3X9X11 Arachis hypogaea HOM05D006797 ORTHO05D007696 1.6e-16 89.7 121 57.9
TPR.G27392 Trifolium pratense HOM05D006797 ORTHO05D007696 2.1e-16 89.4 116 56.0
EL10Ac7g17249 Beta vulgaris HOM05D006797 ORTHO05D007696 2.7e-16 89.0 127 54.3
RcHm_v2.0_Chr5g0021541 Rosa chinensis HOM05D006797 ORTHO05D007696 2.7e-16 89.0 131 51.9
CDE05G1867 Ceratophyllum demersum HOM05D006797 ORTHO05D007696 4.6e-16 88.2 121 53.7
CSS0049260 Camellia sinensis var. sinensis HOM05D006797 ORTHO05D007696 1.0e-15 87.0 126 51.6
Nn1g05854 Nelumbo nucifera HOM05D006797 ORTHO05D007696 3.0e-15 85.5 118 57.6
GSVIVG01012170001 Vitis vinifera HOM05D006797 ORTHO05D007696 3.0e-15 85.5 134 48.5
Zm00001eb430680 Zea mays HOM05D006797 ORTHO05D007696 3.9e-15 85.1 124 50.0
Duzib211G0055 Durio zibethinus HOM05D006797 ORTHO05D007696 5.1e-15 84.7 127 53.5
Sed0011432 Sechium edule HOM05D006797 ORTHO05D007696 6.7e-15 84.3 126 55.6
Ca_18220_v3 Cicer arietinum L. HOM05D006797 ORTHO05D007696 1.1e-14 83.6 126 53.2
Medtr4g094782 Medicago truncatula HOM05D006797 ORTHO05D007696 1.1e-14 83.6 125 52.8
VMungo0251G2933 Vigna mungo HOM05D006797 ORTHO05D007696 1.5e-14 83.2 119 51.3
Zm00001eb071100 Zea mays HOM05D006797 ORTHO05D007696 1.5e-14 83.2 124 50.0
Atru.chr10.261 Acer truncatum HOM05D006797 ORTHO05D007696 2.0e-14 82.8 116 52.6
Aqoxy3G03581 Aquilegia oxysepala HOM05D006409 ORTHO05D008250 4.3e-14 81.6 131 48.1
SGA_v2.0_scaffold44G16576 Striga asiatica HOM05D001006 ORTHO05D000868 4.3e-14 81.6 123 52.8
ATR0763G022 Amborella trichopoda HOM05D006797 ORTHO05D007696 5.7e-14 81.3 108 50.9
MBI18_g20922_MAGBIO Magnolia biondii HOM05D006797 ORTHO05D007696 5.7e-14 81.3 98 57.1
Manes.03G071800 Manihot esculenta HOM05D006797 ORTHO05D007696 5.7e-14 81.3 129 51.9
Zm00001eb442340 Zea mays HOM05D006797 ORTHO05D007696 7.4e-14 80.9 96 55.2
CsaV3_6G053080 Cucumis sativus L. HOM05D006797 ORTHO05D007696 9.7e-14 80.5 130 53.1
MELO3C007002.2 Cucumis melo HOM05D006797 ORTHO05D007696 2.2e-13 79.3 132 50.0
Psat7g087040 Pisum sativum HOM05D006797 ORTHO05D007696 2.2e-13 79.3 117 51.3
Prupe.4G119300 Prunus persica HOM05D006797 ORTHO05D007696 2.2e-13 79.3 130 47.7
Cpa.g.sc30.90 Carica papaya HOM05D006797 ORTHO05D007696 2.8e-13 79.0 105 54.3
FAN16G2513 Fragaria x ananassa HOM05D006797 ORTHO05D007696 2.8e-13 79.0 128 48.4
Gorai.010G130400 Gossypium raimondii HOM05D006797 ORTHO05D007696 2.8e-13 79.0 130 48.5
Gohir.A06G110200 Gossypium hirsutum HOM05D006797 ORTHO05D007696 4.8e-13 78.2 130 47.7
Os04g0611300 Oryza sativa ssp. japonica HOM05D006797 ORTHO05D007696 4.8e-13 78.2 119 49.6
SalBow3G3973 Salvia bowleyana HOM05D006797 ORTHO05D007696 4.8e-13 78.2 121 48.8
SGA_v2.0_scaffold60G20810 Striga asiatica HOM05D006797 ORTHO05D007696 4.8e-13 78.2 123 49.6
Cc09_g04790 Coffea canephora HOM05D006797 ORTHO05D007696 6.3e-13 77.8 124 50.0
QL11p011767 Quercus lobata HOM05D006797 ORTHO05D007696 6.3e-13 77.8 128 46.1
CiPaw.10G107100 Carya illinoinensis HOM05D006797 ORTHO05D007696 8.2e-13 77.4 121 48.8
Migut.F00519 Erythranthe guttata HOM05D006797 ORTHO05D007696 1.4e-12 76.6 132 47.7
FAN21G4013 Fragaria x ananassa HOM05D006797 ORTHO05D007696 1.4e-12 76.6 128 47.7
MD10G1226000 Malus domestica HOM05D006797 ORTHO05D007696 1.4e-12 76.6 129 48.1
ClCG01G025860 Citrullus lanatus HOM05D006797 ORTHO05D007696 2.4e-12 75.9 132 50.8
Lj4g0013366 Lotus japonicus HOM05D006797 ORTHO05D007696 2.4e-12 75.9 120 50.0
FAN25G1182 Fragaria x ananassa HOM05D006797 ORTHO05D007696 3.1e-12 75.5 128 46.9
Gohir.D06G114100 Gossypium hirsutum HOM05D006797 ORTHO05D007696 3.1e-12 75.5 130 46.9
