Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_013187 Vanilla planifolia HOM05D000595 ORTHO05D001274 1.3e-76 289.7 149 100.0
HPP92_013178 Vanilla planifolia HOM05D000595 ORTHO05D001274 4.0e-65 251.5 148 87.8
HPP92_004182 Vanilla planifolia HOM05D000595 ORTHO05D001274 3.6e-34 148.7 149 52.3
HPP92_011024 Vanilla planifolia HOM05D000595 ORTHO05D001274 1.5e-27 126.7 140 52.1
Eucgr.K01952 Eucalyptus grandis HOM05D000595 ORTHO05D001274 4.3e-19 98.6 138 43.5
MBI02_g18801_MAGBIO Magnolia biondii HOM05D000595 ORTHO05D001274 5.6e-19 98.2 130 44.6
Eucgr.L00881 Eucalyptus grandis HOM05D000595 ORTHO05D001274 9.6e-19 97.4 138 42.0
Eucgr.K01962 Eucalyptus grandis HOM05D000595 ORTHO05D001274 2.1e-18 96.3 138 42.0
Eucgr.K01959 Eucalyptus grandis HOM05D000595 ORTHO05D001274 2.8e-18 95.9 138 42.8
Eucgr.K01964 Eucalyptus grandis HOM05D000595 ORTHO05D001274 1.1e-17 94.0 142 41.5
Potri.011G154200 Populus trichocarpa HOM05D000595 ORTHO05D001274 1.4e-17 93.6 145 38.6
TAR627G0932 Trochodendron aralioides HOM05D000595 ORTHO05D001274 1.4e-17 93.6 147 40.1
Eucgr.K01950 Eucalyptus grandis HOM05D000595 ORTHO05D001274 2.4e-17 92.8 138 42.0
Eucgr.L02199 Eucalyptus grandis HOM05D000595 ORTHO05D001274 4.0e-17 92.0 138 42.0
Eucgr.K01953 Eucalyptus grandis HOM05D000595 ORTHO05D001274 6.9e-17 91.3 138 42.0
Eucgr.L01888 Eucalyptus grandis HOM05D000595 ORTHO05D001274 9.0e-17 90.9 138 41.3
Eucgr.K01960 Eucalyptus grandis HOM05D000595 ORTHO05D001274 2.0e-16 89.7 134 42.5
Nn7g37727 Nelumbo nucifera HOM05D000595 ORTHO05D001274 9.9e-16 87.4 145 39.3
Lj1A1155G51 Lonicera japonica HOM05D000595 ORTHO05D001274 1.3e-15 87.0 134 41.8
PSO675G7306 Papaver somniferum HOM05D000595 ORTHO05D001274 1.3e-15 87.0 131 38.2
Eucgr.K01957 Eucalyptus grandis HOM05D000595 ORTHO05D001274 2.2e-15 86.3 135 40.0
MD05G1262300 Malus domestica HOM05D000595 ORTHO05D001274 4.9e-15 85.1 136 40.4
Eucgr.K01949 Eucalyptus grandis HOM05D000595 ORTHO05D001274 6.4e-15 84.7 134 41.0
Eucgr.K01954 Eucalyptus grandis HOM05D000595 ORTHO05D001274 1.4e-14 83.6 138 38.4
MBI02_g25681_MAGBIO Magnolia biondii HOM05D000595 ORTHO05D001274 1.9e-14 83.2 134 41.0
Eucgr.L01889 Eucalyptus grandis HOM05D000595 ORTHO05D001274 2.4e-14 82.8 119 42.9
PSO675G4743 Papaver somniferum HOM05D000595 ORTHO05D001274 2.4e-14 82.8 150 36.0
PSO541G3254 Papaver somniferum HOM05D000595 ORTHO05D001274 3.2e-14 82.4 150 36.0
Eucgr.K01956 Eucalyptus grandis HOM05D000595 ORTHO05D001274 5.4e-14 81.6 138 37.7
HanXRQChr02g0053981 Helianthus annuus HOM05D000595 ORTHO05D001274 1.6e-13 80.1 135 38.5
