Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_012949 Vanilla planifolia HOM05D006047 ORTHO05D007353 1.6e-109 399.4 200 100.0
Nn6g31863 Nelumbo nucifera HOM05D006047 ORTHO05D007353 5.4e-41 171.8 153 66.0
Aqoxy1G03282 Aquilegia oxysepala HOM05D006047 ORTHO05D007353 4.5e-40 168.7 151 64.2
MBI16_g27295_MAGBIO Magnolia biondii HOM05D006047 ORTHO05D007353 3.8e-39 165.6 147 63.3
Hma1.2p1_0163F.1_g072560 Hydrangea macrophylla HOM05D006047 ORTHO05D007353 1.5e-38 163.7 151 62.3
TAR625G1286 Trochodendron aralioides HOM05D006047 ORTHO05D007353 2.5e-38 162.9 154 60.4
TAR625G1483 Trochodendron aralioides HOM05D006047 ORTHO05D007353 2.5e-38 162.9 154 60.4
Aqoxy3G00951 Aquilegia oxysepala HOM05D006047 ORTHO05D007353 1.6e-37 160.2 151 60.9
COL.COLO4_17357 Corchorus olitorius HOM05D006047 ORTHO05D007353 3.6e-37 159.1 151 60.3
Thecc.02G058000 Theobroma cacao HOM05D006047 ORTHO05D007353 6.1e-37 158.3 147 58.5
EL10Ac9g21359 Beta vulgaris HOM05D006047 ORTHO05D007353 8.0e-37 157.9 151 60.3
CiPaw.06G121100 Carya illinoinensis HOM05D006047 ORTHO05D007353 8.0e-37 157.9 147 59.2
Manes.11G097000 Manihot esculenta HOM05D006047 ORTHO05D007353 8.0e-37 157.9 152 59.2
Gohir.A01G002200 Gossypium hirsutum HOM05D006047 ORTHO05D007353 1.0e-36 157.5 150 62.7
CiPaw.05G083500 Carya illinoinensis HOM05D006047 ORTHO05D007353 1.4e-36 157.1 147 59.9
PSO063G4836 Papaver somniferum HOM05D006047 ORTHO05D007353 1.4e-36 157.1 158 57.6
Sed0015003 Sechium edule HOM05D006047 ORTHO05D007353 1.4e-36 157.1 157 61.1
PGR042G1307 Punica granatum HOM05D006047 ORTHO05D007353 1.8e-36 156.8 164 56.1
AUR62013019 Chenopodium quinoa HOM05D006047 ORTHO05D007353 2.3e-36 156.4 151 60.3
Dinv41931 Davidia involucrata HOM05D006047 ORTHO05D007353 3.0e-36 156.0 152 60.5
Sc08g0002850 Simmondsia chinensis HOM05D006047 ORTHO05D007353 3.0e-36 156.0 149 61.1
GSVIVG01024006001 Vitis vinifera HOM05D006047 ORTHO05D007353 3.0e-36 156.0 147 62.6
AUR62010029 Chenopodium quinoa HOM05D006047 ORTHO05D007353 4.0e-36 155.6 151 60.9
Rhsim05G0054100 Rhododendron simsii HOM05D006047 ORTHO05D007353 4.0e-36 155.6 153 59.5
Potri.009G136100 Populus trichocarpa HOM05D006047 ORTHO05D007353 5.2e-36 155.2 150 56.7
Sopen01g053710 Solanum pennellii HOM05D006047 ORTHO05D007353 5.2e-36 155.2 148 60.1
Gohir.D01G001800 Gossypium hirsutum HOM05D006047 ORTHO05D007353 6.8e-36 154.8 146 61.6
PGSC0003DMG400006182 Solanum tuberosum HOM05D006047 ORTHO05D007353 6.8e-36 154.8 150 58.0
CANSAT21G1105 Cannabis sativa HOM05D006047 ORTHO05D007353 8.9e-36 154.5 158 60.8
Eucgr.G01785 Eucalyptus grandis HOM05D006047 ORTHO05D007353 8.9e-36 154.5 159 58.5
Solyc01g111670.4 Solanum lycopersicum HOM05D006047 ORTHO05D007353 8.9e-36 154.5 148 60.1
Cpa.g.sc20.97 Carica papaya HOM05D006047 ORTHO05D007353 1.2e-35 154.1 152 55.3
