Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_012783 Vanilla planifolia HOM05D005852 ORTHO05D006688 1.3e-109 399.8 209 100.0
Zm00001eb333730 Zea mays HOM05D005852 ORTHO05D006688 1.8e-18 97.1 91 57.1
Os01g0252900 Oryza sativa ssp. japonica HOM05D005852 ORTHO05D006688 1.1e-17 94.4 91 57.1
CDE02G4238 Ceratophyllum demersum HOM05D005852 ORTHO05D006688 1.8e-15 87.0 95 56.8
ATR0693G434 Amborella trichopoda HOM05D005852 ORTHO05D006688 4.5e-14 82.4 95 54.7
MBI18_g35540_MAGBIO Magnolia biondii HOM05D005852 ORTHO05D006688 2.5e-12 76.6 95 50.5
CSS0026378 Camellia sinensis var. sinensis HOM05D005852 ORTHO05D006688 4.2e-12 75.9 91 52.7
Dinv33136 Davidia involucrata HOM05D005852 ORTHO05D006688 4.2e-12 75.9 93 52.7
Glyma.03G221000 Glycine max HOM05D005852 ORTHO05D006688 4.2e-12 75.9 91 52.7
TAR362G0299 Trochodendron aralioides HOM05D005852 ORTHO05D006688 4.2e-12 75.9 91 54.9
QL12p019002 Quercus lobata HOM05D005852 ORTHO05D006688 5.5e-12 75.5 91 53.8
Glyma.19G218000 Glycine max HOM05D005852 ORTHO05D006688 1.2e-11 74.3 91 50.5
CSS0024762 Camellia sinensis var. sinensis HOM05D005852 ORTHO05D006688 4.6e-11 72.4 91 51.6
Phvul.001G214600 Phaseolus vulgaris HOM05D005852 ORTHO05D006688 4.6e-11 72.4 91 51.6
Lalb_Chr18g0046571 Lupinus albus HOM05D005852 ORTHO05D006688 6.1e-11 72.0 91 48.4
Mapoly0068s0092 Marchantia polymorpha HOM05D005852 ORTHO05D006688 6.1e-11 72.0 98 42.9
VMungo1383G3312 Vigna mungo HOM05D005852 ORTHO05D006688 6.1e-11 72.0 91 51.6
CANSAT25G1874 Cannabis sativa HOM05D005852 ORTHO05D006688 1.0e-10 71.2 91 50.5
Nn4g25538 Nelumbo nucifera HOM05D005852 ORTHO05D006688 1.3e-10 70.9 91 51.6
Thecc.01G317000 Theobroma cacao HOM05D005852 ORTHO05D006688 1.3e-10 70.9 91 50.5
MD17G1278200 Malus domestica HOM05D005852 ORTHO05D006688 1.8e-10 70.5 92 50.0
arahy.Tifrunner.gnm1.ann1.8ZIL5S Arachis hypogaea HOM05D005852 ORTHO05D006688 2.3e-10 70.1 91 49.5
arahy.Tifrunner.gnm1.ann1.BXR415 Arachis hypogaea HOM05D005852 ORTHO05D006688 2.3e-10 70.1 91 49.5
Potri.014G118100 Populus trichocarpa HOM05D005852 ORTHO05D006688 2.3e-10 70.1 91 50.5
Duzib138G0780 Durio zibethinus HOM05D005852 ORTHO05D006688 3.0e-10 69.7 118 43.2
SEGI_21105 Sequoiadendron giganteum HOM05D005852 ORTHO05D006688 3.0e-10 69.7 95 45.3
Ca_09223_v3 Cicer arietinum L. HOM05D005852 ORTHO05D006688 3.9e-10 69.3 95 45.3
Peaxi162Scf00174g00140 Petunia axillaris HOM05D005852 ORTHO05D006688 3.9e-10 69.3 91 47.3
Haze_05075 Corylus avellana HOM05D005852 ORTHO05D006688 5.1e-10 68.9 91 50.5
Sabra02G0163100 Salix brachista HOM05D005852 ORTHO05D006688 5.1e-10 68.9 91 48.4
GSVIVG01028150001 Vitis vinifera HOM05D005852 ORTHO05D006688 5.1e-10 68.9 85 52.9
Cpa.g.sc18.85 Carica papaya HOM05D005852 ORTHO05D006688 6.7e-10 68.6 99 46.5
Eucgr.K03554 Eucalyptus grandis HOM05D005852 ORTHO05D006688 6.7e-10 68.6 113 44.2
