Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_013017 Vanilla planifolia HOM05D002281 ORTHO05D005599 2.8e-25 117.9 60 100.0
HPP92_013019 Vanilla planifolia HOM05D002281 ORTHO05D005599 4.0e-24 114.0 57 100.0
Nn1g03089 Nelumbo nucifera HOM05D002281 ORTHO05D005599 3.9e-19 97.4 57 80.7
TAR362G0445 Trochodendron aralioides HOM05D002281 ORTHO05D005599 3.9e-19 97.4 57 84.2
Mapoly0078s0045 Marchantia polymorpha HOM05D002281 ORTHO05D005599 5.0e-19 97.1 57 78.9
PSO170G6144 Papaver somniferum HOM05D002281 ORTHO05D005599 6.6e-19 96.7 57 82.5
PSO674G0074 Papaver somniferum HOM05D002281 ORTHO05D005599 6.6e-19 96.7 57 82.5
Aqoxy5G01434 Aquilegia oxysepala HOM05D002281 ORTHO05D005599 8.6e-19 96.3 57 80.7
Duzib106G1897 Durio zibethinus HOM05D002281 ORTHO05D005599 4.3e-18 94.0 54 83.3
Gohir.A13G102900 Gossypium hirsutum HOM05D002281 ORTHO05D005599 4.3e-18 94.0 54 83.3
Gohir.D13G106101 Gossypium hirsutum HOM05D002281 ORTHO05D005599 4.3e-18 94.0 54 83.3
Gorai.013G119000 Gossypium raimondii HOM05D002281 ORTHO05D005599 4.3e-18 94.0 54 83.3
SMO348G0052 Selaginella moellendorffii HOM05D002281 ORTHO05D005599 4.3e-18 94.0 57 77.2
Dinv05786 Davidia involucrata HOM05D002281 ORTHO05D005599 5.6e-18 93.6 54 85.2
SalBow7G0462 Salvia bowleyana HOM05D002281 ORTHO05D005599 5.6e-18 93.6 58 77.6
SalBow7G2659 Salvia bowleyana HOM05D002281 ORTHO05D005599 5.6e-18 93.6 58 77.6
Nn6g32299 Nelumbo nucifera HOM05D002281 ORTHO05D005599 7.3e-18 93.2 57 77.2
ATR0787G096 Amborella trichopoda HOM05D002281 ORTHO05D005599 9.5e-18 92.8 57 77.2
ECA233G3880 Erigeron canadensis HOM05D002281 ORTHO05D005599 9.5e-18 92.8 54 83.3
HanXRQChr04g0111671 Helianthus annuus HOM05D002281 ORTHO05D005599 9.5e-18 92.8 54 83.3
Lsat_1_v5_gn_8_2941 Lactuca sativa HOM05D002281 ORTHO05D005599 9.5e-18 92.8 54 83.3
Lj2A49T38 Lonicera japonica HOM05D002281 ORTHO05D005599 9.5e-18 92.8 54 83.3
Thecc.05G264800 Theobroma cacao HOM05D002281 ORTHO05D005599 9.5e-18 92.8 58 77.6
CSS0028465 Camellia sinensis var. sinensis HOM05D002281 ORTHO05D005599 6.2e-17 90.1 54 79.6
Cpa.g.sc51.37 Carica papaya HOM05D002281 ORTHO05D005599 6.2e-17 90.1 54 79.6
Ciclev10023801m.g Citrus clementina HOM05D002281 ORTHO05D005599 6.2e-17 90.1 54 79.6
COL.COLO4_38179 Corchorus olitorius HOM05D002281 ORTHO05D005599 6.2e-17 90.1 54 79.6
Hma1.2p1_0153F.1_g067890 Hydrangea macrophylla HOM05D002281 ORTHO05D005599 6.2e-17 90.1 54 79.6
Hma1.2p1_0153F.1_g067920 Hydrangea macrophylla HOM05D002281 ORTHO05D005599 6.2e-17 90.1 54 79.6
Os03g0143800 Oryza sativa ssp. japonica HOM05D002281 ORTHO05D005599 6.2e-17 90.1 57 77.2
Pp3c21_8020 Physcomitrium patens HOM05D002281 ORTHO05D005599 6.2e-17 90.1 57 77.2
GSVIVG01026355001 Vitis vinifera HOM05D002281 ORTHO05D005599 6.2e-17 90.1 54 81.5
Zm00001eb003550 Zea mays HOM05D002281 ORTHO05D005599 6.2e-17 90.1 56 78.6
AagrBONN_evm.TU.Sc2ySwM_344.4016 Anthoceros agrestis HOM05D002281 ORTHO05D005599 8.1e-17 89.7 57 75.4
TWI60G0078 Tripterygium wilfordii HOM05D002281 ORTHO05D005599 8.1e-17 89.7 58 74.1
