Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_013154 Vanilla planifolia HOM05D000921 ORTHO05D004782 0.0e+00 2090.5 1054 100.0
TAR381G0975 Trochodendron aralioides HOM05D000921 ORTHO05D004782 1.3e-306 1056.6 1112 52.5
Nn5g29852 Nelumbo nucifera HOM05D000921 ORTHO05D004782 1.6e-298 1029.6 1106 52.0
CiPaw.07G164000 Carya illinoinensis HOM05D000921 ORTHO05D004782 1.2e-288 996.9 1111 49.7
Actinidia19246 Actinidia chinensis HOM05D000921 ORTHO05D004782 2.6e-288 995.7 1112 49.8
Thecc.08G072600 Theobroma cacao HOM05D000921 ORTHO05D004782 8.5e-287 990.7 1109 49.6
Aqoxy6G00846 Aquilegia oxysepala HOM05D000921 ORTHO05D004782 7.2e-286 987.6 1113 50.0
Zm00001eb207540 Zea mays HOM05D000921 ORTHO05D004782 1.6e-285 986.5 1105 49.7
Atru.chr13.992 Acer truncatum HOM05D000921 ORTHO05D004782 1.5e-283 979.9 1113 48.4
GSVIVG01009194001 Vitis vinifera HOM05D000921 ORTHO05D004782 4.4e-283 978.4 1130 49.5
QL09p018095 Quercus lobata HOM05D000921 ORTHO05D004782 2.2e-282 976.1 1108 48.8
Prupe.1G534000 Prunus persica HOM05D000921 ORTHO05D004782 3.7e-282 975.3 1106 49.5
Ciclev10000002m.g Citrus clementina HOM05D000921 ORTHO05D004782 5.3e-281 971.5 1114 48.6
Potri.002G111000 Populus trichocarpa HOM05D000921 ORTHO05D004782 4.5e-280 968.4 1108 49.0
MD15G1387600 Malus domestica HOM05D000921 ORTHO05D004782 3.8e-279 965.3 1110 49.3
Glyma.06G097800 Glycine max HOM05D000921 ORTHO05D004782 6.5e-279 964.5 1108 48.6
TWI56G0737 Tripterygium wilfordii HOM05D000921 ORTHO05D004782 1.4e-276 956.8 1113 48.9
CANSAT54G2772 Cannabis sativa HOM05D000921 ORTHO05D004782 6.7e-276 954.5 1111 47.9
Lj1g0023313 Lotus japonicus HOM05D000921 ORTHO05D004782 1.1e-275 953.7 1115 48.4
Dinv42602 Davidia involucrata HOM05D000921 ORTHO05D004782 9.7e-275 950.7 1111 48.3
Glyma.04G096100 Glycine max HOM05D000921 ORTHO05D004782 6.3e-274 948.0 1117 47.9
Gorai.005G097000 Gossypium raimondii HOM05D000921 ORTHO05D004782 1.6e-272 943.3 1105 48.1
Manes.18G056822 Manihot esculenta HOM05D000921 ORTHO05D004782 3.5e-272 942.2 1100 49.1
Gohir.D02G086100 Gossypium hirsutum HOM05D000921 ORTHO05D004782 3.8e-271 938.7 1102 47.7
Medtr3g100060 Medicago truncatula HOM05D000921 ORTHO05D004782 1.1e-270 937.2 1112 48.0
Eucgr.F00430 Eucalyptus grandis HOM05D000921 ORTHO05D004782 2.5e-270 936.0 1107 47.5
PGR042G3444 Punica granatum HOM05D000921 ORTHO05D004782 2.5e-270 936.0 1108 47.2
Phvul.009G035500 Phaseolus vulgaris HOM05D000921 ORTHO05D004782 1.0e-268 930.6 1108 47.3
Ca_16011_v3 Cicer arietinum L. HOM05D000921 ORTHO05D004782 1.2e-267 927.2 1126 47.1
Psat5g049440 Pisum sativum HOM05D000921 ORTHO05D004782 2.0e-264 916.4 1105 47.4
Sabra02G0087600 Salix brachista HOM05D000921 ORTHO05D004782 2.7e-264 916.0 1138 46.5