Gohir.D07G133700 Gossypium hirsutum HOM05D005852 ORTHO05D006688 6.7e-10 68.6 91 48.4
Gorai.001G145000 Gossypium raimondii HOM05D005852 ORTHO05D006688 6.7e-10 68.6 91 48.4
Hma1.2p1_0408F.1_g146510 Hydrangea macrophylla HOM05D005852 ORTHO05D006688 6.7e-10 68.6 91 50.5
Hma1.2p1_0486F.1_g163510 Hydrangea macrophylla HOM05D005852 ORTHO05D006688 6.7e-10 68.6 91 50.5
MD09G1285600 Malus domestica HOM05D005852 ORTHO05D006688 8.7e-10 68.2 91 49.5
Manes.01G230200 Manihot esculenta HOM05D005852 ORTHO05D006688 8.7e-10 68.2 86 52.3
Lj1g0015719 Lotus japonicus HOM05D005852 ORTHO05D006688 1.1e-09 67.8 92 52.2
PSO761G0671 Papaver somniferum HOM05D005852 ORTHO05D006688 1.1e-09 67.8 95 47.4
Potri.002G192800 Populus trichocarpa HOM05D005852 ORTHO05D006688 1.1e-09 67.8 91 48.4
RcHm_v2.0_Chr3g0487181 Rosa chinensis HOM05D005852 ORTHO05D006688 1.1e-09 67.8 91 49.5
SMO236G0022 Selaginella moellendorffii HOM05D017472 ORTHO05D006688 1.5e-09 67.4 91 45.1
COL.COLO4_23201 Corchorus olitorius HOM05D005852 ORTHO05D006688 1.9e-09 67.0 91 48.4
Duzib133G0199 Durio zibethinus HOM05D005852 ORTHO05D006688 1.9e-09 67.0 91 48.4
Ciclev10023332m.g Citrus clementina HOM05D005852 ORTHO05D006688 2.5e-09 66.6 91 50.5
Prupe.3G008300 Prunus persica HOM05D005852 ORTHO05D006688 2.5e-09 66.6 91 48.4
PSO210G2075 Papaver somniferum HOM05D005852 ORTHO05D006688 3.3e-09 66.2 95 47.4
THA.LOC104817449 Tarenaya hassleriana HOM05D005852 ORTHO05D006688 3.3e-09 66.2 88 47.7
Actinidia17918 Actinidia chinensis HOM05D005852 ORTHO05D006688 4.3e-09 65.9 91 48.4
Rhsim13G0003100 Rhododendron simsii HOM05D005852 ORTHO05D006688 4.3e-09 65.9 91 49.5
PGR044G1849 Punica granatum HOM05D005852 ORTHO05D006688 5.7e-09 65.5 91 49.5
vmacro02386 Vaccinium macrocarpon HOM05D005852 ORTHO05D006688 5.7e-09 65.5 91 49.5
Oeu040211.2 Olea europaea HOM05D005852 ORTHO05D006688 1.3e-08 64.3 91 46.2
Psat3g018920 Pisum sativum HOM05D005852 ORTHO05D006688 1.3e-08 64.3 91 48.4
Sed0012344 Sechium edule HOM05D005852 ORTHO05D006688 1.3e-08 64.3 88 50.0
MELO3C012930.2 Cucumis melo HOM05D005852 ORTHO05D006688 1.6e-08 63.9 88 51.1
CsaV3_3G026570 Cucumis sativus L. HOM05D005852 ORTHO05D006688 1.6e-08 63.9 88 51.1
SEGI_29962 Sequoiadendron giganteum HOM05D005852 ORTHO05D000002 1.6e-08 63.9 92 38.0
Migut.A00953 Erythranthe guttata HOM05D005852 ORTHO05D006688 2.2e-08 63.5 91 50.5
TWI36G1268 Tripterygium wilfordii HOM05D005852 ORTHO05D006688 4.8e-08 62.4 91 48.4
ClCG10G011590 Citrullus lanatus HOM05D005852 ORTHO05D006688 6.3e-08 62.0 88 50.0
Thhalv10005921m.g Eutrema salsugineum HOM05D005852 ORTHO05D006688 6.3e-08 62.0 92 44.6
Oeu002340.2 Olea europaea HOM05D005852 ORTHO05D006688 6.3e-08 62.0 91 44.0
Aa31LG10G16270 Aethionema arabicum HOM05D005852 ORTHO05D006688 1.1e-07 61.2 89 46.1
