Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_012970 Vanilla planifolia HOM05D006344 ORTHO05D007744 1.8e-295 1018.5 495 100.0
Nn1g00813 Nelumbo nucifera HOM05D006344 ORTHO05D007744 4.7e-163 578.6 514 59.9
Zm00001eb427880 Zea mays HOM05D006344 ORTHO05D007744 5.4e-159 565.1 431 65.9
QL04p029920 Quercus lobata HOM05D006344 ORTHO05D007744 2.8e-155 552.7 494 57.7
Glyma.12G152700 Glycine max HOM05D006344 ORTHO05D007744 8.1e-155 551.2 447 61.1
Manes.05G055800 Manihot esculenta HOM05D006344 ORTHO05D007744 3.4e-153 545.8 429 62.9
Phvul.010G046700 Phaseolus vulgaris HOM05D006344 ORTHO05D007744 4.4e-153 545.4 440 61.1
VMungo0331G0733 Vigna mungo HOM05D006344 ORTHO05D007744 4.4e-153 545.4 426 61.3
Lj3g0017960 Lotus japonicus HOM05D006344 ORTHO05D007744 7.5e-153 544.7 473 58.4
arahy.Tifrunner.gnm1.ann1.7K9T15 Arachis hypogaea HOM05D006344 ORTHO05D007744 9.9e-153 544.3 468 59.0
arahy.Tifrunner.gnm1.ann1.6KIV37 Arachis hypogaea HOM05D006344 ORTHO05D007744 1.7e-152 543.5 468 58.8
Cc02_g25170 Coffea canephora HOM05D006344 ORTHO05D007744 2.2e-152 543.1 458 58.7
ATR0665G564 Amborella trichopoda HOM05D006344 ORTHO05D007744 2.9e-152 542.7 455 60.9
vmacro13505 Vaccinium macrocarpon HOM05D006344 ORTHO05D007744 8.3e-152 541.2 471 60.1
Prupe.2G133500 Prunus persica HOM05D006344 ORTHO05D007744 1.1e-151 540.8 446 63.0
Aqoxy3G02683 Aquilegia oxysepala HOM05D006344 ORTHO05D007744 1.4e-151 540.4 462 60.4
MSTRG.20684 Avicennia marina HOM05D006344 ORTHO05D007744 1.4e-151 540.4 454 59.9
THA.LOC104802498 Tarenaya hassleriana HOM05D006344 ORTHO05D007744 9.2e-151 537.7 471 57.3
Thecc.01G396400 Theobroma cacao HOM05D006344 ORTHO05D007744 1.2e-150 537.3 458 61.1
Duzib138G0679 Durio zibethinus HOM05D006344 ORTHO05D007744 2.1e-150 536.6 445 61.3
CSS0047635 Camellia sinensis var. sinensis HOM05D006344 ORTHO05D007744 3.5e-150 535.8 434 63.4
Ciclev10019814m.g Citrus clementina HOM05D006344 ORTHO05D007744 3.5e-150 535.8 430 61.9
Os04g0545200 Oryza sativa ssp. japonica HOM05D006344 ORTHO05D007744 6.0e-150 535.0 442 60.6
TPR.G32142 Trifolium pratense HOM05D006344 ORTHO05D007744 6.0e-150 535.0 491 56.2
PSO782G2130 Papaver somniferum HOM05D006344 ORTHO05D007744 2.3e-149 533.1 503 55.5
SGA_v2.0_scaffold52G19234 Striga asiatica HOM05D006344 ORTHO05D007744 2.3e-149 533.1 431 61.0
MD07G1109900 Malus domestica HOM05D006344 ORTHO05D007744 6.6e-149 531.6 436 62.4
Sc26g0001660 Simmondsia chinensis HOM05D006344 ORTHO05D007744 1.5e-148 530.4 430 62.3
CSS0005629 Camellia sinensis var. sinensis HOM05D006344 ORTHO05D007744 1.9e-148 530.0 434 62.7
Glyma.06G240000 Glycine max HOM05D006344 ORTHO05D007744 1.9e-148 530.0 447 59.3
Gohir.A12G097600 Gossypium hirsutum HOM05D006344 ORTHO05D007744 1.9e-148 530.0 429 62.5