CANSAT54G0020 Cannabis sativa HOM05D002281 ORTHO05D005599 1.1e-16 89.4 54 81.5
Migut.C01166 Erythranthe guttata HOM05D002281 ORTHO05D005599 1.1e-16 89.4 54 79.6
SGA_v2.0_scaffold52G18996 Striga asiatica HOM05D002281 ORTHO05D005599 1.1e-16 89.4 58 70.7
Actinidia03823 Actinidia chinensis HOM05D002281 ORTHO05D005599 1.4e-16 89.0 54 79.6
MSTRG.1472 Avicennia marina HOM05D002281 ORTHO05D005599 1.4e-16 89.0 54 74.1
CDE01G0576 Ceratophyllum demersum HOM05D002281 ORTHO05D005599 1.4e-16 89.0 58 75.9
Pp3c2_6040 Physcomitrium patens HOM05D002281 ORTHO05D005599 1.4e-16 89.0 58 70.7
DCAR_005524 Daucus carota HOM05D002281 ORTHO05D005599 1.8e-16 88.6 54 79.6
Cc10_g10590 Coffea canephora HOM05D002281 ORTHO05D005599 2.3e-16 88.2 54 79.6
Potri.013G051200 Populus trichocarpa HOM05D002281 ORTHO05D005599 2.3e-16 88.2 54 77.8
Potri.019G025200 Populus trichocarpa HOM05D002281 ORTHO05D005599 2.3e-16 88.2 54 77.8
Sabra19G0034800 Salix brachista HOM05D002281 ORTHO05D005599 2.3e-16 88.2 54 77.8
Sabra19G0037800 Salix brachista HOM05D002281 ORTHO05D005599 2.3e-16 88.2 54 77.8
Sc09g0001770 Simmondsia chinensis HOM05D002281 ORTHO05D005599 2.3e-16 88.2 54 77.8
EL10Ac4g09788 Beta vulgaris HOM05D002281 ORTHO05D005599 3.1e-16 87.8 54 77.8
Manes.09G145500 Manihot esculenta HOM05D002281 ORTHO05D005599 3.1e-16 87.8 54 77.8
Rhsim05G0168900 Rhododendron simsii HOM05D002281 ORTHO05D005599 3.1e-16 87.8 54 79.6
Cfa006304 Carpinus fangiana HOM05D002281 ORTHO05D005599 4.0e-16 87.4 54 77.8
PGR142G2635 Punica granatum HOM05D002281 ORTHO05D005599 5.2e-16 87.0 54 74.1
Hund07164 Selenicereus undatus HOM05D002281 ORTHO05D005599 5.2e-16 87.0 54 75.9
CiPaw.07G076600 Carya illinoinensis HOM05D002281 ORTHO05D005599 6.8e-16 86.7 54 77.8
Haze_04485 Corylus avellana HOM05D002281 ORTHO05D005599 6.8e-16 86.7 54 77.8
MD12G1252900 Malus domestica HOM05D002281 ORTHO05D005599 6.8e-16 86.7 54 75.9
FvH4_6g01330 Fragaria vesca HOM05D002281 ORTHO05D005599 8.9e-16 86.3 54 77.8
FAN09G1447 Fragaria x ananassa HOM05D002281 ORTHO05D005599 8.9e-16 86.3 54 77.8
FAN14G5004 Fragaria x ananassa HOM05D002281 ORTHO05D005599 8.9e-16 86.3 54 77.8
Medtr7g116590 Medicago truncatula HOM05D002281 ORTHO05D005599 8.9e-16 86.3 58 74.1
Sabra13G0046600 Salix brachista HOM05D002281 ORTHO05D005599 8.9e-16 86.3 54 75.9
Nitab4.5_0000051g0330 Nicotiana tabacum HOM05D002281 ORTHO05D005599 1.2e-15 85.9 54 77.8
Nitab4.5_0000494g0100 Nicotiana tabacum HOM05D002281 ORTHO05D005599 1.2e-15 85.9 54 77.8
Peaxi162Scf00285g00226 Petunia axillaris HOM05D002281 ORTHO05D005599 1.2e-15 85.9 54 79.6
ClCG03G011410 Citrullus lanatus HOM05D002281 ORTHO05D005599 1.5e-15 85.5 54 75.9
MELO3C015463.2 Cucumis melo HOM05D002281 ORTHO05D005599 1.5e-15 85.5 54 75.9
CsaV3_1G040360 Cucumis sativus L. HOM05D002281 ORTHO05D005599 1.5e-15 85.5 54 75.9
Glyma.03G253000 Glycine max HOM05D002281 ORTHO05D005599 1.5e-15 85.5 54 77.8
Glyma.19G250600 Glycine max HOM05D002281 ORTHO05D005599 1.5e-15 85.5 54 77.8