MELO3C003512.2 Cucumis melo HOM05D000921 ORTHO05D004782 4.5e-264 915.2 1100 46.3
Lalb_Chr23g0270001 Lupinus albus HOM05D000921 ORTHO05D004782 2.2e-263 912.9 1102 47.4
TPR.G6323 Trifolium pratense HOM05D000921 ORTHO05D004782 2.2e-263 912.9 1102 46.4
CAN.G475.8 Capsicum annuum HOM05D000921 ORTHO05D004782 5.0e-263 911.8 1106 47.7
Sopen04g030240 Solanum pennellii HOM05D000921 ORTHO05D004782 5.0e-263 911.8 1115 47.4
HanXRQChr05g0163481 Helianthus annuus HOM05D000921 ORTHO05D004782 2.5e-262 909.4 1089 46.8
COL.COLO4_35265 Corchorus olitorius HOM05D000921 ORTHO05D004782 3.2e-262 909.1 1218 44.7
arahy.Tifrunner.gnm1.ann1.YNEA8K Arachis hypogaea HOM05D000921 ORTHO05D004782 2.1e-261 906.4 1162 45.4
Haze_22475 Corylus avellana HOM05D000921 ORTHO05D004782 2.7e-261 906.0 1108 47.2
FvH4_5g34530 Fragaria vesca HOM05D000921 ORTHO05D004782 7.7e-256 887.9 1105 45.8
RcHm_v2.0_Chr7g0235181 Rosa chinensis HOM05D000921 ORTHO05D004782 1.7e-255 886.7 1114 45.8
Lsat_1_v5_gn_6_107401 Lactuca sativa HOM05D000921 ORTHO05D004782 1.9e-254 883.2 1102 44.8
Duzib116G0480 Durio zibethinus HOM05D000921 ORTHO05D004782 2.5e-254 882.9 1113 46.3
Migut.N02862 Erythranthe guttata HOM05D000921 ORTHO05D004782 4.2e-254 882.1 1103 44.5
SGA_v2.0_scaffold28G11888 Striga asiatica HOM05D000921 ORTHO05D004782 4.0e-252 875.5 1107 45.1
Nitab4.5_0002391g0010 Nicotiana tabacum HOM05D000921 ORTHO05D004782 2.8e-250 869.4 1127 46.3
MSTRG.24432 Avicennia marina HOM05D000921 ORTHO05D004782 1.4e-249 867.1 1105 44.3
Nitab4.5_0000131g0100 Nicotiana tabacum HOM05D000921 ORTHO05D004782 4.1e-249 865.5 1117 45.9
ATR0767G173 Amborella trichopoda HOM05D000921 ORTHO05D004782 1.2e-248 864.0 1086 45.8
FAN13G0958 Fragaria x ananassa HOM05D000921 ORTHO05D004782 9.5e-246 854.4 1106 44.3
FAN18G1361 Fragaria x ananassa HOM05D000921 ORTHO05D004782 2.1e-245 853.2 1119 44.0
Rhsim06G0071200 Rhododendron simsii HOM05D000921 ORTHO05D004782 2.0e-243 846.7 1187 42.4
Hund26819 Selenicereus undatus HOM05D000921 ORTHO05D004782 2.6e-243 846.3 1108 44.9
CsaV3_3G048070 Cucumis sativus L. HOM05D000921 ORTHO05D004782 1.3e-242 844.0 1102 44.8
AUR62019100 Chenopodium quinoa HOM05D000921 ORTHO05D004782 6.4e-242 841.6 1149 42.5
Peaxi162Scf00454g00119 Petunia axillaris HOM05D000921 ORTHO05D004782 3.2e-241 839.3 1107 44.7
AUR62014358 Chenopodium quinoa HOM05D000921 ORTHO05D004782 7.0e-241 838.2 1107 43.5
ECA246G1489 Erigeron canadensis HOM05D000921 ORTHO05D004782 2.5e-238 829.7 1104 43.3
FAN08G1747 Fragaria x ananassa HOM05D000921 ORTHO05D004782 6.2e-237 825.1 1124 43.0
Sc06g0003790 Simmondsia chinensis HOM05D000921 ORTHO05D004782 7.0e-233 811.6 1098 42.8
DCAR_012852 Daucus carota HOM05D000921 ORTHO05D004782 4.3e-230 802.4 1099 42.9