Aqoxy1G01550 Aquilegia oxysepala HOM05D000595 ORTHO05D001274 2.1e-13 79.7 131 38.2
Haze_05975 Corylus avellana HOM05D000595 ORTHO05D001274 2.1e-13 79.7 133 36.8
Haze_10399 Corylus avellana HOM05D000595 ORTHO05D001274 2.1e-13 79.7 133 36.8
Cfa000750 Carpinus fangiana HOM05D000595 ORTHO05D001274 3.5e-13 79.0 134 37.3
ECA232G4265 Erigeron canadensis HOM05D000595 ORTHO05D001274 3.5e-13 79.0 140 38.6
HanXRQChr02g0054001 Helianthus annuus HOM05D000595 ORTHO05D001274 4.6e-13 78.6 136 41.9
Potri.011G154300 Populus trichocarpa HOM05D000595 ORTHO05D001274 4.6e-13 78.6 144 34.7
CiPaw.09G149700 Carya illinoinensis HOM05D000595 ORTHO05D001274 6.0e-13 78.2 135 38.5
Eucgr.K01958 Eucalyptus grandis HOM05D000595 ORTHO05D001274 6.0e-13 78.2 132 39.4
SabraUnG0000300 Salix brachista HOM05D000595 ORTHO05D001274 6.0e-13 78.2 144 34.7
ClCG01G008960 Citrullus lanatus HOM05D000595 ORTHO05D001274 7.9e-13 77.8 133 39.1
Dinv26337 Davidia involucrata HOM05D000595 ORTHO05D001274 7.9e-13 77.8 137 36.5
Sabra11G0145300 Salix brachista HOM05D000595 ORTHO05D001274 7.9e-13 77.8 145 35.9
QL05p065408 Quercus lobata HOM05D000595 ORTHO05D001274 1.0e-12 77.4 80 46.2
QL05p065529 Quercus lobata HOM05D000595 ORTHO05D001274 1.3e-12 77.0 131 36.6
COL.COLO4_38454 Corchorus olitorius HOM05D000595 ORTHO05D001274 1.8e-12 76.6 148 33.8
DCAR_003816 Daucus carota HOM05D000595 ORTHO05D001274 1.8e-12 76.6 137 37.2
Lj2A338G73 Lonicera japonica HOM05D000595 ORTHO05D001274 1.8e-12 76.6 133 40.6
Potri.011G154500 Populus trichocarpa HOM05D000595 ORTHO05D001274 1.8e-12 76.6 145 33.8
TPR.G22265 Trifolium pratense HOM05D000595 ORTHO05D001274 1.8e-12 76.6 140 33.6
Lsat_1_v5_gn_4_150741 Lactuca sativa HOM05D000595 ORTHO05D001274 2.3e-12 76.3 139 36.7
Sabra16G0299400 Salix brachista HOM05D000595 ORTHO05D001274 2.3e-12 76.3 141 34.0
Sabra16G0301100 Salix brachista HOM05D000595 ORTHO05D001274 2.3e-12 76.3 141 34.0
SabraUnG0000500 Salix brachista HOM05D000595 ORTHO05D001274 2.3e-12 76.3 145 33.8
Zm00001eb273940 Zea mays HOM05D000595 ORTHO05D001274 3.0e-12 75.9 143 35.7
CiPaw.09G149600 Carya illinoinensis HOM05D000595 ORTHO05D001274 3.9e-12 75.5 138 37.0
MELO3C021782.2 Cucumis melo HOM05D000595 ORTHO05D001274 3.9e-12 75.5 133 38.3
RcHm_v2.0_Chr5g0018631 Rosa chinensis HOM05D000595 ORTHO05D001274 3.9e-12 75.5 136 38.2
vmacro03478 Vaccinium macrocarpon HOM05D000595 ORTHO05D001274 3.9e-12 75.5 129 35.7
Potri.001G442800 Populus trichocarpa HOM05D000595 ORTHO05D001274 5.1e-12 75.1 141 34.8
