Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_013107 Vanilla planifolia HOM05D005870 ORTHO05D007216 9.7e-63 243.4 133 100.0
HPP92_013094 Vanilla planifolia HOM05D005870 ORTHO05D007216 4.8e-30 134.8 79 94.9
Sp2g28320 Schrenkiella parvula HOM05D005870 ORTHO05D007216 1.8e-24 116.3 122 56.6
MBI02_g35763_MAGBIO Magnolia biondii HOM05D005870 ORTHO05D007216 3.0e-24 115.5 104 63.5
Nn1g05359 Nelumbo nucifera HOM05D005870 ORTHO05D007216 4.0e-24 115.2 132 53.8
A02p43790 Brassica napus HOM05D005870 ORTHO05D007216 5.2e-24 114.8 121 55.4
BraA02t09303Z Brassica rapa HOM05D005870 ORTHO05D007216 5.2e-24 114.8 121 55.4
unitig_747.g21825 Utricularia gibba HOM05D000660 ORTHO05D000766 6.8e-24 114.4 113 53.1
Nn5g30105 Nelumbo nucifera HOM05D005870 ORTHO05D007216 8.8e-24 114.0 134 51.5
Thhalv10005022m.g Eutrema salsugineum HOM05D005870 ORTHO05D007216 1.5e-23 113.2 119 52.1
Aa31LG1G16740 Aethionema arabicum HOM05D005870 ORTHO05D007216 2.0e-23 112.8 105 61.9
BcaB02g09886 Brassica carinata HOM05D005870 ORTHO05D007216 2.0e-23 112.8 120 54.2
THA.LOC104801696 Tarenaya hassleriana HOM05D005870 ORTHO05D007216 2.6e-23 112.5 121 56.2
Peaxi162Scf00171g00927 Petunia axillaris HOM05D005870 ORTHO05D007216 3.4e-23 112.1 132 51.5
CAN.G65.97 Capsicum annuum HOM05D005870 ORTHO05D007216 4.4e-23 111.7 119 54.6
BcaB07g34228 Brassica carinata HOM05D005870 ORTHO05D007216 7.5e-23 110.9 103 58.3
PGSC0003DMG400026946 Solanum tuberosum HOM05D005870 ORTHO05D007216 7.5e-23 110.9 132 53.8
ECA232G4208 Erigeron canadensis HOM05D005870 ORTHO05D007216 9.8e-23 110.5 120 51.7
Nitab4.5_0000033g0220 Nicotiana tabacum HOM05D005870 ORTHO05D007216 1.3e-22 110.2 140 52.9
PGR004G1211 Punica granatum HOM05D005870 ORTHO05D007216 1.3e-22 110.2 99 63.6
Rhsim10G0163500 Rhododendron simsii HOM05D005870 ORTHO05D007216 1.3e-22 110.2 118 55.1
TWI53G1299 Tripterygium wilfordii HOM05D005870 ORTHO05D007216 1.7e-22 109.8 136 49.3
TWI74G0695 Tripterygium wilfordii HOM05D005870 ORTHO05D007216 1.7e-22 109.8 134 51.5
vmacro07307 Vaccinium macrocarpon HOM05D005870 ORTHO05D007216 2.8e-22 109.0 116 53.4
AT5G65220 Arabidopsis thaliana HOM05D005870 ORTHO05D007216 3.7e-22 108.6 122 51.6
Dinv13195 Davidia involucrata HOM05D005870 ORTHO05D007216 3.7e-22 108.6 134 50.7
Lsat_1_v5_gn_4_141420 Lactuca sativa HOM05D005870 ORTHO05D007216 3.7e-22 108.6 100 59.0
Nitab4.5_0006110g0010 Nicotiana tabacum HOM05D005870 ORTHO05D007216 3.7e-22 108.6 97 60.8
CiPaw.04G100500 Carya illinoinensis HOM05D005870 ORTHO05D007216 4.8e-22 108.2 116 55.2
MD00G1199600 Malus domestica HOM05D005870 ORTHO05D007216 6.3e-22 107.8 109 57.8
BcaC01g02758 Brassica carinata HOM05D005870 ORTHO05D007216 8.3e-22 107.5 103 60.2
