Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_013192 Vanilla planifolia HOM05D003670 ORTHO05D004767 3.5e-219 764.6 376 100.0
HPP92_013209 Vanilla planifolia HOM05D003670 ORTHO05D004767 5.0e-165 584.7 376 79.5
MBI02_g18168_MAGBIO Magnolia biondii HOM05D003670 ORTHO05D004767 2.7e-163 578.9 376 73.4
GSVIVG01036786001 Vitis vinifera HOM05D003670 ORTHO05D004767 4.7e-155 551.6 377 69.5
TAR583G0001 Trochodendron aralioides HOM05D003670 ORTHO05D004767 1.0e-154 550.4 372 71.2
ATR0763G120 Amborella trichopoda HOM05D003670 ORTHO05D004767 1.7e-152 543.1 379 69.4
PSO675G6901 Papaver somniferum HOM05D003670 ORTHO05D004767 4.9e-152 541.6 385 67.3
PSO541G1524 Papaver somniferum HOM05D003670 ORTHO05D004767 6.3e-152 541.2 383 67.1
PGR031G1669 Punica granatum HOM05D003670 ORTHO05D004767 1.4e-151 540.0 385 68.8
Migut.H01671 Erythranthe guttata HOM05D003670 ORTHO05D004767 1.8e-151 539.7 387 68.0
Manes.06G175700 Manihot esculenta HOM05D003670 ORTHO05D004767 2.4e-151 539.3 379 68.9
Gohir.A13G123400 Gossypium hirsutum HOM05D003670 ORTHO05D004767 9.1e-151 537.3 378 68.0
Gohir.D13G127300 Gossypium hirsutum HOM05D003670 ORTHO05D004767 9.1e-151 537.3 377 68.2
Aqoxy1G01484 Aquilegia oxysepala HOM05D003670 ORTHO05D004767 1.2e-150 537.0 377 67.9
Medtr2g067080 Medicago truncatula HOM05D003670 ORTHO05D004767 2.0e-150 536.2 378 67.2
Potri.007G069300 Populus trichocarpa HOM05D003670 ORTHO05D004767 2.0e-150 536.2 378 68.8
Cc05_g16310 Coffea canephora HOM05D003670 ORTHO05D004767 4.5e-150 535.0 380 68.4
Gorai.013G142500 Gossypium raimondii HOM05D003670 ORTHO05D004767 7.7e-150 534.3 378 68.0
Manes.14G010300 Manihot esculenta HOM05D003670 ORTHO05D004767 2.3e-149 532.7 377 67.9
Sopen07g034740 Solanum pennellii HOM05D003670 ORTHO05D004767 3.8e-149 531.9 377 68.2
CSS0006756 Camellia sinensis var. sinensis HOM05D003670 ORTHO05D004767 6.6e-149 531.2 380 68.7
Lj3g0014239 Lotus japonicus HOM05D003670 ORTHO05D004767 6.6e-149 531.2 378 66.1
TPR.G33813 Trifolium pratense HOM05D003670 ORTHO05D004767 6.6e-149 531.2 377 66.0
Rhsim06G0242300 Rhododendron simsii HOM05D003670 ORTHO05D004767 8.6e-149 530.8 400 64.5
Hma1.2p1_0151F.1_g067325 Hydrangea macrophylla HOM05D003670 ORTHO05D004767 1.9e-148 529.6 378 66.9
Zm00001eb031400 Zea mays HOM05D003670 ORTHO05D004767 1.9e-148 529.6 407 64.1
TWI39G0091 Tripterygium wilfordii HOM05D003670 ORTHO05D004767 3.3e-148 528.9 377 67.1
Solyc07g066580.3 Solanum lycopersicum HOM05D003670 ORTHO05D004767 4.2e-148 528.5 379 68.3
PGSC0003DMG400022232 Solanum tuberosum HOM05D003670 ORTHO05D004767 5.5e-148 528.1 376 68.4
Psat1g013760 Pisum sativum HOM05D003670 ORTHO05D004767 9.5e-148 527.3 375 65.6