Cc09_g07270 Coffea canephora HOM05D000595 ORTHO05D001274 6.7e-12 74.7 132 37.1
Os06g0676700 Oryza sativa ssp. japonica HOM05D000595 ORTHO05D001274 6.7e-12 74.7 132 37.9
EL10Ac3g05408 Beta vulgaris HOM05D000595 ORTHO05D001274 1.5e-11 73.6 131 38.9
Nitab4.5_0003927g0050 Nicotiana tabacum HOM05D000595 ORTHO05D001274 1.5e-11 73.6 138 38.4
Prupe.4G103500 Prunus persica HOM05D000595 ORTHO05D001274 1.5e-11 73.6 149 37.6
CANSAT35G0362 Cannabis sativa HOM05D000595 ORTHO05D001274 1.9e-11 73.2 136 33.8
Nitab4.5_0000691g0140 Nicotiana tabacum HOM05D000595 ORTHO05D001274 1.9e-11 73.2 135 37.8
Hund04800 Selenicereus undatus HOM05D000595 ORTHO05D001274 1.9e-11 73.2 133 36.8
Ciclev10014274m.g Citrus clementina HOM05D000595 ORTHO05D001274 2.5e-11 72.8 137 35.0
FAN21G3718 Fragaria x ananassa HOM05D000595 ORTHO05D001274 2.5e-11 72.8 137 35.8
Ciclev10014196m.g Citrus clementina HOM05D000595 ORTHO05D001274 4.3e-11 72.0 137 35.0
HanXRQChr11g0324831 Helianthus annuus HOM05D000595 ORTHO05D001274 4.3e-11 72.0 129 34.9
Lsat_1_v5_gn_4_150800 Lactuca sativa HOM05D000595 ORTHO05D001274 4.3e-11 72.0 139 35.3
MD05G1262000 Malus domestica HOM05D000595 ORTHO05D001274 4.3e-11 72.0 134 36.6
PGR044G1180 Punica granatum HOM05D000595 ORTHO05D001274 4.3e-11 72.0 146 31.5
Lj2A339G42 Lonicera japonica HOM05D000595 ORTHO05D001274 5.6e-11 71.6 137 36.5
CsaV3_1G046750 Cucumis sativus L. HOM05D000595 ORTHO05D001274 7.4e-11 71.2 133 36.1
Os06g0675700 Oryza sativa ssp. japonica HOM05D000595 ORTHO05D001274 7.4e-11 71.2 131 34.4
PGSC0003DMG400016018 Solanum tuberosum HOM05D000595 ORTHO05D001274 7.4e-11 71.2 129 38.0
SGA_v2.0_scaffold298G47632 Striga asiatica HOM05D000595 ORTHO05D001274 7.4e-11 71.2 132 36.4
Actinidia33643 Actinidia chinensis HOM05D000595 ORTHO05D001274 9.6e-11 70.9 93 43.0
Lalb_Chr18g0058191 Lupinus albus HOM05D000595 ORTHO05D001274 9.6e-11 70.9 135 33.3
Lalb_Chr18g0058211 Lupinus albus HOM05D000595 ORTHO05D001274 9.6e-11 70.9 135 33.3
AUR62031439 Chenopodium quinoa HOM05D000595 ORTHO05D001274 1.3e-10 70.5 145 33.8
FvH4_3g11611 Fragaria vesca HOM05D000595 ORTHO05D001274 1.3e-10 70.5 134 35.8
TWI09G0804 Tripterygium wilfordii HOM05D000595 ORTHO05D001274 1.3e-10 70.5 133 34.6
DCAR_004308 Daucus carota HOM05D000595 ORTHO05D001274 1.6e-10 70.1 89 40.4
Sopen04g004780 Solanum pennellii HOM05D000595 ORTHO05D001274 1.6e-10 70.1 129 38.0
FAN16G2623 Fragaria x ananassa HOM05D000595 ORTHO05D001274 2.1e-10 69.7 134 35.1
Solyc04g009630.3 Solanum lycopersicum HOM05D000595 ORTHO05D001274 2.1e-10 69.7 129 37.2