BolC3t18343H Brassica oleracea HOM05D005870 ORTHO05D007216 8.3e-22 107.5 103 60.2
Sc03g0002050 Simmondsia chinensis HOM05D005870 ORTHO05D007216 8.3e-22 107.5 97 60.8
MSTRG.3774 Avicennia marina HOM05D005870 ORTHO05D007216 1.1e-21 107.1 117 53.0
C03p60860 Brassica napus HOM05D005870 ORTHO05D007216 1.1e-21 107.1 103 60.2
AL8G42760 Arabidopsis lyrata HOM05D005870 ORTHO05D007216 1.4e-21 106.7 122 52.5
ClCG10G008830 Citrullus lanatus HOM05D005870 ORTHO05D007216 1.4e-21 106.7 120 53.3
Prupe.6G188000 Prunus persica HOM05D005870 ORTHO05D007216 1.4e-21 106.7 121 52.1
Sopen03g028660 Solanum pennellii HOM05D005870 ORTHO05D007216 1.4e-21 106.7 122 50.8
Carub.0008s2608 Capsella rubella HOM05D005870 ORTHO05D007216 1.8e-21 106.3 122 51.6
CsaV3_4G008900 Cucumis sativus L. HOM05D005870 ORTHO05D007216 1.8e-21 106.3 99 58.6
Solyc03g097950.4 Solanum lycopersicum HOM05D005870 ORTHO05D007216 1.8e-21 106.3 122 50.8
Solyc06g072470.4 Solanum lycopersicum HOM05D005870 ORTHO05D007216 1.8e-21 106.3 97 59.8
Sopen06g028840 Solanum pennellii HOM05D005870 ORTHO05D007216 1.8e-21 106.3 97 59.8
Thecc.01G100700 Theobroma cacao HOM05D005870 ORTHO05D007216 1.8e-21 106.3 138 50.0
Actinidia20008 Actinidia chinensis HOM05D005870 ORTHO05D007216 2.4e-21 105.9 124 53.2
COL.COLO4_27254 Corchorus olitorius HOM05D005870 ORTHO05D007216 2.4e-21 105.9 135 48.9
Lj2A546G34 Lonicera japonica HOM05D005870 ORTHO05D007216 2.4e-21 105.9 112 56.2
PGSC0003DMG400033691 Solanum tuberosum HOM05D005870 ORTHO05D007216 2.4e-21 105.9 100 57.0
HanXRQChr15g0484171 Helianthus annuus HOM05D005870 ORTHO05D007216 3.1e-21 105.5 97 57.7
Aqoxy6G00780 Aquilegia oxysepala HOM05D005870 ORTHO05D007216 5.4e-21 104.8 121 48.8
A06p32070 Brassica napus HOM05D005870 ORTHO05D007216 5.4e-21 104.8 119 52.1
BraA06t26136Z Brassica rapa HOM05D005870 ORTHO05D007216 5.4e-21 104.8 119 52.1
Ciclev10026623m.g Citrus clementina HOM05D005870 ORTHO05D007216 5.4e-21 104.8 136 50.7
Nitab4.5_0000430g0130 Nicotiana tabacum HOM05D005870 ORTHO05D007216 5.4e-21 104.8 101 59.4
Atru.chr4.42 Acer truncatum HOM05D005870 ORTHO05D007216 7.0e-21 104.4 138 48.6
CANSAT01G0848 Cannabis sativa HOM05D005870 ORTHO05D007216 9.1e-21 104.0 134 46.3
Lalb_Chr12g0203881 Lupinus albus HOM05D005870 ORTHO05D007216 9.1e-21 104.0 118 53.4
MD01G1031300 Malus domestica HOM05D005870 ORTHO05D007216 9.1e-21 104.0 135 51.9
Lalb_Chr07g0185191 Lupinus albus HOM05D005870 ORTHO05D007216 1.2e-20 103.6 130 47.7
arahy.Tifrunner.gnm1.ann1.K43FII Arachis hypogaea HOM05D005870 ORTHO05D007216 1.6e-20 103.2 99 60.6
arahy.Tifrunner.gnm1.ann1.Q6429D Arachis hypogaea HOM05D005870 ORTHO05D007216 1.6e-20 103.2 99 60.6
