Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_013015 Vanilla planifolia HOM05D002281 ORTHO05D005599 1.6e-146 522.7 263 100.0
Os03g0143800 Oryza sativa ssp. japonica HOM05D002281 ORTHO05D005599 9.3e-118 427.2 347 66.6
Duzib106G1897 Durio zibethinus HOM05D002281 ORTHO05D005599 1.8e-116 422.9 330 67.9
Thecc.05G264800 Theobroma cacao HOM05D002281 ORTHO05D005599 8.7e-116 420.6 347 65.7
CsaV3_1G040370 Cucumis sativus L. HOM05D002281 ORTHO05D005599 9.6e-115 417.2 320 68.1
Zm00001eb003550 Zea mays HOM05D002281 ORTHO05D005599 9.6e-115 417.2 347 64.8
Ciclev10023801m.g Citrus clementina HOM05D002281 ORTHO05D005599 3.7e-114 415.2 347 64.3
ClCG03G011400 Citrullus lanatus HOM05D002281 ORTHO05D005599 6.3e-114 414.5 334 65.9
CiPaw.07G076600 Carya illinoinensis HOM05D002281 ORTHO05D005599 1.4e-113 413.3 348 64.7
Nn1g03089 Nelumbo nucifera HOM05D002281 ORTHO05D005599 1.4e-113 413.3 345 64.1
Actinidia03824 Actinidia chinensis HOM05D002281 ORTHO05D005599 1.8e-113 412.9 348 63.5
Aqoxy5G01434 Aquilegia oxysepala HOM05D002281 ORTHO05D005599 1.8e-113 412.9 347 64.3
GSVIVG01026355001 Vitis vinifera HOM05D002281 ORTHO05D005599 1.8e-113 412.9 348 64.1
TAR362G0445 Trochodendron aralioides HOM05D002281 ORTHO05D005599 2.4e-113 412.5 347 64.6
HanXRQChr04g0111671 Helianthus annuus HOM05D002281 ORTHO05D005599 4.1e-113 411.8 348 63.5
AL6G29660 Arabidopsis lyrata HOM05D002281 ORTHO05D005599 5.3e-113 411.4 348 62.9
Sp6g25910 Schrenkiella parvula HOM05D002281 ORTHO05D005599 5.3e-113 411.4 348 62.9
Dinv05786 Davidia involucrata HOM05D002281 ORTHO05D005599 6.9e-113 411.0 347 63.7
ECA233G3880 Erigeron canadensis HOM05D002281 ORTHO05D005599 6.9e-113 411.0 347 63.7
Gohir.A13G102900 Gossypium hirsutum HOM05D002281 ORTHO05D005599 9.0e-113 410.6 346 64.5
Gohir.D13G106101 Gossypium hirsutum HOM05D002281 ORTHO05D005599 9.0e-113 410.6 346 64.5
Gorai.013G119000 Gossypium raimondii HOM05D002281 ORTHO05D005599 9.0e-113 410.6 346 64.5
BcaB01g05191 Brassica carinata HOM05D002281 ORTHO05D005599 1.2e-112 410.2 348 62.6
BolC3t13512H Brassica oleracea HOM05D002281 ORTHO05D005599 1.2e-112 410.2 348 62.6
Rhsim05G0168900 Rhododendron simsii HOM05D002281 ORTHO05D005599 2.0e-112 409.5 358 62.0
AT5G18410 Arabidopsis thaliana HOM05D002281 ORTHO05D005599 3.4e-112 408.7 347 62.8
CSS0028465 Camellia sinensis var. sinensis HOM05D002281 ORTHO05D005599 3.4e-112 408.7 347 63.4
Migut.C01166 Erythranthe guttata HOM05D002281 ORTHO05D005599 3.4e-112 408.7 347 62.8
Eucgr.B02169 Eucalyptus grandis HOM05D002281 ORTHO05D005599 3.4e-112 408.7 348 62.4