PSO782G4934 Papaver somniferum HOM05D006047 ORTHO05D007353 1.2e-35 154.1 158 58.2
vmacro17314 Vaccinium macrocarpon HOM05D006047 ORTHO05D007353 1.2e-35 154.1 148 59.5
MD05G1123100 Malus domestica HOM05D006047 ORTHO05D007353 1.5e-35 153.7 151 58.9
ATR0064G037 Amborella trichopoda HOM05D006047 ORTHO05D007353 2.0e-35 153.3 151 57.6
Cfa005258 Carpinus fangiana HOM05D006047 ORTHO05D007353 2.0e-35 153.3 151 58.9
Gorai.002G002400 Gossypium raimondii HOM05D006047 ORTHO05D007353 2.0e-35 153.3 146 62.3
Ciclev10029458m.g Citrus clementina HOM05D006047 ORTHO05D007353 3.4e-35 152.5 160 56.2
Peaxi162Scf00362g00511 Petunia axillaris HOM05D006047 ORTHO05D007353 3.4e-35 152.5 147 59.9
DCAR_003178 Daucus carota HOM05D006047 ORTHO05D007353 4.4e-35 152.1 148 59.5
Duzib132G0293 Durio zibethinus HOM05D006047 ORTHO05D007353 4.4e-35 152.1 151 60.3
MD10G1125900 Malus domestica HOM05D006047 ORTHO05D007353 7.5e-35 151.4 153 56.9
Lsat_1_v5_gn_4_71821 Lactuca sativa HOM05D006047 ORTHO05D007353 9.8e-35 151.0 147 60.5
Zm00001eb331780 Zea mays HOM05D006047 ORTHO05D007353 9.8e-35 151.0 157 57.3
vmacro17313 Vaccinium macrocarpon HOM05D006047 ORTHO05D007353 1.3e-34 150.6 147 59.2
Ca_08043_v3 Cicer arietinum L. HOM05D006047 ORTHO05D007353 2.2e-34 149.8 147 59.9
Glyma.18G247500 Glycine max HOM05D006047 ORTHO05D007353 2.2e-34 149.8 148 60.8
Prupe.8G167000 Prunus persica HOM05D006047 ORTHO05D007353 2.2e-34 149.8 149 58.4
MELO3C020826.2 Cucumis melo HOM05D006047 ORTHO05D007353 2.9e-34 149.4 147 56.5
Migut.N01327 Erythranthe guttata HOM05D006047 ORTHO05D007353 2.9e-34 149.4 148 54.7
ClCG02G012010 Citrullus lanatus HOM05D006047 ORTHO05D007353 3.7e-34 149.1 154 53.9
CSS0000109 Camellia sinensis var. sinensis HOM05D006047 ORTHO05D007353 4.9e-34 148.7 149 57.7
SGA_v2.0_scaffold207G41930 Striga asiatica HOM05D006047 ORTHO05D007353 4.9e-34 148.7 148 58.8
TPR.G32107 Trifolium pratense HOM05D006047 ORTHO05D007353 6.4e-34 148.3 148 58.1
Lj1g0011713 Lotus japonicus HOM05D006047 ORTHO05D007353 1.1e-33 147.5 147 57.8
Lalb_Chr01g0021661 Lupinus albus HOM05D006047 ORTHO05D007353 1.1e-33 147.5 147 55.1
Atru.chr5.3378 Acer truncatum HOM05D006047 ORTHO05D007353 1.4e-33 147.1 154 55.8
RcHm_v2.0_Chr6g0278481 Rosa chinensis HOM05D006047 ORTHO05D007353 1.4e-33 147.1 147 57.1
FvH4_2g15480 Fragaria vesca HOM05D006047 ORTHO05D007353 2.4e-33 146.4 150 55.3
FAN24G2638 Fragaria x ananassa HOM05D006047 ORTHO05D007353 2.4e-33 146.4 150 55.3
HanXRQChr12g0374651 Helianthus annuus HOM05D006047 ORTHO05D007353 2.4e-33 146.4 146 61.0
CsaV3_2G016180 Cucumis sativus L. HOM05D006047 ORTHO05D007353 5.4e-33 145.2 147 54.4
Gohir.D02G226700 Gossypium hirsutum HOM05D006047 ORTHO05D007353 5.4e-33 145.2 149 56.4
Gorai.005G254600 Gossypium raimondii HOM05D006047 ORTHO05D007353 5.4e-33 145.2 149 56.4