COL.COLO4_25039 Corchorus olitorius HOM05D006797 ORTHO05D007696 4.1e-12 75.1 102 52.0
Dinv03172 Davidia involucrata HOM05D006797 ORTHO05D007696 4.1e-12 75.1 132 48.5
Dinv02379 Davidia involucrata HOM05D006797 ORTHO05D007696 9.1e-12 73.9 114 50.9
FvH4_3g13200 Fragaria vesca HOM05D006797 ORTHO05D007696 9.1e-12 73.9 123 46.3
FAN11G3985 Fragaria x ananassa HOM05D006797 ORTHO05D007696 9.1e-12 73.9 123 46.3
Peaxi162Scf00036g02019 Petunia axillaris HOM05D006797 ORTHO05D007696 9.1e-12 73.9 121 51.2
MSTRG.8842 Avicennia marina HOM05D006797 ORTHO05D007696 1.2e-11 73.6 132 49.2
AUR62042807 Chenopodium quinoa HOM05D006797 ORTHO05D007696 1.2e-11 73.6 119 49.6
Hma1.2p1_1220F.1_g268030 Hydrangea macrophylla HOM05D006797 ORTHO05D007696 1.5e-11 73.2 137 47.4
HanXRQChr12g0377351 Helianthus annuus HOM05D006797 ORTHO05D007696 2.6e-11 72.4 126 46.0
PGR042G0784 Punica granatum HOM05D006797 ORTHO05D007696 1.3e-10 70.1 127 45.7
ECA248G3234 Erigeron canadensis HOM05D006797 ORTHO05D007696 1.7e-10 69.7 126 45.2
Oeu036765.2 Olea europaea HOM05D006797 ORTHO05D007696 2.2e-10 69.3 137 43.8
Rhsim13G0134800 Rhododendron simsii HOM05D006797 ORTHO05D007696 2.2e-10 69.3 135 42.2
Solyc02g082020.3 Solanum lycopersicum HOM05D006797 ORTHO05D007696 2.2e-10 69.3 129 47.3
THA.LOC104812696 Tarenaya hassleriana HOM05D006797 ORTHO05D007696 2.2e-10 69.3 130 49.2
DCAR_001265 Daucus carota HOM05D006797 ORTHO05D007696 2.9e-10 68.9 101 51.5
CAN.G809.30 Capsicum annuum HOM05D006797 ORTHO05D007696 6.5e-10 67.8 129 48.1
Lsat_1_v5_gn_3_103300 Lactuca sativa HOM05D006797 ORTHO05D007696 6.5e-10 67.8 110 49.1
Sopen02g026660 Solanum pennellii HOM05D006797 ORTHO05D007696 6.5e-10 67.8 129 48.1
PGSC0003DMG400007337 Solanum tuberosum HOM05D006797 ORTHO05D007696 6.5e-10 67.8 129 46.5
Nitab4.5_0000632g0020 Nicotiana tabacum HOM05D006797 ORTHO05D007696 8.5e-10 67.4 129 47.3
Thecc.02G002300 Theobroma cacao HOM05D006797 ORTHO05D007696 1.9e-09 66.2 64 65.6
Nitab4.5_0003902g0030 Nicotiana tabacum HOM05D006797 ORTHO05D007696 2.5e-09 65.9 129 46.5
PSO541G4265 Papaver somniferum HOM05D006797 ORTHO05D007696 2.5e-09 65.9 126 43.7
PSO675G1942 Papaver somniferum HOM05D006797 ORTHO05D007696 5.5e-09 64.7 126 42.9
unitig_37.g11921 Utricularia gibba HOM05D006797 ORTHO05D007696 5.5e-09 64.7 60 65.0
CANSAT35G2044 Cannabis sativa HOM05D006797 ORTHO05D007696 7.2e-09 64.3 114 47.4
Potri.003G155400 Populus trichocarpa HOM05D006797 ORTHO05D007696 2.1e-08 62.8 136 40.4
vmacro03563 Vaccinium macrocarpon HOM05D006797 ORTHO05D007696 6.1e-08 61.2 75 52.0
Haze_05201 Corylus avellana HOM05D000001 ORTHO05D010268 1.8e-07 59.7 46 71.7
Haze_15747 Corylus avellana HOM05D006797 ORTHO05D007696 1.8e-07 59.7 46 71.7
Aa31LG6G12300 Aethionema arabicum HOM05D006797 ORTHO05D007696 3.9e-07 58.5 126 46.0
Haze_24216 Corylus avellana HOM05D006797 ORTHO05D007696 8.8e-07 57.4 132 37.9
Pp3c24_14860 Physcomitrium patens HOM05D006797 ORTHO05D007696 8.8e-07 57.4 112 43.8
SMO167G0044 Selaginella moellendorffii HOM05D006797 ORTHO05D007696 8.8e-07 57.4 122 41.0
Sabra03G0112800 Salix brachista HOM05D006797 ORTHO05D007696 1.1e-06 57.0 47 68.1
Mapoly0051s0054 Marchantia polymorpha HOM05D006797 ORTHO05D007696 3.3e-06 55.5 59 52.5
BcaC07g37796 Brassica carinata HOM05D006797 ORTHO05D007696 7.4e-06 54.3 124 46.0
A08p10910 Brassica napus HOM05D006797 ORTHO05D007696 7.4e-06 54.3 124 46.0
BcaB04g18200 Brassica carinata HOM05D006797 ORTHO05D007696 9.7e-06 53.9 128 46.1


User provided reference genes

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