Thhalv10012457m.g Eutrema salsugineum HOM05D002281 ORTHO05D005599 3.4e-112 408.7 347 62.8
BraA03t10208Z Brassica rapa HOM05D002281 ORTHO05D005599 4.5e-112 408.3 353 61.8
Carub.0006s1667 Capsella rubella HOM05D002281 ORTHO05D005599 4.5e-112 408.3 347 62.5
CARHR194610 Cardamine hirsuta HOM05D002281 ORTHO05D005599 5.9e-112 407.9 347 62.5
Manes.09G145500 Manihot esculenta HOM05D002281 ORTHO05D005599 7.6e-112 407.5 347 63.1
Sc09g0001770 Simmondsia chinensis HOM05D002281 ORTHO05D005599 7.6e-112 407.5 347 62.8
AUR62006997 Chenopodium quinoa HOM05D002281 ORTHO05D005599 1.0e-111 407.1 348 62.4
ATR0787G220 Amborella trichopoda HOM05D002281 ORTHO05D005599 1.3e-111 406.8 348 63.5
Solyc11g013280.1 Solanum lycopersicum HOM05D002281 ORTHO05D005599 1.7e-111 406.4 347 62.5
Potri.019G025200 Populus trichocarpa HOM05D002281 ORTHO05D005599 2.2e-111 406.0 347 63.1
Lalb_Chr18g0044191 Lupinus albus HOM05D002281 ORTHO05D005599 2.9e-111 405.6 348 62.4
PGR142G2635 Punica granatum HOM05D002281 ORTHO05D005599 3.8e-111 405.2 347 62.5
SalBow7G0462 Salvia bowleyana HOM05D002281 ORTHO05D005599 3.8e-111 405.2 347 62.8
SalBow7G2659 Salvia bowleyana HOM05D002281 ORTHO05D005599 3.8e-111 405.2 347 62.8
Hma1.2p1_0153F.1_g067890 Hydrangea macrophylla HOM05D002281 ORTHO05D005599 5.0e-111 404.8 343 63.8
THA.LOC104820753 Tarenaya hassleriana HOM05D002281 ORTHO05D005599 5.0e-111 404.8 347 62.2
CAN.G61.6 Capsicum annuum HOM05D002281 ORTHO05D005599 6.5e-111 404.4 348 62.1
PSO674G0074 Papaver somniferum HOM05D002281 ORTHO05D005599 6.5e-111 404.4 347 62.2
PSO170G6144 Papaver somniferum HOM05D002281 ORTHO05D005599 1.1e-110 403.7 347 62.2
Nitab4.5_0000494g0100 Nicotiana tabacum HOM05D002281 ORTHO05D005599 1.4e-110 403.3 348 62.4
RcHm_v2.0_Chr3g0448911 Rosa chinensis HOM05D002281 ORTHO05D005599 1.4e-110 403.3 348 62.6
Sed0017844 Sechium edule HOM05D002281 ORTHO05D005599 1.4e-110 403.3 348 62.4
Atru.chr2.1138 Acer truncatum HOM05D002281 ORTHO05D005599 1.9e-110 402.9 346 62.7
Cfa006304 Carpinus fangiana HOM05D002281 ORTHO05D005599 1.9e-110 402.9 347 63.1
EL10Ac4g09788 Beta vulgaris HOM05D002281 ORTHO05D005599 2.5e-110 402.5 345 62.0
Sopen11g008300 Solanum pennellii HOM05D002281 ORTHO05D005599 4.2e-110 401.7 345 62.6
CANSAT54G0020 Cannabis sativa HOM05D002281 ORTHO05D005599 5.5e-110 401.4 347 62.2
Glyma.03G253000 Glycine max HOM05D002281 ORTHO05D005599 5.5e-110 401.4 347 63.1
arahy.Tifrunner.gnm1.ann1.KCE1UK Arachis hypogaea HOM05D002281 ORTHO05D005599 9.3e-110 400.6 358 61.5
Glyma.19G250600 Glycine max HOM05D002281 ORTHO05D005599 1.2e-109 400.2 347 62.8
MD12G1252700 Malus domestica HOM05D002281 ORTHO05D005599 1.6e-109 399.8 348 61.5