ECA236G3562 Erigeron canadensis HOM05D003670 ORTHO05D004767 2.8e-147 525.8 318 76.4
Peaxi162Scf00452g00333 Petunia axillaris HOM05D003670 ORTHO05D004767 2.8e-147 525.8 376 67.3
Nitab4.5_0006241g0010 Nicotiana tabacum HOM05D003670 ORTHO05D004767 3.6e-147 525.4 376 66.8
HanXRQChr11g0335601 Helianthus annuus HOM05D003670 ORTHO05D004767 8.0e-147 524.2 318 76.4
Nitab4.5_0000029g0340 Nicotiana tabacum HOM05D003670 ORTHO05D004767 1.0e-146 523.9 311 77.2
Os12g0608600 Oryza sativa ssp. japonica HOM05D003670 ORTHO05D004767 1.0e-146 523.9 356 69.4
Lsat_1_v5_gn_7_110680 Lactuca sativa HOM05D003670 ORTHO05D004767 1.4e-146 523.5 318 76.1
Oeu002796.1 Olea europaea HOM05D003670 ORTHO05D004767 1.4e-146 523.5 333 72.4
Ca_03600_v3 Cicer arietinum L. HOM05D003670 ORTHO05D004767 1.8e-146 523.1 378 66.4
CAN.G943.51 Capsicum annuum HOM05D003670 ORTHO05D004767 4.0e-146 521.9 378 66.9
Ciclev10005196m.g Citrus clementina HOM05D003670 ORTHO05D004767 4.0e-146 521.9 378 66.9
CiPaw.11G061900 Carya illinoinensis HOM05D003670 ORTHO05D004767 5.2e-146 521.5 379 68.3
COL.COLO4_32264 Corchorus olitorius HOM05D003670 ORTHO05D004767 5.2e-146 521.5 328 73.2
Lalb_Chr25g0284691 Lupinus albus HOM05D003670 ORTHO05D004767 2.6e-145 519.2 378 65.3
Nn7g37780 Nelumbo nucifera HOM05D003670 ORTHO05D004767 2.6e-145 519.2 332 72.6
Thecc.07G180400 Theobroma cacao HOM05D003670 ORTHO05D004767 2.6e-145 519.2 388 64.7
Peaxi162Scf00006g00159 Petunia axillaris HOM05D003670 ORTHO05D004767 9.8e-145 517.3 308 76.9
Glyma.08G167100 Glycine max HOM05D003670 ORTHO05D004767 1.3e-144 516.9 381 65.1
MSTRG.14566 Avicennia marina HOM05D003670 ORTHO05D004767 2.2e-144 516.2 379 64.6
TWI38G1711 Tripterygium wilfordii HOM05D003670 ORTHO05D004767 2.2e-144 516.2 379 67.0
Nitab4.5_0005765g0040 Nicotiana tabacum HOM05D003670 ORTHO05D004767 2.9e-144 515.8 380 66.1
Phvul.005G050400 Phaseolus vulgaris HOM05D003670 ORTHO05D004767 4.9e-144 515.0 381 64.3
Sp5g34280 Schrenkiella parvula HOM05D003670 ORTHO05D004767 4.9e-144 515.0 374 65.0
MD05G1228000 Malus domestica HOM05D003670 ORTHO05D004767 6.3e-144 514.6 390 64.9
RcHm_v2.0_Chr5g0024611 Rosa chinensis HOM05D003670 ORTHO05D004767 6.3e-144 514.6 383 64.8
VMungo1080G1660 Vigna mungo HOM05D003670 ORTHO05D004767 6.3e-144 514.6 372 66.4
CANSAT80G2697 Cannabis sativa HOM05D003670 ORTHO05D004767 8.3e-144 514.2 381 65.1
Duzib187G0441 Durio zibethinus HOM05D003670 ORTHO05D004767 1.1e-143 513.8 309 75.4
QL04p088520 Quercus lobata HOM05D003670 ORTHO05D004767 1.4e-143 513.5 403 63.0
Prupe.4G134300 Prunus persica HOM05D003670 ORTHO05D004767 1.8e-143 513.1 389 65.8