TWI09G0827 Tripterygium wilfordii HOM05D000595 ORTHO05D001274 2.8e-10 69.3 148 29.7
Atru.chr10.306 Acer truncatum HOM05D000595 ORTHO05D001274 3.7e-10 68.9 134 34.3
arahy.Tifrunner.gnm1.ann1.BLZI1Z Arachis hypogaea HOM05D000595 ORTHO05D001274 3.7e-10 68.9 138 29.7
CSS0017609 Camellia sinensis var. sinensis HOM05D000595 ORTHO05D001274 3.7e-10 68.9 131 36.6
GSVIVG01037959001 Vitis vinifera HOM05D000595 ORTHO05D001274 3.7e-10 68.9 139 34.5
Oeu063148.5 Olea europaea HOM05D000595 ORTHO05D001274 4.8e-10 68.6 74 44.6
Lj6g0014997 Lotus japonicus HOM05D000595 ORTHO05D001274 6.2e-10 68.2 133 30.8
Peaxi162Scf00195g01017 Petunia axillaris HOM05D000595 ORTHO05D001274 8.1e-10 67.8 144 37.5
QL04p009616 Quercus lobata HOM05D000595 ORTHO05D001274 8.1e-10 67.8 82 41.5
Rhsim13G0126700 Rhododendron simsii HOM05D000595 ORTHO05D001274 8.1e-10 67.8 151 33.8
Actinidia04411 Actinidia chinensis HOM05D000595 ORTHO05D001274 1.1e-09 67.4 136 35.3
Ca_00886_v3 Cicer arietinum L. HOM05D000595 ORTHO05D001274 1.1e-09 67.4 75 42.7
Manes.16G062200 Manihot esculenta HOM05D000595 ORTHO05D001274 1.1e-09 67.4 88 42.0
CAN.G186.52 Capsicum annuum HOM05D000595 ORTHO05D001274 1.4e-09 67.0 133 37.6
VMungo0540G1131 Vigna mungo HOM05D000595 ORTHO05D001274 2.4e-09 66.2 149 29.5
Manes.16G061800 Manihot esculenta HOM05D000595 ORTHO05D001274 3.1e-09 65.9 134 32.8
Sed0012254 Sechium edule HOM05D000595 ORTHO05D001274 3.1e-09 65.9 132 32.6
CAN.G186.51 Capsicum annuum HOM05D000595 ORTHO05D001274 5.3e-09 65.1 81 42.0
AUR62021097 Chenopodium quinoa HOM05D000595 ORTHO05D001274 5.3e-09 65.1 129 32.6
Phvul.006G125100 Phaseolus vulgaris HOM05D000595 ORTHO05D001274 5.3e-09 65.1 140 31.4
Psat1g165040 Pisum sativum HOM05D000595 ORTHO05D001274 5.3e-09 65.1 142 29.6
SalBow8G4914 Salvia bowleyana HOM05D000595 ORTHO05D001274 5.3e-09 65.1 82 42.7
AUR62031441 Chenopodium quinoa HOM05D000595 ORTHO05D001274 6.9e-09 64.7 129 32.6
TPR.G1543 Trifolium pratense HOM05D000595 ORTHO05D001274 6.9e-09 64.7 75 42.7
AUR62021100 Chenopodium quinoa HOM05D000595 ORTHO05D001274 9.0e-09 64.3 130 33.8
Peaxi162Scf00195g01014 Petunia axillaris HOM05D000595 ORTHO05D001274 9.0e-09 64.3 144 34.0
THA.LOC104812715 Tarenaya hassleriana HOM05D000595 ORTHO05D001274 9.0e-09 64.3 140 35.0
Hma1.2p1_0016F.1_g011050 Hydrangea macrophylla HOM05D000595 ORTHO05D001274 1.2e-08 63.9 137 33.6
Nitab4.5_0002444g0050 Nicotiana tabacum HOM05D000595 ORTHO05D001274 1.2e-08 63.9 90 38.9
Oeu024450.1 Olea europaea HOM05D000595 ORTHO05D001274 1.5e-08 63.5 92 40.2