TAR375G1150 Trochodendron aralioides HOM05D006344 ORTHO05D007744 2.5e-148 529.6 509 56.8
Cfa011061 Carpinus fangiana HOM05D006344 ORTHO05D007744 4.3e-148 528.9 435 63.0
Duzib133G0621 Durio zibethinus HOM05D006344 ORTHO05D007744 9.5e-148 527.7 437 62.5
EL10Ac1g00751 Beta vulgaris HOM05D006344 ORTHO05D007744 1.2e-147 527.3 434 59.4
Gohir.D12G100600 Gossypium hirsutum HOM05D006344 ORTHO05D007744 1.2e-147 527.3 429 62.2
CANSAT25G2006 Cannabis sativa HOM05D006344 ORTHO05D007744 2.1e-147 526.6 483 57.8
MELO3C005945.2 Cucumis melo HOM05D006344 ORTHO05D007744 2.1e-147 526.6 430 61.9
Migut.B01523 Erythranthe guttata HOM05D006344 ORTHO05D007744 2.1e-147 526.6 432 60.4
FAN06G2435 Fragaria x ananassa HOM05D006344 ORTHO05D007744 2.1e-147 526.6 455 59.1
Eucgr.D01222 Eucalyptus grandis HOM05D006344 ORTHO05D007744 2.8e-147 526.2 428 59.6
Lalb_Chr12g0210531 Lupinus albus HOM05D006344 ORTHO05D007744 2.8e-147 526.2 457 57.3
FAN10G0415 Fragaria x ananassa HOM05D006344 ORTHO05D007744 4.7e-147 525.4 455 59.1
Potri.002G138600 Populus trichocarpa HOM05D006344 ORTHO05D007744 4.7e-147 525.4 438 60.3
FAN06G3766 Fragaria x ananassa HOM05D006344 ORTHO05D007744 6.2e-147 525.0 457 59.5
FAN10G1159 Fragaria x ananassa HOM05D006344 ORTHO05D007744 6.2e-147 525.0 455 59.1
Haze_02860 Corylus avellana HOM05D006344 ORTHO05D007744 1.1e-146 524.2 436 61.9
FvH4_7g10380 Fragaria vesca HOM05D006344 ORTHO05D007744 1.8e-146 523.5 457 59.3
RcHm_v2.0_Chr1g0348081 Rosa chinensis HOM05D006344 ORTHO05D007744 2.4e-146 523.1 433 60.3
Sabra02G0107400 Salix brachista HOM05D006344 ORTHO05D007744 3.1e-146 522.7 458 58.7
AUR62013752 Chenopodium quinoa HOM05D006344 ORTHO05D007744 4.0e-146 522.3 435 60.7
ECA234G3853 Erigeron canadensis HOM05D006344 ORTHO05D007744 5.2e-146 521.9 441 59.9
Hund17097 Selenicereus undatus HOM05D006344 ORTHO05D007744 6.8e-146 521.5 441 59.4
Medtr8g007155 Medicago truncatula HOM05D006344 ORTHO05D007744 1.2e-145 520.8 448 59.6
TWI23G1150 Tripterygium wilfordii HOM05D006344 ORTHO05D007744 2.6e-145 519.6 450 59.6
Gorai.008G109500 Gossypium raimondii HOM05D006344 ORTHO05D007744 3.4e-145 519.2 429 60.6
Oeu011251.1 Olea europaea HOM05D006344 ORTHO05D007744 3.4e-145 519.2 471 56.3
A05p04940 Brassica napus HOM05D006344 ORTHO05D007744 4.4e-145 518.8 427 61.4
Thhalv10001417m.g Eutrema salsugineum HOM05D006344 ORTHO05D007744 4.4e-145 518.8 451 59.9
CARHR139980 Cardamine hirsuta HOM05D006344 ORTHO05D007744 5.8e-145 518.5 450 58.7
FAN01G1631 Fragaria x ananassa HOM05D006344 ORTHO05D007744 5.8e-145 518.5 449 59.0
unitig_0.g1343 Utricularia gibba HOM05D006344 ORTHO05D007744 9.9e-145 517.7 466 57.1