Hund17504 Selenicereus undatus HOM05D005852 ORTHO05D006688 1.1e-07 61.2 83 53.0
AT3G62330 Arabidopsis thaliana HOM05D005852 ORTHO05D006688 1.4e-07 60.8 89 44.9
Aqoxy5G02690 Aquilegia oxysepala HOM05D005852 ORTHO05D006688 1.8e-07 60.5 91 45.1
Atru.chr5.963 Acer truncatum HOM05D005852 ORTHO05D006688 2.4e-07 60.1 91 47.3
AL2G23460 Arabidopsis lyrata HOM05D005852 ORTHO05D006688 2.4e-07 60.1 88 42.0
AL5G45080 Arabidopsis lyrata HOM05D005852 ORTHO05D006688 2.4e-07 60.1 88 42.0
MSTRG.12100 Avicennia marina HOM05D005852 ORTHO05D006688 2.4e-07 60.1 91 44.0
THA.LOC104802145 Tarenaya hassleriana HOM05D005852 ORTHO05D006688 2.4e-07 60.1 88 47.7
TPR.G4094 Trifolium pratense HOM05D005852 ORTHO05D006688 2.4e-07 60.1 91 46.2
SHI33189 Sapria himalayana HOM05D005852 ORTHO05D006688 3.1e-07 59.7 91 47.3
EL10Ac1g01717 Beta vulgaris HOM05D005852 ORTHO05D006688 4.1e-07 59.3 82 50.0
Ah.05g168400 Amaranthus hybridus HOM05D005852 ORTHO05D006688 5.3e-07 58.9 82 51.2
AUR62022309 Chenopodium quinoa HOM05D005852 ORTHO05D006688 5.3e-07 58.9 91 46.2
AUR62034930 Chenopodium quinoa HOM05D005852 ORTHO05D006688 5.3e-07 58.9 91 46.2
Sc05g0000300 Simmondsia chinensis HOM05D005852 ORTHO05D006688 5.3e-07 58.9 82 48.8
Pp3c1_21140 Physcomitrium patens HOM05D005852 ORTHO05D006688 9.0e-07 58.2 96 38.5
Sp5g01060 Schrenkiella parvula HOM05D005852 ORTHO05D006688 9.0e-07 58.2 92 44.6
CiPaw.08G087500 Carya illinoinensis HOM05D005852 ORTHO05D006688 1.2e-06 57.8 94 46.8
FvH4_1g26940 Fragaria vesca HOM05D005852 ORTHO05D006688 1.2e-06 57.8 91 45.1
FAN19G1535 Fragaria x ananassa HOM05D005852 ORTHO05D006688 1.2e-06 57.8 91 45.1
FAN23G1709 Fragaria x ananassa HOM05D005852 ORTHO05D006688 1.2e-06 57.8 91 45.1
FAN26G2795 Fragaria x ananassa HOM05D005852 ORTHO05D006688 1.2e-06 57.8 91 45.1
FAN28G0451 Fragaria x ananassa HOM05D005852 ORTHO05D006688 1.2e-06 57.8 91 45.1
FAN28G0588 Fragaria x ananassa HOM05D005852 ORTHO05D006688 1.2e-06 57.8 91 45.1
Carub.0005s2904 Capsella rubella HOM05D005852 ORTHO05D006688 2.0e-06 57.0 88 44.3
CiPaw.07G119700 Carya illinoinensis HOM05D005852 ORTHO05D006688 2.0e-06 57.0 91 47.3
Solyc08g078610.4 Solanum lycopersicum HOM05D005852 ORTHO05D006688 2.0e-06 57.0 91 42.9
Sopen08g027090 Solanum pennellii HOM05D005852 ORTHO05D006688 2.0e-06 57.0 91 42.9
PGSC0003DMG400004761 Solanum tuberosum HOM05D005852 ORTHO05D006688 2.0e-06 57.0 91 42.9
Pp3c2_16330 Physcomitrium patens HOM05D005852 ORTHO05D006688 2.6e-06 56.6 96 37.5
CAN.G1058.28 Capsicum annuum HOM05D005852 ORTHO05D006688 3.4e-06 56.2 91 41.8
TWI75G1100 Tripterygium wilfordii HOM05D005852 ORTHO05D006688 4.5e-06 55.8 91 45.1
HanXRQChr10g0284731 Helianthus annuus HOM05D005852 ORTHO05D006688 7.7e-06 55.1 90 42.2


User provided reference genes

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