MBI05_g37050_MAGBIO Magnolia biondii HOM05D005870 ORTHO05D007216 1.6e-20 103.2 65 80.0
Nitab4.5_0004855g0010 Nicotiana tabacum HOM05D005870 ORTHO05D007216 1.6e-20 103.2 100 57.0
TAR381G0757 Trochodendron aralioides HOM05D005870 ORTHO05D007216 1.6e-20 103.2 133 51.1
CDE10G0106 Ceratophyllum demersum HOM05D005870 ORTHO05D007216 2.7e-20 102.4 130 49.2
AUR62003803 Chenopodium quinoa HOM05D005870 ORTHO05D007216 2.7e-20 102.4 97 55.7
FAN23G0590 Fragaria x ananassa HOM05D005870 ORTHO05D007216 2.7e-20 102.4 105 59.0
CARHR279150 Cardamine hirsuta HOM05D005870 ORTHO05D007216 5.9e-20 101.3 119 48.7
Medtr8g090185 Medicago truncatula HOM05D005870 ORTHO05D007216 5.9e-20 101.3 97 58.8
Hma1.2p1_0308F.1_g120250 Hydrangea macrophylla HOM05D005870 ORTHO05D007216 7.7e-20 100.9 140 47.1
Potri.007G093700 Populus trichocarpa HOM05D005870 ORTHO05D007216 7.7e-20 100.9 114 51.8
Duzib147G1590 Durio zibethinus HOM05D005870 ORTHO05D007216 1.0e-19 100.5 99 57.6
Oeu002170.1 Olea europaea HOM05D005870 ORTHO05D007216 1.0e-19 100.5 126 54.8
Ca_17742_v3 Cicer arietinum L. HOM05D005870 ORTHO05D007216 2.3e-19 99.4 122 50.0
CDE10G0428 Ceratophyllum demersum HOM05D005870 ORTHO05D007216 2.9e-19 99.0 97 55.7
Eucgr.I00441 Eucalyptus grandis HOM05D005870 ORTHO05D007216 2.9e-19 99.0 104 51.9
Sed0015800 Sechium edule HOM05D005870 ORTHO05D007216 2.9e-19 99.0 120 51.7
Cpa.g.sc615.2 Carica papaya HOM05D005870 ORTHO05D007216 5.0e-19 98.2 135 50.4
QL06p049269 Quercus lobata HOM05D005870 ORTHO05D007216 6.6e-19 97.8 132 46.2
VMungo0251G1964 Vigna mungo HOM05D005870 ORTHO05D007216 6.6e-19 97.8 97 59.8
Migut.H02353 Erythranthe guttata HOM05D005870 ORTHO05D007216 8.6e-19 97.4 133 46.6
Cc07_g15090 Coffea canephora HOM05D005870 ORTHO05D007216 1.1e-18 97.1 139 48.2
Duzib187G0334 Durio zibethinus HOM05D005870 ORTHO05D007216 1.1e-18 97.1 125 49.6
FAN28G1626 Fragaria x ananassa HOM05D005870 ORTHO05D007216 1.1e-18 97.1 105 57.1
EL10Ac6g15115 Beta vulgaris HOM05D005870 ORTHO05D007216 1.5e-18 96.7 97 55.7
Gohir.D11G220900 Gossypium hirsutum HOM05D005870 ORTHO05D007216 1.5e-18 96.7 100 53.0
Gorai.007G237100 Gossypium raimondii HOM05D005870 ORTHO05D007216 1.5e-18 96.7 100 53.0
PSO210G6840 Papaver somniferum HOM05D005870 ORTHO05D007216 1.5e-18 96.7 121 46.3
RcHm_v2.0_Chr2g0113161 Rosa chinensis HOM05D005870 ORTHO05D007216 1.5e-18 96.7 134 49.3
SGA_v2.0_scaffold111G31512 Striga asiatica HOM05D005870 ORTHO05D007216 1.5e-18 96.7 97 55.7
DCAR_014215 Daucus carota HOM05D005870 ORTHO05D007216 1.9e-18 96.3 105 52.4
FAN26G0235 Fragaria x ananassa HOM05D005870 ORTHO05D007216 1.9e-18 96.3 105 55.2
Gohir.A11G202300 Gossypium hirsutum HOM05D005870 ORTHO05D007216 3.3e-18 95.5 100 53.0