Lj1g0020458 Lotus japonicus HOM05D002281 ORTHO05D005599 1.5e-15 85.5 54 77.8
RcHm_v2.0_Chr3g0448901 Rosa chinensis HOM05D002281 ORTHO05D005599 1.5e-15 85.5 54 75.9
Eucgr.B02169 Eucalyptus grandis HOM05D002281 ORTHO05D005599 2.6e-15 84.7 54 75.9
Prupe.6G354800 Prunus persica HOM05D002281 ORTHO05D005599 2.6e-15 84.7 54 75.9
Ca_09474_v3 Cicer arietinum L. HOM05D002281 ORTHO05D005599 3.4e-15 84.3 54 75.9
FAN05G1240 Fragaria x ananassa HOM05D002281 ORTHO05D005599 3.4e-15 84.3 54 75.9
FAN05G1274 Fragaria x ananassa HOM05D002281 ORTHO05D005599 3.4e-15 84.3 54 75.9
Sed0017844 Sechium edule HOM05D002281 ORTHO05D005599 3.4e-15 84.3 54 75.9
unitig_736.g22260 Utricularia gibba HOM05D002281 ORTHO05D005599 3.4e-15 84.3 54 72.2
VMungo0540G0745 Vigna mungo HOM05D002281 ORTHO05D005599 3.4e-15 84.3 54 75.9
Atru.chr2.1138 Acer truncatum HOM05D002281 ORTHO05D005599 4.4e-15 84.0 58 72.4
Lalb_Chr18g0044201 Lupinus albus HOM05D002281 ORTHO05D005599 4.4e-15 84.0 54 75.9
Phvul.006G107600 Phaseolus vulgaris HOM05D002281 ORTHO05D005599 4.4e-15 84.0 54 75.9
Psat0s3583g0040 Pisum sativum HOM05D002281 ORTHO05D005599 4.4e-15 84.0 54 75.9
Ah.06g188740 Amaranthus hybridus HOM05D002281 ORTHO05D005599 7.5e-15 83.2 54 77.8
CAN.G61.7 Capsicum annuum HOM05D002281 ORTHO05D005599 7.5e-15 83.2 54 75.9
CARHR194610 Cardamine hirsuta HOM05D002281 ORTHO05D005599 7.5e-15 83.2 54 74.1
Solyc11g013280.1 Solanum lycopersicum HOM05D002281 ORTHO05D005599 9.8e-15 82.8 54 75.9
Sopen11g008300 Solanum pennellii HOM05D002281 ORTHO05D005599 9.8e-15 82.8 54 75.9
THA.LOC104820753 Tarenaya hassleriana HOM05D002281 ORTHO05D005599 9.8e-15 82.8 54 72.2
arahy.Tifrunner.gnm1.ann1.KCE1UK Arachis hypogaea HOM05D002281 ORTHO05D005599 2.2e-14 81.6 54 74.1
arahy.Tifrunner.gnm1.ann1.T4Q4MP Arachis hypogaea HOM05D002281 ORTHO05D005599 2.2e-14 81.6 54 74.1
SHI14432 Sapria himalayana HOM05D002281 ORTHO05D005599 2.2e-14 81.6 54 70.4
Aa31LG11G11220 Aethionema arabicum HOM05D002281 ORTHO05D005599 2.9e-14 81.3 54 72.2
AL6G29660 Arabidopsis lyrata HOM05D002281 ORTHO05D005599 2.9e-14 81.3 54 72.2
AT5G18410 Arabidopsis thaliana HOM05D002281 ORTHO05D005599 2.9e-14 81.3 54 72.2
Carub.0006s1667 Capsella rubella HOM05D002281 ORTHO05D005599 2.9e-14 81.3 54 72.2
BolC3t13512H Brassica oleracea HOM05D002281 ORTHO05D005599 4.9e-14 80.5 54 70.4
CBR_g74560 Chara braunii HOM05D002281 ORTHO05D005599 4.9e-14 80.5 57 64.9
BcaB01g05191 Brassica carinata HOM05D002281 ORTHO05D005599 6.4e-14 80.1 54 70.4
C03p10320 Brassica napus HOM05D002281 ORTHO05D005599 6.4e-14 80.1 54 70.4
BraA03t10208Z Brassica rapa HOM05D002281 ORTHO05D005599 6.4e-14 80.1 54 70.4
Sp6g25910 Schrenkiella parvula HOM05D002281 ORTHO05D005599 6.4e-14 80.1 54 70.4
A03p08830 Brassica napus HOM05D002281 ORTHO05D005599 1.9e-13 78.6 54 68.5
Thhalv10012457m.g Eutrema salsugineum HOM05D002281 ORTHO05D005599 2.4e-13 78.2 54 72.2
AUR62000642 Chenopodium quinoa HOM05D002281 ORTHO05D005599 9.2e-13 76.3 49 73.5


User provided reference genes

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