Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_013166 Vanilla planifolia HOM05D000921 ORTHO05D004782 3.9e-102 374.8 186 100.0
HPP92_013162 Vanilla planifolia HOM05D000921 ORTHO05D004782 6.0e-79 297.7 174 85.6
MBI16_g31258_MAGBIO Magnolia biondii HOM05D000921 ORTHO05D004782 1.7e-60 236.5 173 66.5
Sed0023880 Sechium edule HOM05D000921 ORTHO05D004782 2.2e-60 236.1 144 73.6
MELO3C003512.2 Cucumis melo HOM05D000921 ORTHO05D004782 2.8e-60 235.7 173 64.2
CsaV3_3G048070 Cucumis sativus L. HOM05D000921 ORTHO05D004782 2.8e-60 235.7 173 64.2
Aqoxy6G00846 Aquilegia oxysepala HOM05D000921 ORTHO05D004782 4.8e-60 235.0 173 64.7
Eucgr.F00430 Eucalyptus grandis HOM05D000921 ORTHO05D004782 4.8e-60 235.0 174 63.8
Zm00001eb207540 Zea mays HOM05D000921 ORTHO05D004782 6.3e-60 234.6 171 67.3
ClCG11G014670 Citrullus lanatus HOM05D000921 ORTHO05D004782 8.2e-60 234.2 173 63.6
FvH4_5g34530 Fragaria vesca HOM05D000921 ORTHO05D004782 8.2e-60 234.2 173 64.7
FAN08G1747 Fragaria x ananassa HOM05D000921 ORTHO05D004782 8.2e-60 234.2 173 64.7
CANSAT54G2772 Cannabis sativa HOM05D000921 ORTHO05D004782 1.1e-59 233.8 173 64.2
TAR381G0975 Trochodendron aralioides HOM05D000921 ORTHO05D004782 1.1e-59 233.8 173 65.3
FAN18G1361 Fragaria x ananassa HOM05D000921 ORTHO05D004782 1.4e-59 233.4 173 64.7
Aqoxy2G01334 Aquilegia oxysepala HOM05D000921 ORTHO05D004782 1.8e-59 233.0 173 64.2
FAN13G0958 Fragaria x ananassa HOM05D000921 ORTHO05D004782 1.8e-59 233.0 173 64.7
COL.COLO4_35265 Corchorus olitorius HOM05D000921 ORTHO05D004782 2.4e-59 232.6 174 64.4
RcHm_v2.0_Chr7g0235181 Rosa chinensis HOM05D000921 ORTHO05D004782 3.1e-59 232.3 173 64.2
TWI56G0737 Tripterygium wilfordii HOM05D000921 ORTHO05D004782 3.1e-59 232.3 145 69.0
PGR042G3444 Punica granatum HOM05D000921 ORTHO05D004782 5.3e-59 231.5 173 64.7
QL09p018095 Quercus lobata HOM05D000921 ORTHO05D004782 5.3e-59 231.5 181 61.9
Cpa.g.sc21.34 Carica papaya HOM05D000921 ORTHO05D004782 6.9e-59 231.1 173 61.8
MD15G1387600 Malus domestica HOM05D000921 ORTHO05D004782 6.9e-59 231.1 173 64.2
Manes.18G056822 Manihot esculenta HOM05D000921 ORTHO05D004782 6.9e-59 231.1 144 73.6
Nn5g29852 Nelumbo nucifera HOM05D000921 ORTHO05D004782 2.0e-58 229.6 173 64.2
HanXRQChr05g0163481 Helianthus annuus HOM05D000921 ORTHO05D004782 3.4e-58 228.8 169 65.7
vmacro21345 Vaccinium macrocarpon HOM05D000921 ORTHO05D004782 3.4e-58 228.8 143 72.0
Haze_22475 Corylus avellana HOM05D000921 ORTHO05D004782 5.9e-58 228.0 168 63.1
ECA246G1489 Erigeron canadensis HOM05D000921 ORTHO05D004782 5.9e-58 228.0 172 63.4
Prupe.1G534000 Prunus persica HOM05D000921 ORTHO05D004782 5.9e-58 228.0 173 62.4
Rhsim06G0071200 Rhododendron simsii HOM05D000921 ORTHO05D004782 5.9e-58 228.0 143 70.6
CSS0003023 Camellia sinensis var. sinensis HOM05D000921 ORTHO05D004782 7.7e-58 227.6 143 73.4
DCAR_012852 Daucus carota HOM05D000921 ORTHO05D004782 7.7e-58 227.6 168 66.1
CiPaw.07G164000 Carya illinoinensis HOM05D000921 ORTHO05D004782 1.0e-57 227.3 168 64.3
Ciclev10000002m.g Citrus clementina HOM05D000921 ORTHO05D004782 1.0e-57 227.3 174 63.2
Peaxi162Scf00454g00118 Petunia axillaris HOM05D000921 ORTHO05D004782 1.3e-57 226.9 173 63.0