PSO447G0167 Papaver somniferum HOM05D005870 ORTHO05D007216 3.3e-18 95.5 121 45.5
Phvul.002G256700 Phaseolus vulgaris HOM05D005870 ORTHO05D007216 3.3e-18 95.5 97 58.8
Zm00001eb255290 Zea mays HOM05D005870 ORTHO05D007216 3.3e-18 95.5 93 58.1
Zm00001eb194130 Zea mays HOM05D005870 ORTHO05D007216 4.2e-18 95.1 123 50.4
FvH4_1g20710 Fragaria vesca HOM05D005870 ORTHO05D007216 5.5e-18 94.7 101 57.4
FAN19G2750 Fragaria x ananassa HOM05D005870 ORTHO05D007216 5.5e-18 94.7 101 57.4
Manes.13G093516 Manihot esculenta HOM05D005870 ORTHO05D007216 7.2e-18 94.4 131 48.1
Psat7g055240 Pisum sativum HOM05D005870 ORTHO05D007216 9.5e-18 94.0 123 52.0
Os02g0754300 Oryza sativa ssp. japonica HOM05D005870 ORTHO05D007216 1.2e-17 93.6 127 50.4
Actinidia06560 Actinidia chinensis HOM05D005870 ORTHO05D007216 1.6e-17 93.2 116 51.7
AUR62001999 Chenopodium quinoa HOM05D005870 ORTHO05D007216 2.8e-17 92.4 97 52.6
MELO3C018954.2 Cucumis melo HOM05D005870 ORTHO05D007216 2.8e-17 92.4 61 75.4
SalBow3G2704 Salvia bowleyana HOM05D005870 ORTHO05D007216 2.8e-17 92.4 104 52.9
Glyma.05G178000 Glycine max HOM05D005870 ORTHO05D007216 3.6e-17 92.0 119 48.7
Cfa002651 Carpinus fangiana HOM05D005870 ORTHO05D007216 4.7e-17 91.7 97 54.6
Hund13620 Selenicereus undatus HOM05D005870 ORTHO05D007216 4.7e-17 91.7 120 50.0
TPR.G6297 Trifolium pratense HOM05D005870 ORTHO05D007216 4.7e-17 91.7 97 52.6
Zm00001eb249540 Zea mays HOM05D005870 ORTHO05D007216 4.7e-17 91.7 69 66.7
Glyma.08G135000 Glycine max HOM05D005870 ORTHO05D007216 8.0e-17 90.9 119 49.6
MSTRG.15716 Avicennia marina HOM05D005870 ORTHO05D007216 1.4e-16 90.1 94 55.3
SGA_v2.0_scaffold54G19505 Striga asiatica HOM05D005870 ORTHO05D007216 3.0e-16 89.0 106 52.8
Haze_24920 Corylus avellana HOM05D005870 ORTHO05D007216 4.0e-16 88.6 93 54.8
Zm00001eb335180 Zea mays HOM05D005870 ORTHO05D007216 4.0e-16 88.6 69 63.8
Sabra07G0077600 Salix brachista HOM05D005870 ORTHO05D007216 8.9e-16 87.4 107 48.6
Lj4g0027302 Lotus japonicus HOM05D005870 ORTHO05D007216 2.0e-15 86.3 119 50.4
AagrBONN_evm.TU.Sc2ySwM_117.2528 Anthoceros agrestis HOM05D005870 ORTHO05D007216 1.1e-13 80.5 98 48.0
Pp3c9_19800 Physcomitrium patens HOM05D005870 ORTHO05D007216 1.4e-13 80.1 104 45.2
Hund16294 Selenicereus undatus HOM05D005870 ORTHO05D007216 5.4e-13 78.2 128 45.3
Mapoly0011s0026 Marchantia polymorpha HOM05D005870 ORTHO05D007216 7.8e-12 74.3 128 35.9
ATR0782G037 Amborella trichopoda HOM05D005870 ORTHO05D007216 1.3e-11 73.6 111 45.0
SMO347G0042 Selaginella moellendorffii HOM05D005870 ORTHO05D007216 1.6e-09 66.6 65 49.2
CBR_g8034 Chara braunii HOM05D005870 ORTHO05D007216 6.8e-08 61.2 76 38.2


User provided reference genes

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