AUR62023399 Chenopodium quinoa HOM05D006344 ORTHO05D007744 1.7e-144 516.9 427 58.8
Psat4g223640 Pisum sativum HOM05D006344 ORTHO05D007744 2.9e-144 516.2 433 59.4
Sopen10g011810 Solanum pennellii HOM05D006344 ORTHO05D007744 3.8e-144 515.8 460 57.6
Ca_14805_v3 Cicer arietinum L. HOM05D006344 ORTHO05D007744 4.9e-144 515.4 433 59.8
SalBow8G3479 Salvia bowleyana HOM05D006344 ORTHO05D007744 1.4e-143 513.8 454 57.0
Sp4g26830 Schrenkiella parvula HOM05D006344 ORTHO05D007744 2.4e-143 513.1 457 58.4
BraA05t19467Z Brassica rapa HOM05D006344 ORTHO05D007744 4.1e-143 512.3 426 60.8
HanXRQChr17g0562521 Helianthus annuus HOM05D006344 ORTHO05D007744 1.6e-142 510.4 442 58.4
AL4G43840 Arabidopsis lyrata HOM05D006344 ORTHO05D007744 3.5e-142 509.2 459 58.8
BcaB02g08857 Brassica carinata HOM05D006344 ORTHO05D007744 3.5e-142 509.2 461 56.8
C04p05760 Brassica napus HOM05D006344 ORTHO05D007744 3.0e-141 506.1 428 60.3
FAN03G0097 Fragaria x ananassa HOM05D006344 ORTHO05D007744 1.1e-140 504.2 504 53.2
GSVIVG01018294001 Vitis vinifera HOM05D006344 ORTHO05D007744 1.1e-140 504.2 385 64.2
AT2G44760 Arabidopsis thaliana HOM05D006344 ORTHO05D007744 4.3e-140 502.3 456 58.1
BcaC02g12272 Brassica carinata HOM05D006344 ORTHO05D007744 5.6e-140 501.9 427 59.5
BolC4t22205H Brassica oleracea HOM05D006344 ORTHO05D007744 5.6e-140 501.9 427 59.5
Lsat_1_v5_gn_4_39300 Lactuca sativa HOM05D006344 ORTHO05D007744 5.6e-140 501.9 439 58.3
Dinv44052 Davidia involucrata HOM05D006344 ORTHO05D007744 9.6e-140 501.1 379 64.6
CiPaw.14G019800 Carya illinoinensis HOM05D006344 ORTHO05D007744 2.4e-138 496.5 436 59.2
Nitab4.5_0000228g0070 Nicotiana tabacum HOM05D006344 ORTHO05D007744 6.9e-138 495.0 479 54.5
Aa31LG1G26310 Aethionema arabicum HOM05D006344 ORTHO05D007744 9.0e-138 494.6 485 55.1
CDE06G1994 Ceratophyllum demersum HOM05D006344 ORTHO05D007744 1.5e-137 493.8 431 59.2
Carub.0004s2733 Capsella rubella HOM05D006344 ORTHO05D007744 2.2e-136 490.0 456 55.7
Rhsim07G0037100 Rhododendron simsii HOM05D006344 ORTHO05D007744 8.4e-136 488.0 472 55.5
DCAR_025059 Daucus carota HOM05D006344 ORTHO05D007744 1.3e-133 480.7 444 55.9
COL.COLO4_12394 Corchorus olitorius HOM05D006344 ORTHO05D007744 3.0e-133 479.6 369 62.6
ClCG05G000130 Citrullus lanatus HOM05D006344 ORTHO05D007744 1.6e-131 473.8 430 57.2
Sed0012570 Sechium edule HOM05D006344 ORTHO05D007744 1.4e-130 470.7 443 54.9
COL.COLO4_10415 Corchorus olitorius HOM05D006344 ORTHO05D007744 6.0e-126 455.3 412 57.0
PGR004G1920 Punica granatum HOM05D006344 ORTHO05D007744 6.7e-125 451.8 435 54.9
Actinidia18353 Actinidia chinensis HOM05D006344 ORTHO05D007744 1.3e-123 447.6 418 57.2
CsaV3_3G007240 Cucumis sativus L. HOM05D006344 ORTHO05D007744 2.6e-121 439.9 625 42.1