Lsat_1_v5_gn_8_2941 Lactuca sativa HOM05D002281 ORTHO05D005599 2.1e-109 399.4 343 63.0
MSTRG.1472 Avicennia marina HOM05D002281 ORTHO05D005599 6.1e-109 397.9 347 61.7
FAN05G1240 Fragaria x ananassa HOM05D002281 ORTHO05D005599 7.9e-109 397.5 348 61.5
Phvul.006G107600 Phaseolus vulgaris HOM05D002281 ORTHO05D005599 7.9e-109 397.5 347 62.5
FAN05G1274 Fragaria x ananassa HOM05D002281 ORTHO05D005599 3.0e-108 395.6 348 61.2
Lj1g0020458 Lotus japonicus HOM05D002281 ORTHO05D005599 3.0e-108 395.6 347 62.0
Medtr7g116590 Medicago truncatula HOM05D002281 ORTHO05D005599 3.0e-108 395.6 348 61.8
Potri.013G051200 Populus trichocarpa HOM05D002281 ORTHO05D005599 3.0e-108 395.6 347 61.1
FAN14G5004 Fragaria x ananassa HOM05D002281 ORTHO05D005599 6.7e-108 394.4 349 61.0
TWI60G0078 Tripterygium wilfordii HOM05D002281 ORTHO05D005599 6.7e-108 394.4 347 60.5
Psat0s3583g0040 Pisum sativum HOM05D002281 ORTHO05D005599 8.7e-108 394.0 347 62.0
Ca_09474_v3 Cicer arietinum L. HOM05D002281 ORTHO05D005599 1.9e-107 392.9 336 63.4
VMungo0540G0745 Vigna mungo HOM05D002281 ORTHO05D005599 2.5e-107 392.5 347 61.7
FvH4_6g01330 Fragaria vesca HOM05D002281 ORTHO05D005599 3.3e-107 392.1 347 61.1
FAN09G1447 Fragaria x ananassa HOM05D002281 ORTHO05D005599 1.3e-106 390.2 348 60.9
Prupe.6G354800 Prunus persica HOM05D002281 ORTHO05D005599 3.7e-106 388.7 348 60.3
Nitab4.5_0000051g0330 Nicotiana tabacum HOM05D002281 ORTHO05D005599 1.9e-102 376.3 355 59.2
Sabra19G0034800 Salix brachista HOM05D002281 ORTHO05D005599 5.5e-102 374.8 347 59.7
Sabra19G0037800 Salix brachista HOM05D002281 ORTHO05D005599 5.5e-102 374.8 347 59.7
Sabra13G0046600 Salix brachista HOM05D002281 ORTHO05D005599 7.9e-101 370.9 292 67.8
Aa31LG11G11220 Aethionema arabicum HOM05D002281 ORTHO05D005599 5.1e-100 368.2 321 61.7
C03p10320 Brassica napus HOM05D002281 ORTHO05D005599 6.7e-100 367.9 348 58.9
A03p08830 Brassica napus HOM05D002281 ORTHO05D005599 4.4e-99 365.2 348 58.9
COL.COLO4_38179 Corchorus olitorius HOM05D002281 ORTHO05D005599 7.4e-99 364.4 207 86.0
Haze_04485 Corylus avellana HOM05D002281 ORTHO05D005599 2.4e-97 359.4 348 58.9
Cpa.g.sc51.37 Carica papaya HOM05D002281 ORTHO05D005599 1.7e-95 353.2 309 60.8
SMO348G0052 Selaginella moellendorffii HOM05D002281 ORTHO05D005599 4.2e-94 348.6 344 53.8
arahy.Tifrunner.gnm1.ann1.T4Q4MP Arachis hypogaea HOM05D002281 ORTHO05D005599 1.1e-91 340.5 349 56.4
AUR62000642 Chenopodium quinoa HOM05D002281 ORTHO05D005599 9.7e-91 337.4 369 52.6
Pp3c21_8020 Physcomitrium patens HOM05D002281 ORTHO05D005599 2.2e-90 336.3 348 51.1
