Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_013057 Vanilla planifolia HOM05D006218 ORTHO05D007338 5.8e-77 291.2 190 100.0
HPP92_001390 Vanilla planifolia HOM05D006218 ORTHO05D007338 1.4e-67 260.0 185 95.1
Cfa013418 Carpinus fangiana HOM05D000602 ORTHO05D007338 5.0e-28 128.6 181 38.1
Medtr2g100200 Medicago truncatula HOM05D006218 ORTHO05D007338 2.1e-26 123.2 185 33.0
Ca_01194_v3 Cicer arietinum L. HOM05D006218 ORTHO05D007338 1.8e-25 120.2 185 33.0
Atru.BG.229.p Acer truncatum HOM05D006218 ORTHO05D007338 6.7e-25 118.2 184 52.2
Lj4P809T22 Lonicera japonica HOM05D006218 ORTHO05D007338 6.5e-20 101.7 185 48.1
SalBow6G0752 Salvia bowleyana HOM05D006218 ORTHO05D007338 6.5e-20 101.7 188 28.7
Thhalv10003177m.g Eutrema salsugineum HOM05D006218 ORTHO05D007338 2.7e-18 96.3 182 42.9
FAN13G2474 Fragaria x ananassa HOM05D002007 ORTHO05D000355 1.4e-17 94.0 92 41.3
Lsat_1_v5_gn_2_69281 Lactuca sativa HOM05D006218 ORTHO05D007338 1.8e-17 93.6 185 29.7
QL02p015096 Quercus lobata HOM05D006218 ORTHO05D007338 2.3e-17 93.2 184 48.4
Rhsim10G0062900 Rhododendron simsii HOM05D006218 ORTHO05D007338 3.9e-17 92.4 184 42.9
CsaV3_4G037400 Cucumis sativus L. HOM05D006218 ORTHO05D007338 1.3e-15 87.4 182 46.2
Psat5g293680 Pisum sativum HOM05D006218 ORTHO05D007338 6.3e-15 85.1 92 42.4
CDE02G2496 Ceratophyllum demersum HOM05D006218 ORTHO05D007338 1.5e-13 80.5 185 51.9
MELO3C017038.2 Cucumis melo HOM05D006218 ORTHO05D007338 4.5e-13 79.0 182 45.1
RcHm_v2.0_Chr7g0215771 Rosa chinensis HOM05D006218 ORTHO05D007338 5.9e-13 78.6 79 40.5
TPR.G6568 Trifolium pratense HOM05D006218 ORTHO05D007338 1.0e-12 77.8 130 32.3
FvH4_5g24880 Fragaria vesca HOM05D006218 ORTHO05D007338 1.7e-12 77.0 75 38.7
FAN08G1989 Fragaria x ananassa HOM05D006218 ORTHO05D007338 1.7e-12 77.0 151 47.7
HanXRQChr10g0293751 Helianthus annuus HOM05D006218 ORTHO05D007338 2.2e-12 76.6 96 35.4
Duzib093G0304 Durio zibethinus HOM05D006218 ORTHO05D007338 3.8e-12 75.9 182 48.9
Rhsim10G0065400 Rhododendron simsii HOM05D006218 ORTHO05D007338 3.8e-12 75.9 80 41.2
COL.COLO4_19322 Corchorus olitorius HOM05D006218 ORTHO05D007338 3.2e-11 72.8 70 45.7
ClCG11G018820 Citrullus lanatus HOM05D006218 ORTHO05D007338 5.5e-11 72.0 183 42.1
Aqoxy6G01612 Aquilegia oxysepala HOM05D006218 ORTHO05D007338 2.3e-09 66.6 184 50.0
GSVIVG01013390001 Vitis vinifera HOM05D006218 ORTHO05D007338 3.9e-09 65.9 184 50.0
AUR62005208 Chenopodium quinoa HOM05D006218 ORTHO05D007338 5.1e-09 65.5 41 65.9
EL10Ac4g09913 Beta vulgaris HOM05D006218 ORTHO05D007338 2.6e-08 63.2 41 65.9
ECA247G3408 Erigeron canadensis HOM05D006218 ORTHO05D007338 4.4e-08 62.4 114 29.8
Migut.O00315 Erythranthe guttata HOM05D006218 ORTHO05D007338 4.4e-08 62.4 40 60.0
Hma1.2p1_0612F.1_g188870 Hydrangea macrophylla HOM05D006218 ORTHO05D007338 4.4e-08 62.4 78 37.2
DCAR_006421 Daucus carota HOM05D006218 ORTHO05D007338 5.7e-08 62.0 184 47.8
TAR625G0531 Trochodendron aralioides HOM05D006218 ORTHO05D007338 1.7e-07 60.5 56 48.2
RcHm_v2.0_Chr7g0219831 Rosa chinensis HOM05D006218 ORTHO05D007338 2.2e-07 60.1 106 33.0
Cc00_g16990 Coffea canephora HOM05D006218 ORTHO05D007338 2.8e-07 59.7 184 48.4
TWI39G0099 Tripterygium wilfordii HOM05D006218 ORTHO05D007338 2.8e-07 59.7 41 63.4
Os02g0304800 Oryza sativa ssp. japonica HOM05D006218 ORTHO05D007338 3.7e-07 59.3 43 55.8
RcHm_v2.0_Chr7g0215761 Rosa chinensis HOM05D006218 ORTHO05D007338 6.3e-07 58.5 41 61.0
Zm00001eb135240 Zea mays HOM05D006218 ORTHO05D007338 6.3e-07 58.5 56 42.9
Nn5g30994 Nelumbo nucifera HOM05D006218 ORTHO05D007338 8.2e-07 58.2 53 45.3
Hma1.2p1_0060F.1_g032840 Hydrangea macrophylla HOM05D006218 ORTHO05D007338 1.1e-06 57.8 184 47.8
HanXRQChr14g0446721 Helianthus annuus HOM05D006218 ORTHO05D007338 1.8e-06 57.0 40 57.5
Rhsim10G0066100 Rhododendron simsii HOM05D006218 ORTHO05D007338 3.1e-06 56.2 41 56.1
Ah.04g161150 Amaranthus hybridus HOM05D006218 ORTHO05D007338 5.3e-06 55.5 37 64.9
arahy.Tifrunner.gnm1.ann1.AR053R Arachis hypogaea HOM05D000001 ORTHO05D000003 5.3e-06 55.5 80 30.0
arahy.Tifrunner.gnm1.ann1.GET2P3 Arachis hypogaea HOM05D000001 ORTHO05D000003 5.3e-06 55.5 80 30.0
Dinv31962 Davidia involucrata HOM05D006218 ORTHO05D007338 5.3e-06 55.5 36 66.7
Cpa.g.sc428.8 Carica papaya HOM05D006218 ORTHO05D007338 7.0e-06 55.1 44 50.0
Manes.01G131700 Manihot esculenta HOM05D006218 ORTHO05D007338 7.0e-06 55.1 48 45.8
SHI24507 Sapria himalayana HOM05D006218 ORTHO05D007338 7.0e-06 55.1 176 23.9
Thecc.08G062100 Theobroma cacao HOM05D006218 ORTHO05D007338 9.1e-06 54.7 33 63.6


User provided reference genes

Program Settings