RcHm_v2.0_Chr5g0018581 Rosa chinensis HOM05D000595 ORTHO05D001274 1.5e-08 63.5 75 45.3
SalBow8G4686 Salvia bowleyana HOM05D000595 ORTHO05D001274 1.5e-08 63.5 82 41.5
Gohir.D05G111200 Gossypium hirsutum HOM05D000595 ORTHO05D001274 2.0e-08 63.2 78 42.3
Gorai.009G115500 Gossypium raimondii HOM05D000595 ORTHO05D001274 2.0e-08 63.2 78 42.3
SalBow8G2658 Salvia bowleyana HOM05D000595 ORTHO05D001274 2.0e-08 63.2 82 41.5
SalBow8G2849 Salvia bowleyana HOM05D000595 ORTHO05D001274 2.0e-08 63.2 76 40.8
SalBow8G3395 Salvia bowleyana HOM05D000595 ORTHO05D001274 2.0e-08 63.2 76 40.8
SalBow8G4899 Salvia bowleyana HOM05D000595 ORTHO05D001274 2.0e-08 63.2 82 41.5
SalBow8G5197 Salvia bowleyana HOM05D000595 ORTHO05D001274 2.0e-08 63.2 76 40.8
VMungo0540G0041 Vigna mungo HOM05D000595 ORTHO05D001274 2.0e-08 63.2 80 37.5
Gohir.A05G110800 Gossypium hirsutum HOM05D000595 ORTHO05D001274 2.6e-08 62.8 78 42.3
Nitab4.5_0011130g0010 Nicotiana tabacum HOM05D000595 ORTHO05D001274 2.6e-08 62.8 91 39.6
SalBow8G3041 Salvia bowleyana HOM05D000595 ORTHO05D001274 2.6e-08 62.8 76 40.8
Sopen02g018790 Solanum pennellii HOM05D000595 ORTHO05D001274 2.6e-08 62.8 129 31.8
TPR.G25593 Trifolium pratense HOM05D000595 ORTHO05D001274 2.6e-08 62.8 91 39.6
Aa31LG1G24210 Aethionema arabicum HOM05D000595 ORTHO05D001274 3.4e-08 62.4 136 35.3
AT5G11720 Arabidopsis thaliana HOM05D000595 ORTHO05D001274 3.4e-08 62.4 135 33.3
EL10Ac3g05394 Beta vulgaris HOM05D000595 ORTHO05D001274 3.4e-08 62.4 134 32.1
Cc09_g07290 Coffea canephora HOM05D000595 ORTHO05D001274 3.4e-08 62.4 87 37.9
COL.COLO4_26842 Corchorus olitorius HOM05D000595 ORTHO05D001274 3.4e-08 62.4 76 44.7
FvH4_3g11610 Fragaria vesca HOM05D000595 ORTHO05D001274 3.4e-08 62.4 79 44.3
EL10Ac3g05397 Beta vulgaris HOM05D000595 ORTHO05D001274 4.5e-08 62.0 136 30.9
Duzib192G0737 Durio zibethinus HOM05D000595 ORTHO05D001274 4.5e-08 62.0 75 42.7
TPR.G10999 Trifolium pratense HOM05D000595 ORTHO05D001274 4.5e-08 62.0 75 42.7
TPR.G22266 Trifolium pratense HOM05D000595 ORTHO05D001274 4.5e-08 62.0 75 42.7
Carub.0006s1022 Capsella rubella HOM05D000595 ORTHO05D001274 5.8e-08 61.6 135 33.3
Psat1g165080 Pisum sativum HOM05D000595 ORTHO05D001274 5.8e-08 61.6 132 31.1
RcHm_v2.0_Chr5g0020511 Rosa chinensis HOM05D000595 ORTHO05D001274 5.8e-08 61.6 76 43.4
Atru.chr1.3629 Acer truncatum HOM05D000595 ORTHO05D001274 7.6e-08 61.2 134 33.6
Atru.chr1.3633 Acer truncatum HOM05D000595 ORTHO05D001274 7.6e-08 61.2 134 33.6