Eucgr.F04458 Eucalyptus grandis HOM05D003670 ORTHO05D004767 2.4e-143 512.7 389 64.5
FvH4_3g14990 Fragaria vesca HOM05D003670 ORTHO05D004767 2.7e-142 509.2 390 65.4
Solyc02g078990.4 Solanum lycopersicum HOM05D003670 ORTHO05D004767 2.7e-142 509.2 323 72.8
FAN11G2825 Fragaria x ananassa HOM05D003670 ORTHO05D004767 4.6e-142 508.4 390 65.4
MD10G1208500 Malus domestica HOM05D003670 ORTHO05D004767 4.6e-142 508.4 387 64.6
AL2G39700 Arabidopsis lyrata HOM05D003670 ORTHO05D004767 1.0e-141 507.3 372 63.2
BcaB02g07206 Brassica carinata HOM05D003670 ORTHO05D004767 1.0e-141 507.3 368 65.2
Sed0012107 Sechium edule HOM05D003670 ORTHO05D004767 1.0e-141 507.3 387 63.8
FAN25G1710 Fragaria x ananassa HOM05D003670 ORTHO05D004767 1.3e-141 506.9 400 63.8
BcaC08g45368 Brassica carinata HOM05D003670 ORTHO05D004767 1.7e-141 506.5 305 75.1
C06p30000 Brassica napus HOM05D003670 ORTHO05D004767 1.7e-141 506.5 305 75.1
BolC6t38160H Brassica oleracea HOM05D003670 ORTHO05D004767 1.7e-141 506.5 305 75.1
CARHR016930 Cardamine hirsuta HOM05D003670 ORTHO05D004767 2.3e-141 506.1 357 67.2
Aa31LG4G1790 Aethionema arabicum HOM05D003670 ORTHO05D004767 3.9e-141 505.4 323 73.7
CsaV3_3G018980 Cucumis sativus L. HOM05D003670 ORTHO05D004767 3.9e-141 505.4 323 72.1
FAN21G1395 Fragaria x ananassa HOM05D003670 ORTHO05D004767 5.0e-141 505.0 390 65.1
Sopen02g023800 Solanum pennellii HOM05D003670 ORTHO05D004767 5.0e-141 505.0 308 75.6
Thhalv10018699m.g Eutrema salsugineum HOM05D003670 ORTHO05D004767 8.6e-141 504.2 380 64.2
vmacro11699 Vaccinium macrocarpon HOM05D003670 ORTHO05D004767 1.1e-140 503.8 360 67.8
BraA07t31943Z Brassica rapa HOM05D003670 ORTHO05D004767 2.5e-140 502.7 380 63.4
Sabra07G0056700 Salix brachista HOM05D003670 ORTHO05D004767 3.3e-140 502.3 396 63.4
Ah.10g033690 Amaranthus hybridus HOM05D003670 ORTHO05D004767 4.3e-140 501.9 399 61.7
BcaB05g25180 Brassica carinata HOM05D003670 ORTHO05D004767 7.3e-140 501.1 305 75.1
BolC5t30186H Brassica oleracea HOM05D003670 ORTHO05D004767 7.3e-140 501.1 380 63.7
CARHR072860 Cardamine hirsuta HOM05D003670 ORTHO05D004767 7.3e-140 501.1 295 75.6
EL10Ac2g03264 Beta vulgaris HOM05D003670 ORTHO05D004767 9.5e-140 500.7 321 71.3
A07p27230 Brassica napus HOM05D003670 ORTHO05D004767 9.5e-140 500.7 375 64.3
BraA07t30367Z Brassica rapa HOM05D003670 ORTHO05D004767 9.5e-140 500.7 375 64.3
Potri.005G095300 Populus trichocarpa HOM05D003670 ORTHO05D004767 1.2e-139 500.4 287 78.7
AT1G79230 Arabidopsis thaliana HOM05D003670 ORTHO05D004767 1.6e-139 500.0 372 63.7
Carub.0002s2610 Capsella rubella HOM05D003670 ORTHO05D004767 1.6e-139 500.0 361 66.5
A07p44350 Brassica napus HOM05D003670 ORTHO05D004767 4.7e-139 498.4 352 66.2