Phvul.009G035500 Phaseolus vulgaris HOM05D000921 ORTHO05D004782 1.7e-57 226.5 173 61.8
Thecc.08G072600 Theobroma cacao HOM05D000921 ORTHO05D004782 1.7e-57 226.5 174 62.1
AUR62014358 Chenopodium quinoa HOM05D000921 ORTHO05D004782 2.9e-57 225.7 144 72.9
Lj4C739G4 Lonicera japonica HOM05D000921 ORTHO05D004782 2.9e-57 225.7 168 66.7
MD08G1200600 Malus domestica HOM05D000921 ORTHO05D004782 2.9e-57 225.7 173 62.4
AUR62019100 Chenopodium quinoa HOM05D000921 ORTHO05D004782 3.8e-57 225.3 144 72.2
TPR.G6323 Trifolium pratense HOM05D000921 ORTHO05D004782 3.8e-57 225.3 172 62.2
Duzib116G0480 Durio zibethinus HOM05D000921 ORTHO05D004782 6.5e-57 224.6 174 62.6
Nitab4.5_0000131g0090 Nicotiana tabacum HOM05D000921 ORTHO05D004782 6.5e-57 224.6 173 62.4
Solyc04g076510.3 Solanum lycopersicum HOM05D000921 ORTHO05D004782 6.5e-57 224.6 173 63.0
Atru.chr13.992 Acer truncatum HOM05D000921 ORTHO05D004782 8.5e-57 224.2 187 59.4
Cc10_g08460 Coffea canephora HOM05D000921 ORTHO05D004782 8.5e-57 224.2 173 64.2
Lsat_1_v5_gn_6_107401 Lactuca sativa HOM05D000921 ORTHO05D004782 1.1e-56 223.8 183 60.1
Lj1g0023313 Lotus japonicus HOM05D000921 ORTHO05D004782 1.4e-56 223.4 173 61.8
Medtr3g100060 Medicago truncatula HOM05D000921 ORTHO05D004782 1.9e-56 223.0 173 63.0
Sopen04g030240 Solanum pennellii HOM05D000921 ORTHO05D004782 1.9e-56 223.0 173 62.4
Os06g0678650 Oryza sativa ssp. japonica HOM05D000921 ORTHO05D004782 2.5e-56 222.6 166 63.9
Ah.05g171400 Amaranthus hybridus HOM05D000921 ORTHO05D004782 3.2e-56 222.2 173 60.7
Lalb_Chr23g0270001 Lupinus albus HOM05D000921 ORTHO05D004782 3.2e-56 222.2 173 61.3
Zm00001eb273770 Zea mays HOM05D000921 ORTHO05D004782 3.2e-56 222.2 171 63.7
Glyma.06G097800 Glycine max HOM05D000921 ORTHO05D004782 4.2e-56 221.9 173 61.3
Potri.002G111000 Populus trichocarpa HOM05D000921 ORTHO05D004782 4.2e-56 221.9 168 64.3
EL10Ac1g00502 Beta vulgaris HOM05D000921 ORTHO05D004782 5.5e-56 221.5 173 61.3
DCAR_019322 Daucus carota HOM05D000921 ORTHO05D004782 7.2e-56 221.1 139 72.7
Ca_16011_v3 Cicer arietinum L. HOM05D000921 ORTHO05D004782 1.2e-55 220.3 173 61.3
CAN.G475.8 Capsicum annuum HOM05D000921 ORTHO05D004782 2.1e-55 219.5 173 61.8
Gohir.D06G030700 Gossypium hirsutum HOM05D000921 ORTHO05D004782 3.6e-55 218.8 168 62.5
Gorai.010G033700 Gossypium raimondii HOM05D000921 ORTHO05D004782 3.6e-55 218.8 168 62.5
Glyma.04G096100 Glycine max HOM05D000921 ORTHO05D004782 4.7e-55 218.4 173 61.3
Sabra02G0087500 Salix brachista HOM05D000921 ORTHO05D004782 4.7e-55 218.4 168 63.7
Thhalv10023210m.g Eutrema salsugineum HOM05D000921 ORTHO05D004782 6.1e-55 218.0 174 59.8
SGA_v2.0_scaffold28G11888 Striga asiatica HOM05D000921 ORTHO05D004782 6.1e-55 218.0 167 64.7
ATR0767G173 Amborella trichopoda HOM05D000921 ORTHO05D004782 1.4e-54 216.9 173 59.5
AL2G18210 Arabidopsis lyrata HOM05D000921 ORTHO05D004782 2.3e-54 216.1 168 61.3
SalBow2G2227 Salvia bowleyana HOM05D000921 ORTHO05D004782 2.3e-54 216.1 173 59.5
Sp2g05370 Schrenkiella parvula HOM05D000921 ORTHO05D004782 2.3e-54 216.1 174 59.2
arahy.Tifrunner.gnm1.ann1.YNEA8K Arachis hypogaea HOM05D000921 ORTHO05D004782 3.0e-54 215.7 145 67.6