Eucgr.K01961 Eucalyptus grandis HOM05D000595 ORTHO05D001274 7.6e-08 61.2 70 45.7
MSTRG.7565 Avicennia marina HOM05D000595 ORTHO05D001274 9.9e-08 60.8 75 44.0
EL10Ac3g05393 Beta vulgaris HOM05D000595 ORTHO05D001274 9.9e-08 60.8 132 34.1
Migut.M01937 Erythranthe guttata HOM05D000595 ORTHO05D001274 9.9e-08 60.8 92 38.0
Glyma.09G028000 Glycine max HOM05D000595 ORTHO05D001274 9.9e-08 60.8 133 28.6
Ah.13g069280 Amaranthus hybridus HOM05D000595 ORTHO05D001274 1.3e-07 60.5 143 30.1
Lj6g0018754 Lotus japonicus HOM05D000595 ORTHO05D001274 1.3e-07 60.5 140 30.0
Thecc.06G003000 Theobroma cacao HOM05D000595 ORTHO05D001274 1.3e-07 60.5 140 30.7
unitig_32.g11675 Utricularia gibba HOM05D000595 ORTHO05D001274 1.3e-07 60.5 130 33.1
ATR1098G010 Amborella trichopoda HOM05D000595 ORTHO05D001274 1.7e-07 60.1 133 36.8
RcHm_v2.0_Chr5g0018571 Rosa chinensis HOM05D000595 ORTHO05D001274 1.7e-07 60.1 76 43.4
arahy.Tifrunner.gnm1.ann1.XV6HX4 Arachis hypogaea HOM05D000595 ORTHO05D001274 2.2e-07 59.7 133 27.8
arahy.Tifrunner.gnm1.ann1.1PFK72 Arachis hypogaea HOM05D000595 ORTHO05D001274 2.9e-07 59.3 133 28.6
A03p05130 Brassica napus HOM05D000595 ORTHO05D001274 2.9e-07 59.3 137 31.4
BraA03t09851Z Brassica rapa HOM05D000595 ORTHO05D001274 2.9e-07 59.3 137 31.4
Thhalv10012616m.g Eutrema salsugineum HOM05D000595 ORTHO05D001274 2.9e-07 59.3 135 34.1
Ah.07g206440 Amaranthus hybridus HOM05D000595 ORTHO05D001274 3.8e-07 58.9 132 27.3
arahy.Tifrunner.gnm1.ann1.EJS23T Arachis hypogaea HOM05D000595 ORTHO05D001274 3.8e-07 58.9 133 29.3
C03p05920 Brassica napus HOM05D000595 ORTHO05D001274 3.8e-07 58.9 137 31.4
BolC3t13104H Brassica oleracea HOM05D000595 ORTHO05D001274 3.8e-07 58.9 137 31.4
AL6G22450 Arabidopsis lyrata HOM05D000595 ORTHO05D001274 6.4e-07 58.2 135 31.1
CARHR201500 Cardamine hirsuta HOM05D000595 ORTHO05D001274 6.4e-07 58.2 76 44.7
arahy.Tifrunner.gnm1.ann1.VF88UG Arachis hypogaea HOM05D000595 ORTHO05D001274 8.4e-07 57.8 133 28.6
Sp6g31890 Schrenkiella parvula HOM05D000595 ORTHO05D001274 8.4e-07 57.8 137 31.4
Solyc02g069670.4 Solanum lycopersicum HOM05D000595 ORTHO05D001274 1.1e-06 57.4 117 31.6
Ciclev10017610m.g Citrus clementina HOM05D000595 ORTHO05D001274 1.4e-06 57.0 80 33.8
unitig_748.g7352 Utricularia gibba HOM05D000595 ORTHO05D001274 1.4e-06 57.0 75 41.3
Glyma.15G133600 Glycine max HOM05D000595 ORTHO05D001274 2.4e-06 56.2 75 33.3
Glyma.15G133700 Glycine max HOM05D000595 ORTHO05D001274 7.1e-06 54.7 144 25.7


User provided reference genes

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