C05p14650 Brassica napus HOM05D003670 ORTHO05D004767 6.1e-139 498.0 380 63.4
BcaC05g25571 Brassica carinata HOM05D003670 ORTHO05D004767 8.0e-139 497.7 380 63.4
THA.LOC104812362 Tarenaya hassleriana HOM05D003670 ORTHO05D004767 1.0e-138 497.3 301 75.1
unitig_578.g16333 Utricularia gibba HOM05D003670 ORTHO05D004767 1.4e-138 496.9 322 70.8
Carub.0001s1620 Capsella rubella HOM05D003670 ORTHO05D004767 3.1e-138 495.7 360 65.3
AUR62039184 Chenopodium quinoa HOM05D003670 ORTHO05D004767 8.9e-138 494.2 378 63.0
AUR62037644 Chenopodium quinoa HOM05D003670 ORTHO05D004767 1.2e-137 493.8 378 62.7
Thhalv10007910m.g Eutrema salsugineum HOM05D003670 ORTHO05D004767 2.6e-137 492.7 304 73.0
BcaB02g06624 Brassica carinata HOM05D003670 ORTHO05D004767 5.8e-137 491.5 357 65.5
THA.LOC104813608 Tarenaya hassleriana HOM05D003670 ORTHO05D004767 9.8e-137 490.7 379 62.8
DCAR_019919 Daucus carota HOM05D003670 ORTHO05D004767 4.9e-136 488.4 378 64.3
BraA06t24401Z Brassica rapa HOM05D003670 ORTHO05D004767 1.9e-135 486.5 380 62.6
Oeu043724.2 Olea europaea HOM05D003670 ORTHO05D004767 2.4e-135 486.1 302 73.8
Sabra05G0078800 Salix brachista HOM05D003670 ORTHO05D004767 2.4e-135 486.1 329 70.2
A06p12380 Brassica napus HOM05D003670 ORTHO05D004767 4.6e-134 481.9 376 61.7
AL1G28600 Arabidopsis lyrata HOM05D003670 ORTHO05D004767 1.3e-133 480.3 298 73.5
Cfa022976 Carpinus fangiana HOM05D003670 ORTHO05D004767 1.5e-132 476.9 378 62.4
Sp1g14610 Schrenkiella parvula HOM05D003670 ORTHO05D004767 7.3e-132 474.6 300 71.7
SGA_v2.0_scaffold186G40197 Striga asiatica HOM05D003670 ORTHO05D004767 1.6e-131 473.4 298 68.8
AT1G16460 Arabidopsis thaliana HOM05D003670 ORTHO05D004767 4.7e-131 471.9 298 71.8
Aa31LG7G1000 Aethionema arabicum HOM05D003670 ORTHO05D004767 2.3e-130 469.5 295 71.5
SEGI_21826 Sequoiadendron giganteum HOM05D003670 ORTHO05D004767 2.3e-130 469.5 332 67.2
Hund20101 Selenicereus undatus HOM05D003670 ORTHO05D004767 4.0e-130 468.8 384 60.4
Duzib213G1009 Durio zibethinus HOM05D003670 ORTHO05D004767 8.9e-130 467.6 385 61.8
Glyma.15G260300 Glycine max HOM05D003670 ORTHO05D004767 7.5e-129 464.5 349 64.5
MSTRG.7076 Avicennia marina HOM05D003670 ORTHO05D004767 6.4e-128 461.5 316 66.8
Sc06g0002800 Simmondsia chinensis HOM05D003670 ORTHO05D004767 1.9e-127 459.9 348 65.5
arahy.Tifrunner.gnm1.ann1.36F1KB Arachis hypogaea HOM05D003670 ORTHO05D004767 1.6e-126 456.8 350 64.9
unitig_8.g4750 Utricularia gibba HOM05D003670 ORTHO05D004767 8.6e-125 451.1 373 60.3
ClCG05G009800 Citrullus lanatus HOM05D003670 ORTHO05D000003 2.5e-124 449.5 308 68.8
arahy.Tifrunner.gnm1.ann1.YZ7E83 Arachis hypogaea HOM05D003670 ORTHO05D004767 2.3e-122 443.0 350 64.3