unitig_52.g17373 Utricularia gibba HOM05D006047 ORTHO05D007353 5.4e-33 145.2 151 54.3
Glyma.09G245500 Glycine max HOM05D006047 ORTHO05D007353 7.0e-33 144.8 151 58.9
Medtr7g081070 Medicago truncatula HOM05D006047 ORTHO05D007353 7.0e-33 144.8 147 53.7
Phvul.008G049800 Phaseolus vulgaris HOM05D006047 ORTHO05D007353 7.0e-33 144.8 147 56.5
Ah.01g023100 Amaranthus hybridus HOM05D006047 ORTHO05D007353 9.2e-33 144.4 147 55.8
Cc09_g09850 Coffea canephora HOM05D006047 ORTHO05D007353 9.2e-33 144.4 147 54.4
FAN20G3211 Fragaria x ananassa HOM05D006047 ORTHO05D007353 9.2e-33 144.4 150 54.7
Gohir.A03G205400 Gossypium hirsutum HOM05D006047 ORTHO05D007353 1.2e-32 144.1 153 55.6
Sabra09G0105700 Salix brachista HOM05D006047 ORTHO05D007353 1.2e-32 144.1 141 56.7
Sed0000957 Sechium edule HOM05D006047 ORTHO05D007353 1.2e-32 144.1 155 56.1
FAN15G3104 Fragaria x ananassa HOM05D006047 ORTHO05D007353 1.6e-32 143.7 149 55.0
FAN27G2596 Fragaria x ananassa HOM05D001601 ORTHO05D002628 1.6e-32 143.7 147 55.1
Psat3g100240 Pisum sativum HOM05D006047 ORTHO05D007353 1.6e-32 143.7 147 57.1
VMungo1383G0342 Vigna mungo HOM05D006047 ORTHO05D007353 1.6e-32 143.7 147 58.5
Lalb_Chr19g0126421 Lupinus albus HOM05D006047 ORTHO05D007353 2.0e-32 143.3 147 55.8
HanXRQChr10g0300821 Helianthus annuus HOM05D006047 ORTHO05D007353 2.7e-32 142.9 147 56.5
Haze_02125 Corylus avellana HOM05D006047 ORTHO05D007353 3.5e-32 142.5 154 55.2
SGA_v2.0_scaffold80G25840 Striga asiatica HOM05D006047 ORTHO05D007353 4.6e-32 142.1 150 55.3
CDE02G0256 Ceratophyllum demersum HOM05D006047 ORTHO05D007353 7.8e-32 141.4 146 56.2
Zm00001eb103880 Zea mays HOM05D006047 ORTHO05D007353 7.8e-32 141.4 150 54.7
Sopen11g024350 Solanum pennellii HOM05D006047 ORTHO05D007353 1.3e-31 140.6 148 56.1
ECA234G0646 Erigeron canadensis HOM05D006047 ORTHO05D000476 1.7e-31 140.2 143 60.1
Actinidia39157 Actinidia chinensis HOM05D006047 ORTHO05D007353 3.9e-31 139.0 137 60.6
CSS0028471 Camellia sinensis var. sinensis HOM05D006047 ORTHO05D007353 3.9e-31 139.0 144 54.9
Actinidia32040 Actinidia chinensis HOM05D006047 ORTHO05D007353 6.6e-31 138.3 138 60.1
Aa31LG6G16610 Aethionema arabicum HOM05D006047 ORTHO05D007353 6.6e-31 138.3 145 55.9
SHI05754 Sapria himalayana HOM05D006047 ORTHO05D007353 6.6e-31 138.3 148 52.7
Lsat_1_v5_gn_8_123180 Lactuca sativa HOM05D006047 ORTHO05D007353 1.9e-30 136.7 139 60.4
Actinidia21466 Actinidia chinensis HOM05D006047 ORTHO05D007353 4.7e-29 132.1 137 57.7
AT2G20940 Arabidopsis thaliana HOM05D006047 ORTHO05D007353 4.7e-29 132.1 149 52.3
QL11p050986 Quercus lobata HOM05D006047 ORTHO05D007353 6.2e-29 131.7 139 53.2
Solyc03g044590.2 Solanum lycopersicum HOM05D006047 ORTHO05D007353 1.8e-28 130.2 147 53.7
Carub.0004s0003 Capsella rubella HOM05D006047 ORTHO05D007353 2.3e-28 129.8 149 51.7