A01p28340 Brassica napus HOM05D000921 ORTHO05D004782 3.0e-54 215.7 174 59.2
BraA01t02962Z Brassica rapa HOM05D000921 ORTHO05D004782 3.0e-54 215.7 174 59.2
Gorai.005G097000 Gossypium raimondii HOM05D000921 ORTHO05D004782 3.0e-54 215.7 166 63.9
Gohir.D02G086100 Gossypium hirsutum HOM05D000921 ORTHO05D004782 3.9e-54 215.3 166 63.9
Aa31LG2G10910 Aethionema arabicum HOM05D000921 ORTHO05D004782 5.1e-54 214.9 168 60.7
Carub.0002s0634 Capsella rubella HOM05D000921 ORTHO05D004782 5.1e-54 214.9 171 60.2
THA.LOC104816792 Tarenaya hassleriana HOM05D000921 ORTHO05D004782 5.1e-54 214.9 168 60.1
AT1G58230 Arabidopsis thaliana HOM05D000921 ORTHO05D004782 6.7e-54 214.5 168 60.7
Gohir.A02G078900 Gossypium hirsutum HOM05D000921 ORTHO05D004782 6.7e-54 214.5 166 62.7
C01p35890 Brassica napus HOM05D000921 ORTHO05D004782 8.8e-54 214.2 174 58.6
BolC1t03548H Brassica oleracea HOM05D000921 ORTHO05D004782 8.8e-54 214.2 174 58.6
CARHR053750 Cardamine hirsuta HOM05D000921 ORTHO05D004782 1.1e-53 213.8 168 60.1
MSTRG.24432 Avicennia marina HOM05D000921 ORTHO05D004782 7.4e-53 211.1 182 56.6
Migut.N02862 Erythranthe guttata HOM05D000921 ORTHO05D004782 1.7e-52 209.9 167 59.9
SEGI_08305 Sequoiadendron giganteum HOM05D000921 ORTHO05D004782 7.0e-51 204.5 139 64.0
Actinidia19246 Actinidia chinensis HOM05D000921 ORTHO05D004782 3.5e-50 202.2 123 75.6
unitig_578.g16055 Utricularia gibba HOM05D000921 ORTHO05D004782 1.9e-48 196.4 159 59.1
Psat5g049440 Pisum sativum HOM05D000921 ORTHO05D004782 3.6e-47 192.2 118 75.4
Mapoly0001s0542 Marchantia polymorpha HOM05D000921 ORTHO05D004782 8.2e-44 181.0 141 57.4
AagrBONN_evm.TU.Sc2ySwM_117.180 Anthoceros agrestis HOM05D000921 ORTHO05D004782 1.2e-42 177.2 140 52.1
Pp3c20_23460 Physcomitrium patens HOM05D000921 ORTHO05D004782 3.8e-41 172.2 168 48.8
SMO169G0086 Selaginella moellendorffii HOM05D000921 ORTHO05D004782 1.8e-38 163.3 159 46.5
CBR_g9085 Chara braunii HOM05D000921 ORTHO05D004782 6.3e-36 154.8 164 42.7
PRCOL_00007064 Prasinoderma coloniale HOM05D000921 ORTHO05D004782 1.5e-16 90.5 140 33.6
MCO16G650 Micromonas commoda HOM05D000921 ORTHO05D004782 8.9e-14 81.3 142 33.8
Nn5g29847 Nelumbo nucifera HOM05D000921 ORTHO05D004782 1.1e-11 74.3 54 64.8
Lsat_1_v5_gn_8_34341 Lactuca sativa HOM05D000921 ORTHO05D004782 2.1e-07 60.1 35 74.3
BcaC02g10197 Brassica carinata HOM05D000921 ORTHO05D002852 6.2e-07 58.5 123 30.9
Migut.F01430 Erythranthe guttata HOM05D000921 ORTHO05D002852 1.1e-06 57.8 121 31.4
Os04g0555500 Oryza sativa ssp. japonica HOM05D000921 ORTHO05D002852 1.4e-06 57.4 109 30.3
Sc26g0001150 Simmondsia chinensis HOM05D000921 ORTHO05D002852 1.4e-06 57.4 185 27.0
C04p31670 Brassica napus HOM05D000921 ORTHO05D002852 1.8e-06 57.0 110 30.9
BolC4t24715H Brassica oleracea HOM05D000921 ORTHO05D002852 1.8e-06 57.0 110 30.9
Zm00001eb074430 Zea mays HOM05D000921 ORTHO05D002852 1.8e-06 57.0 109 29.4
SEGI_07876 Sequoiadendron giganteum HOM05D000921 ORTHO05D002852 2.3e-06 56.6 107 30.8
Zm00001eb249850 Zea mays HOM05D000921 ORTHO05D002852 2.3e-06 56.6 109 29.4


User provided reference genes

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