DCAR_016837 Daucus carota HOM05D003670 ORTHO05D004767 7.6e-121 438.0 293 66.9
Os02g0167100 Oryza sativa ssp. japonica HOM05D003670 ORTHO05D004767 4.1e-119 432.2 305 63.6
C06p53140 Brassica napus HOM05D003670 ORTHO05D004767 1.6e-118 430.3 257 75.5
BolC6t40330H Brassica oleracea HOM05D003670 ORTHO05D004767 1.6e-118 430.3 257 75.5
Lj2A15G76 Lonicera japonica HOM05D003670 ORTHO05D004767 1.3e-117 427.2 347 62.5
Nitab4.5_0000388g0140 Nicotiana tabacum HOM05D003670 ORTHO05D004767 3.0e-117 426.0 326 65.0
QL04p088965 Quercus lobata HOM05D003670 ORTHO05D004767 6.2e-115 418.3 241 79.3
BcaC08g47490 Brassica carinata HOM05D003670 ORTHO05D004767 1.4e-114 417.2 353 60.3
MELO3C019489.2 Cucumis melo HOM05D003670 ORTHO05D004767 2.4e-114 416.4 327 63.0
Mapoly0058s0078 Marchantia polymorpha HOM05D003670 ORTHO05D004767 8.9e-114 414.5 299 61.5
Zm00001eb207410 Zea mays HOM05D003670 ORTHO05D004767 2.9e-112 409.5 330 58.8
AagrBONN_evm.TU.Sc2ySwM_344.5346 Anthoceros agrestis HOM05D003670 ORTHO05D004767 3.8e-112 409.1 330 59.4
SGA_v2.0_scaffold49G18190 Striga asiatica HOM05D003670 ORTHO05D004767 2.5e-108 396.4 284 68.0
Pp3c9_17670 Physcomitrium patens HOM05D003670 ORTHO05D004767 1.3e-107 394.0 315 58.1
CDE06G2006 Ceratophyllum demersum HOM05D003670 ORTHO05D004767 3.0e-101 372.9 311 61.1
Dinv19592 Davidia involucrata HOM05D003670 ORTHO05D004767 6.6e-101 371.7 282 67.7
SMO119G0061 Selaginella moellendorffii HOM05D003670 ORTHO05D004767 4.8e-99 365.5 304 56.2
Haze_07818 Corylus avellana HOM05D003670 ORTHO05D004767 6.2e-99 365.2 324 59.0
Rhsim05G0210500 Rhododendron simsii HOM05D003670 ORTHO05D004767 1.1e-92 344.4 266 63.5
CDE02G0962 Ceratophyllum demersum HOM05D003670 ORTHO05D004767 7.6e-89 331.6 224 70.5
FAN16G2550 Fragaria x ananassa HOM05D003670 ORTHO05D004767 2.3e-85 320.1 196 74.5
MD05G1228700 Malus domestica HOM05D003670 ORTHO05D004767 6.7e-85 318.5 196 74.0
Actinidia12766 Actinidia chinensis HOM05D003670 ORTHO05D004767 4.1e-82 309.3 233 66.1
Cpa.g.sc34.17 Carica papaya HOM05D003670 ORTHO05D004767 1.1e-79 301.2 209 68.9
CBR_g17038 Chara braunii HOM05D003670 ORTHO05D004767 1.2e-73 281.2 361 43.2
A02p22680 Brassica napus HOM05D003670 ORTHO05D004767 1.2e-70 271.2 366 44.0
Cre13.g607050 Chlamydomonas reinhardtii HOM05D003670 ORTHO05D004767 1.4e-69 267.7 301 45.2
MCO09G588 Micromonas commoda HOM05D003670 ORTHO05D004767 1.8e-69 267.3 302 47.4
PRCOL_00006295 Prasinoderma coloniale HOM05D003670 ORTHO05D004767 3.9e-69 266.2 310 46.5
RcHm_v2.0_Chr5g0024731 Rosa chinensis HOM05D003670 ORTHO05D004767 2.0e-65 253.8 187 65.2