Mapoly0078s0045 Marchantia polymorpha HOM05D002281 ORTHO05D005599 1.0e-87 327.4 333 52.6
SEGI_41506 Sequoiadendron giganteum HOM05D002281 ORTHO05D005599 2.9e-87 325.9 305 57.4
AagrBONN_evm.TU.Sc2ySwM_344.4016 Anthoceros agrestis HOM05D002281 ORTHO05D005599 5.0e-87 325.1 320 55.3
vmacro19963 Vaccinium macrocarpon HOM05D002281 ORTHO05D005599 1.4e-84 317.0 394 48.2
FAN14G3852 Fragaria x ananassa HOM05D002281 ORTHO05D006774 2.3e-84 316.2 205 77.1
Peaxi162Scf00285g00225 Petunia axillaris HOM05D002281 ORTHO05D005599 2.4e-81 306.2 275 59.6
Pp3c2_6040 Physcomitrium patens HOM05D002281 ORTHO05D005599 5.9e-80 301.6 207 68.6
SGA_v2.0_scaffold52G18996 Striga asiatica HOM05D002281 ORTHO05D005599 1.0e-79 300.8 274 58.8
Hund07164 Selenicereus undatus HOM05D002281 ORTHO05D005599 1.4e-76 290.4 274 56.9
DCAR_005525 Daucus carota HOM05D002281 ORTHO05D005599 6.8e-68 261.5 254 56.3
Haze_04492 Corylus avellana HOM05D002281 ORTHO05D005599 4.4e-67 258.8 264 56.1
Hma1.2p1_0153F.1_g067900 Hydrangea macrophylla HOM05D002281 ORTHO05D005599 5.7e-67 258.5 154 83.8
Lj2A49T37 Lonicera japonica HOM05D002281 ORTHO05D005599 5.4e-65 251.9 249 55.4
Ah.06g188770 Amaranthus hybridus HOM05D002281 ORTHO05D005599 7.5e-59 231.5 135 83.7
arahy.Tifrunner.gnm1.ann1.I7KFZB Arachis hypogaea HOM05D002281 ORTHO05D005599 9.8e-59 231.1 177 67.8
SHI14430 Sapria himalayana HOM05D002281 ORTHO05D005599 5.0e-55 218.8 265 46.8
CBR_g23328 Chara braunii HOM05D002281 ORTHO05D005599 6.6e-55 218.4 332 38.0
Cc10_g10600 Coffea canephora HOM05D002281 ORTHO05D005599 2.0e-51 206.8 130 79.2
Cc10_g10590 Coffea canephora HOM05D002281 ORTHO05D005599 3.7e-50 202.6 219 51.6
BraA03t10210Z Brassica rapa HOM05D002281 ORTHO05D005599 5.1e-39 165.6 123 69.1
HPP92_013019 Vanilla planifolia HOM05D002281 ORTHO05D005599 1.5e-38 164.1 78 100.0
FAN14G5351 Fragaria x ananassa HOM05D002281 ORTHO05D006774 8.4e-34 148.3 131 61.1
A03p08860 Brassica napus HOM05D002281 ORTHO05D005599 7.1e-33 145.2 123 61.8
unitig_736.g22260 Utricularia gibba HOM05D002281 ORTHO05D005599 1.1e-30 137.9 184 47.3
SHI14427 Sapria himalayana HOM05D000030 ORTHO05D000009 2.3e-23 113.6 112 53.6
Hma1.2p1_0153F.1_g067920 Hydrangea macrophylla HOM05D002281 ORTHO05D005599 1.9e-17 94.0 164 37.2
arahy.Tifrunner.gnm1.ann1.57298L Arachis hypogaea HOM05D002281 ORTHO05D005599 3.5e-16 89.7 104 49.0
Ah.06g188760 Amaranthus hybridus HOM05D002281 ORTHO05D006774 5.5e-09 65.9 142 33.1
QL06p040095 Quercus lobata HOM05D002281 ORTHO05D005599 3.5e-08 63.2 77 48.1


User provided reference genes

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