ClCG11G014650 Citrullus lanatus HOM05D000921 ORTHO05D004782 2.2e-226 790.0 1126 42.5
EL10Ac1g00502 Beta vulgaris HOM05D000921 ORTHO05D004782 6.4e-218 761.9 1066 42.6
DCAR_019322 Daucus carota HOM05D000921 ORTHO05D004782 9.6e-214 748.0 1126 41.1
MD08G1200600 Malus domestica HOM05D000921 ORTHO05D004782 6.9e-212 741.9 881 48.8
CDE02G0144 Ceratophyllum demersum HOM05D000921 ORTHO05D004782 1.6e-208 730.7 1070 41.8
Solyc04g076500.4 Solanum lycopersicum HOM05D000921 ORTHO05D004782 7.1e-201 705.3 822 48.4
Cc10_g08460 Coffea canephora HOM05D000921 ORTHO05D004782 9.3e-193 678.3 718 51.4
Gohir.A06G031500 Gossypium hirsutum HOM05D000921 ORTHO05D004782 8.7e-191 671.8 1102 39.0
Ah.05g171400 Amaranthus hybridus HOM05D000921 ORTHO05D004782 2.9e-186 656.8 921 43.0
Gorai.010G033700 Gossypium raimondii HOM05D000921 ORTHO05D004782 3.9e-175 619.8 771 46.2
Sed0023880 Sechium edule HOM05D000921 ORTHO05D004782 3.9e-175 619.8 636 50.0
Gohir.D06G030700 Gossypium hirsutum HOM05D000921 ORTHO05D004782 1.5e-174 617.8 770 46.1
AagrBONN_evm.TU.Sc2ySwM_117.180 Anthoceros agrestis HOM05D000921 ORTHO05D004782 1.7e-165 587.8 1177 35.3
Lj4C739G4 Lonicera japonica HOM05D000921 ORTHO05D004782 8.5e-162 575.5 781 43.7
Oeu028591.1 Olea europaea HOM05D000921 ORTHO05D004782 9.7e-158 562.0 1011 37.0
Mapoly0001s0542 Marchantia polymorpha HOM05D000921 ORTHO05D004782 4.1e-156 556.6 1222 33.1
Pp3c20_23460 Physcomitrium patens HOM05D000921 ORTHO05D004782 6.3e-149 532.7 1200 33.5
SEGI_30803 Sequoiadendron giganteum HOM05D000921 ORTHO05D004782 1.0e-146 525.4 739 42.1
Cpa.g.sc21.32 Carica papaya HOM05D000921 ORTHO05D004782 1.0e-143 515.4 698 42.3
unitig_578.g16055 Utricularia gibba HOM05D000921 ORTHO05D004782 6.8e-143 512.7 1102 33.9
Os02g0162766 Oryza sativa ssp. japonica HOM05D000921 ORTHO05D004782 7.5e-142 509.2 679 42.9
vmacro21345 Vaccinium macrocarpon HOM05D000921 ORTHO05D004782 4.1e-132 476.9 461 54.7
VMungo1309G2985 Vigna mungo HOM05D000921 ORTHO05D004782 4.7e-128 463.4 668 41.3
CSS0003023 Camellia sinensis var. sinensis HOM05D000921 ORTHO05D004782 4.0e-127 460.3 432 55.8
BcaNung06615 Brassica carinata HOM05D000921 ORTHO05D004782 1.5e-126 458.4 458 53.1
Aa31LG2G10910 Aethionema arabicum HOM05D000921 ORTHO05D004782 3.4e-126 457.2 460 52.4
C01p35890 Brassica napus HOM05D000921 ORTHO05D004782 3.7e-125 453.8 457 52.5
BolC1t03548H Brassica oleracea HOM05D000921 ORTHO05D004782 3.7e-125 453.8 457 52.5
AL2G18210 Arabidopsis lyrata HOM05D000921 ORTHO05D004782 1.9e-124 451.4 452 52.0
Thhalv10023210m.g Eutrema salsugineum HOM05D000921 ORTHO05D004782 1.9e-124 451.4 464 50.4
Sp2g05370 Schrenkiella parvula HOM05D000921 ORTHO05D004782 1.9e-124 451.4 460 51.3
A01p28340 Brassica napus HOM05D000921 ORTHO05D004782 4.6e-123 446.8 444 53.2