C02p36310 Brassica napus HOM05D003670 ORTHO05D004767 2.6e-65 253.4 216 60.2
Aqoxy1G03000 Aquilegia oxysepala HOM05D003670 ORTHO05D004767 1.7e-48 197.6 103 85.4
Hma1.2p1_0269F.1_g107810 Hydrangea macrophylla HOM05D003670 ORTHO05D004767 2.9e-48 196.8 152 63.8
Cfa026738 Carpinus fangiana HOM05D003670 ORTHO05D004767 2.6e-44 183.7 335 36.4
BcaC04g18607 Brassica carinata HOM05D003670 ORTHO05D004767 9.8e-36 155.2 92 81.5
C03p82980 Brassica napus HOM05D003670 ORTHO05D004767 9.8e-36 155.2 94 80.9
BcaC01g00674 Brassica carinata HOM05D003670 ORTHO05D004767 2.2e-35 154.1 92 81.5
BolC1t01654H Brassica oleracea HOM05D003670 ORTHO05D004767 8.3e-35 152.1 131 61.8
CAN.G891.1 Capsicum annuum HOM05D003670 ORTHO05D004767 1.8e-34 151.0 94 77.7
C01p17180 Brassica napus HOM05D003670 ORTHO05D004767 7.0e-34 149.1 131 61.1
BolC9t58925H Brassica oleracea HOM05D003670 ORTHO05D004767 5.9e-33 146.0 131 59.5
MD05G1228600 Malus domestica HOM05D003670 ORTHO05D004767 2.3e-32 144.1 192 45.3
Oeu010650.2 Olea europaea HOM05D003670 ORTHO05D004767 3.6e-30 136.7 101 67.3
Lsat_1_v5_gn_4_93521 Lactuca sativa HOM05D003670 ORTHO05D004767 3.7e-27 126.7 66 86.4
Cpa.g.sc34.16 Carica papaya HOM05D003670 ORTHO05D004767 1.8e-26 124.4 75 72.0
Mapoly0032s0014 Marchantia polymorpha HOM05D003670 ORTHO05D031137 9.2e-26 122.1 324 27.8
Oeu034061.1 Olea europaea HOM05D003670 ORTHO05D020012 2.0e-25 120.9 74 67.6
BcaC06g34801 Brassica carinata HOM05D003670 ORTHO05D004767 2.1e-22 110.9 92 65.2
CDE06G0877 Ceratophyllum demersum HOM05D003670 ORTHO05D004767 2.8e-22 110.5 64 78.1
BolC7t42971H Brassica oleracea HOM05D003670 ORTHO05D004767 3.6e-22 110.2 133 48.1
BcaC03g15876 Brassica carinata HOM05D003670 ORTHO05D020012 7.0e-18 95.9 58 77.6
BcaC05g28269 Brassica carinata HOM05D003670 ORTHO05D014971 1.3e-16 91.7 51 82.4
Solyc06g009850.3 Solanum lycopersicum HOM05D003670 ORTHO05D014971 1.3e-16 91.7 116 50.0
AagrBONN_evm.TU.Sc2ySwM_117.2139 Anthoceros agrestis HOM05D003670 ORTHO05D031137 3.9e-16 90.1 288 28.8
BcaC02g07679 Brassica carinata HOM05D003670 ORTHO05D014971 3.4e-12 77.0 41 85.4
Sopen06g004510 Solanum pennellii HOM05D003670 ORTHO05D014971 9.8e-12 75.5 47 74.5
Solyc06g009860.1 Solanum lycopersicum HOM05D003670 ORTHO05D020012 2.4e-10 70.9 46 63.0
C06p40160 Brassica napus HOM05D003670 ORTHO05D020012 6.0e-09 66.2 44 63.6
BolC6t39098H Brassica oleracea HOM05D003670 ORTHO05D020012 6.0e-09 66.2 44 63.6
Lsat_1_v5_gn_8_160501 Lactuca sativa HOM05D003670 ORTHO05D002209 8.6e-08 62.4 33 87.9
Cre01.g008891 Chlamydomonas reinhardtii HOM05D003670 ORTHO05D031137 6.2e-06 56.2 97 34.0


User provided reference genes

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