Sp4g00130 Schrenkiella parvula HOM05D006047 ORTHO05D007353 3.1e-28 129.4 151 50.3
AL4G10070 Arabidopsis lyrata HOM05D006047 ORTHO05D007353 4.0e-28 129.0 149 51.7
Duzib248G0446 Durio zibethinus HOM05D006047 ORTHO05D007353 5.2e-28 128.6 148 52.7
THA.LOC104824759 Tarenaya hassleriana HOM05D006047 ORTHO05D007353 6.8e-28 128.3 146 50.0
CARHR174220 Cardamine hirsuta HOM05D006047 ORTHO05D007353 1.5e-27 127.1 149 51.0
Thhalv10000376m.g Eutrema salsugineum HOM05D006047 ORTHO05D007353 1.5e-27 127.1 146 49.3
BcaB06g27764 Brassica carinata HOM05D006047 ORTHO05D007353 4.9e-26 122.1 147 48.3
A04p15840 Brassica napus HOM05D006047 ORTHO05D007353 1.1e-25 120.9 147 46.9
C04p50240 Brassica napus HOM05D006047 ORTHO05D007353 1.1e-25 120.9 147 46.9
BolC4t26624H Brassica oleracea HOM05D006047 ORTHO05D007353 1.1e-25 120.9 147 46.9
BraA04t17215Z Brassica rapa HOM05D006047 ORTHO05D007353 1.1e-25 120.9 147 46.9
AagrBONN_evm.TU.Sc2ySwM_362.1962 Anthoceros agrestis HOM05D006047 ORTHO05D007353 2.7e-24 116.3 148 48.6
Nitab4.5_0000283g0480 Nicotiana tabacum HOM05D006047 ORTHO05D007353 4.6e-24 115.5 151 45.0
TWI31G0769 Tripterygium wilfordii HOM05D006047 ORTHO05D007353 6.0e-24 115.2 141 47.5
CDE04G1108 Ceratophyllum demersum HOM05D006047 ORTHO05D007353 3.9e-23 112.5 127 53.5
Pp3c24_20200 Physcomitrium patens HOM05D006047 ORTHO05D007353 4.3e-22 109.0 144 44.4
SMO367G0473 Selaginella moellendorffii HOM05D006047 ORTHO05D007353 9.5e-22 107.8 147 44.2
BcaB01g02958 Brassica carinata HOM05D006047 ORTHO05D007353 8.9e-20 101.3 149 42.3
MD05G1195600 Malus domestica HOM05D006047 ORTHO05D007353 8.9e-20 101.3 131 45.8
Nitab4.5_0003914g0120 Nicotiana tabacum HOM05D006047 ORTHO05D007353 2.6e-19 99.8 126 44.4
Sopen11g011060 Solanum pennellii HOM05D011435 ORTHO05D012656 2.6e-19 99.8 138 47.8
SEGI_27161 Sequoiadendron giganteum HOM05D006047 ORTHO05D007353 3.7e-18 95.9 123 49.6
Mapoly0036s0025 Marchantia polymorpha HOM05D006047 ORTHO05D007353 4.1e-17 92.4 142 41.5
PGR083G0073 Punica granatum HOM05D006047 ORTHO05D007353 1.9e-14 83.6 147 38.8
Sed0021144 Sechium edule HOM05D006047 ORTHO05D007353 1.8e-12 77.0 74 59.5
HPP92_025899 Vanilla planifolia HOM05D006047 ORTHO05D007353 2.4e-12 76.6 61 59.0
CAN.G588.87 Capsicum annuum HOM05D006047 ORTHO05D007353 8.9e-12 74.7 69 56.5
Sed0002860 Sechium edule HOM05D006047 ORTHO05D007353 8.9e-12 74.7 68 63.2
SalBow5G2603 Salvia bowleyana HOM05D006047 ORTHO05D007353 1.9e-09 67.0 118 38.1
TAR624G0128 Trochodendron aralioides HOM05D006047 ORTHO05D007353 4.1e-09 65.9 53 64.2
BcaC01g04858 Brassica carinata HOM05D006047 ORTHO05D007353 5.4e-09 65.5 148 31.1
Zm00001eb046330 Zea mays HOM05D001486 ORTHO05D036446 1.6e-08 63.9 59 57.6
Zm00001eb181930 Zea mays HOM05D001107 ORTHO05D007353 1.9e-06 57.0 48 64.6


User provided reference genes

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