AT1G58230 Arabidopsis thaliana HOM05D000921 ORTHO05D004782 7.8e-123 446.0 460 51.5
BraA01t02962Z Brassica rapa HOM05D000921 ORTHO05D004782 7.8e-123 446.0 444 53.2
Carub.0002s0634 Capsella rubella HOM05D000921 ORTHO05D004782 3.3e-121 440.7 443 52.1
CARHR053760 Cardamine hirsuta HOM05D000921 ORTHO05D004782 1.6e-120 438.3 460 50.9
Os06g0678700 Oryza sativa ssp. japonica HOM05D000921 ORTHO05D004782 9.9e-102 375.9 554 39.2
THA.LOC109116813 Tarenaya hassleriana HOM05D000921 ORTHO05D004782 1.1e-89 335.9 344 50.0
CBR_g9089 Chara braunii HOM05D000921 ORTHO05D004782 2.4e-84 318.2 457 39.6
vmacro21344 Vaccinium macrocarpon HOM05D000921 ORTHO05D004782 2.5e-73 281.6 532 36.1
SMO169G0155 Selaginella moellendorffii HOM05D000921 ORTHO05D004782 4.6e-67 260.8 345 40.3
Gohir.D06G030750 Gossypium hirsutum HOM05D000921 ORTHO05D004782 1.6e-64 252.3 374 41.4
Gorai.010G033800 Gossypium raimondii HOM05D000921 ORTHO05D004782 3.7e-64 251.1 374 41.7
Gohir.A02G078801 Gossypium hirsutum HOM05D000921 ORTHO05D004782 1.8e-63 248.8 300 47.0
Cc10_g08450 Coffea canephora HOM05D000921 ORTHO05D004782 5.0e-61 240.7 398 39.7
Sed0001609 Sechium edule HOM05D000921 ORTHO05D004782 2.4e-55 221.9 308 44.2
MD08G1200500 Malus domestica HOM05D000921 ORTHO05D004782 1.7e-48 199.1 207 47.8
Cpa.g.sc21.33 Carica papaya HOM05D000921 ORTHO05D004782 1.5e-41 176.0 204 52.9
Gohir.A02G078900 Gossypium hirsutum HOM05D000921 ORTHO05D004782 2.8e-40 171.8 147 61.9
Lj4A739G26 Lonicera japonica HOM05D000921 ORTHO05D004782 1.6e-38 166.0 262 42.4
Ah.05g171390 Amaranthus hybridus HOM05D000921 ORTHO05D004782 2.0e-33 149.1 203 39.4
CBR_g40583 Chara braunii HOM05D000921 ORTHO05D004782 2.4e-23 115.5 415 26.3
arahy.Tifrunner.gnm1.ann1.KCR83B Arachis hypogaea HOM05D000921 ORTHO05D004782 2.0e-22 112.5 180 38.9
CSS0012885 Camellia sinensis var. sinensis HOM05D000921 ORTHO05D004782 7.2e-20 104.0 265 30.6
THA.LOC104816792 Tarenaya hassleriana HOM05D000921 ORTHO05D004782 3.0e-18 98.6 86 60.5
Sc07g0005290 Simmondsia chinensis HOM05D000921 ORTHO05D004782 2.0e-17 95.9 183 34.4
HanXRQChr16g0501971 Helianthus annuus HOM05D000921 ORTHO05D004782 1.6e-11 76.3 77 49.4
Hma1.2p1_0125F.1_g058740 Hydrangea macrophylla HOM05D000921 ORTHO05D004782 3.6e-11 75.1 63 55.6
Cpa.g.sc474.1 Carica papaya HOM05D000921 ORTHO05D004782 3.1e-10 72.0 63 50.8
PRCOL_00007064 Prasinoderma coloniale HOM05D000921 ORTHO05D004782 7.5e-09 67.4 328 24.4
CSS0006749 Camellia sinensis var. sinensis HOM05D000921 ORTHO05D004782 9.8e-09 67.0 149 28.9
Nn8g40360 Nelumbo nucifera HOM05D000921 ORTHO05D004782 2.9e-08 65.5 90 37.8
Nn1g04217 Nelumbo nucifera HOM05D001236 ORTHO05D001090 9.2e-07 60.5 72 44.4


User provided reference genes

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