Cpa.g.sc22.25 Carica papaya HOM05D006344 ORTHO05D007744 2.4e-119 433.3 386 58.3
Lj9C555G1 Lonicera japonica HOM05D006344 ORTHO05D007744 1.9e-100 370.5 250 68.0
Nitab4.5_0009461g0020 Nicotiana tabacum HOM05D006344 ORTHO05D007744 4.5e-97 359.4 335 54.6
Atru.chr5.116 Acer truncatum HOM05D006344 ORTHO05D007744 1.2e-81 308.1 241 62.7
Peaxi162Scf00103g00911 Petunia axillaris HOM05D006344 ORTHO05D007744 7.0e-74 282.3 191 67.5
SEGI_37248 Sequoiadendron giganteum HOM05D006344 ORTHO05D007744 1.1e-71 275.0 223 58.7
Peaxi162Scf00103g00912 Petunia axillaris HOM05D006344 ORTHO05D007744 3.7e-67 260.0 255 52.9
Pp3c5_3810 Physcomitrium patens HOM05D006344 ORTHO05D007744 3.1e-66 256.9 478 33.9
PGSC0003DMG400026373 Solanum tuberosum HOM05D006344 ORTHO05D007744 1.2e-65 255.0 258 52.7
Solyc10g037900.1 Solanum lycopersicum HOM05D006344 ORTHO05D007744 5.5e-63 246.1 263 51.0
Solyc10g037890.3 Solanum lycopersicum HOM05D006344 ORTHO05D007744 7.2e-63 245.7 181 64.6
CAN.G768.2 Capsicum annuum HOM05D006344 ORTHO05D007744 2.8e-62 243.8 269 49.1
PGSC0003DMG400003447 Solanum tuberosum HOM05D006344 ORTHO05D007744 1.0e-53 215.3 161 62.7
AagrBONN_evm.TU.Sc2ySwM_117.1538 Anthoceros agrestis HOM05D006344 ORTHO05D007744 8.9e-53 212.2 600 27.0
Mapoly0089s0048 Marchantia polymorpha HOM05D006344 ORTHO05D007744 1.2e-52 211.8 592 29.4
SMO340G0133 Selaginella moellendorffii HOM05D002542 ORTHO05D007744 1.6e-49 201.4 444 30.4
Atru.chr5.115 Acer truncatum HOM05D006344 ORTHO05D007744 7.3e-39 166.0 190 50.5
Lj9A555T32 Lonicera japonica HOM05D006344 ORTHO05D007744 1.5e-36 158.3 122 66.4
SMO356G0573 Selaginella moellendorffii HOM05D002542 ORTHO05D005078 2.2e-35 154.5 360 30.0
SEGI_14599 Sequoiadendron giganteum HOM05D006344 ORTHO05D007744 2.7e-33 147.5 178 46.6
SEGI_30390 Sequoiadendron giganteum HOM05D006344 ORTHO05D007744 4.3e-23 113.6 99 56.6
Actinidia26517 Actinidia chinensis HOM05D006344 ORTHO05D007744 1.3e-19 102.1 60 73.3
HanXRQChr09g0257941 Helianthus annuus HOM05D006344 ORTHO05D007744 2.4e-18 97.8 106 48.1
CDE06G0422 Ceratophyllum demersum HOM05D006344 ORTHO05D007744 6.6e-16 89.7 56 69.6
CBR_g48168 Chara braunii HOM05D006344 ORTHO05D007744 5.6e-15 86.7 156 34.6
Peaxi162Scf00562g00611 Petunia axillaris HOM05D006344 ORTHO05D007744 4.2e-10 70.5 73 53.4
BcaB08g35012 Brassica carinata HOM05D006344 ORTHO05D007744 7.9e-09 66.2 54 55.6
Peaxi162Scf00562g00069 Petunia axillaris HOM05D006344 ORTHO05D007744 6.7e-08 63.2 131 31.3
CBR_g48169 Chara braunii HOM05D006344 ORTHO05D007744 1.3e-06 58.9 65 38.5
HanXRQChr01g0015371 Helianthus annuus HOM05D000263 ORTHO05D000213 2.8e-06 57.8 41 61.0


User provided reference genes

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