Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_012670 Vanilla planifolia HOM05D004297 ORTHO05D005213 1.7e-137 492.7 249 100.0
Duzib133G0964 Durio zibethinus HOM05D004297 ORTHO05D005213 4.1e-83 312.0 234 70.1
Thecc.01G355600 Theobroma cacao HOM05D004297 ORTHO05D005213 3.5e-82 308.9 234 70.9
COL.COLO4_12744 Corchorus olitorius HOM05D004297 ORTHO05D005213 6.0e-82 308.1 236 69.9
Manes.01G254400 Manihot esculenta HOM05D004297 ORTHO05D005213 6.0e-82 308.1 229 72.5
Sabra14G0063700 Salix brachista HOM05D004297 ORTHO05D005213 6.0e-82 308.1 231 72.3
Potri.014G087900 Populus trichocarpa HOM05D004297 ORTHO05D005213 1.0e-81 307.4 236 70.3
Actinidia10047 Actinidia chinensis HOM05D004297 ORTHO05D005213 5.1e-81 305.1 230 71.3
Gorai.001G159200 Gossypium raimondii HOM05D004297 ORTHO05D005213 8.6e-81 304.3 236 68.6
Actinidia20884 Actinidia chinensis HOM05D004297 ORTHO05D005213 1.1e-80 303.9 230 71.3
Dinv43843 Davidia involucrata HOM05D004297 ORTHO05D005213 1.1e-80 303.9 230 71.3
CSS0008006 Camellia sinensis var. sinensis HOM05D004297 ORTHO05D005213 1.5e-80 303.5 231 70.1
Duzib138G1153 Durio zibethinus HOM05D004297 ORTHO05D005213 1.5e-80 303.5 230 70.0
PGR042G3632 Punica granatum HOM05D004297 ORTHO05D005213 1.5e-80 303.5 238 68.5
Glyma.09G256700 Glycine max HOM05D004297 ORTHO05D005213 1.9e-80 303.1 232 70.3
Gohir.A07G141200 Gossypium hirsutum HOM05D004297 ORTHO05D005213 1.9e-80 303.1 236 68.6
DCAR_006941 Daucus carota HOM05D004297 ORTHO05D005213 3.3e-80 302.4 237 68.4
Glyma.18G235800 Glycine max HOM05D004297 ORTHO05D005213 3.3e-80 302.4 232 69.8
Rhsim07G0012700 Rhododendron simsii HOM05D004297 ORTHO05D005213 3.3e-80 302.4 260 64.2
Lj1g0026001 Lotus japonicus HOM05D004297 ORTHO05D005213 9.5e-80 300.8 236 68.6
Cfa003893 Carpinus fangiana HOM05D004297 ORTHO05D005213 1.2e-79 300.4 232 69.8
CiPaw.02G033500 Carya illinoinensis HOM05D004297 ORTHO05D005213 1.2e-79 300.4 232 70.7
Zm00001eb192800 Zea mays HOM05D004297 ORTHO05D005213 1.2e-79 300.4 240 69.2
PSO063G5582 Papaver somniferum HOM05D004297 ORTHO05D005213 1.6e-79 300.1 231 70.1
arahy.Tifrunner.gnm1.ann1.0F1BT2 Arachis hypogaea HOM05D004297 ORTHO05D005213 2.8e-79 299.3 232 69.4
arahy.Tifrunner.gnm1.ann1.553FBT Arachis hypogaea HOM05D004297 ORTHO05D005213 2.8e-79 299.3 234 68.8
Prupe.2G174200 Prunus persica HOM05D004297 ORTHO05D005213 2.8e-79 299.3 235 69.4
Cc02_g38370 Coffea canephora HOM05D004297 ORTHO05D005213 3.6e-79 298.9 229 70.3
Os02g0786000 Oryza sativa ssp. japonica HOM05D004297 ORTHO05D005213 3.6e-79 298.9 240 67.9
RcHm_v2.0_Chr7g0221211 Rosa chinensis HOM05D004297 ORTHO05D005213 4.7e-79 298.5 234 69.2
Zm00001eb257250 Zea mays HOM05D004297 ORTHO05D005213 4.7e-79 298.5 240 67.9
QL04p054287 Quercus lobata HOM05D004297 ORTHO05D005213 6.2e-79 298.1 229 70.3
Sopen01g038660 Solanum pennellii HOM05D004297 ORTHO05D005213 6.2e-79 298.1 232 69.4
CANSAT56G3337 Cannabis sativa HOM05D004297 ORTHO05D005213 8.1e-79 297.7 240 67.5
CAN.G78.102 Capsicum annuum HOM05D004297 ORTHO05D005213 8.1e-79 297.7 234 68.4
Sabra02G0129100 Salix brachista HOM05D004297 ORTHO05D005213 8.1e-79 297.7 255 65.1
Lalb_Chr03g0038271 Lupinus albus HOM05D004297 ORTHO05D005213 1.1e-78 297.4 232 68.5
Potri.002G162000 Populus trichocarpa HOM05D004297 ORTHO05D005213 1.4e-78 297.0 253 65.6
Solyc01g094880.3 Solanum lycopersicum HOM05D004297 ORTHO05D005213 1.4e-78 297.0 232 69.0
vmacro13256 Vaccinium macrocarpon HOM05D004297 ORTHO05D005213 1.4e-78 297.0 233 69.5
CiPaw.01G064500 Carya illinoinensis HOM05D004297 ORTHO05D005213 1.8e-78 296.6 230 70.0
Aqoxy5G04078 Aquilegia oxysepala HOM05D004297 ORTHO05D005213 2.4e-78 296.2 230 70.0
Phvul.008G060200 Phaseolus vulgaris HOM05D004297 ORTHO05D005213 2.4e-78 296.2 235 68.1
Atru.chr5.535 Acer truncatum HOM05D004297 ORTHO05D005213 3.1e-78 295.8 234 67.9
Eucgr.E00109 Eucalyptus grandis HOM05D004297 ORTHO05D005213 3.1e-78 295.8 237 67.5
Medtr7g078170 Medicago truncatula HOM05D004297 ORTHO05D005213 3.1e-78 295.8 237 67.5
Psat3g107280 Pisum sativum HOM05D004297 ORTHO05D005213 3.1e-78 295.8 234 68.4
FvH4_5g28900 Fragaria vesca HOM05D004297 ORTHO05D005213 4.0e-78 295.4 239 67.4
FAN13G2415 Fragaria x ananassa HOM05D004297 ORTHO05D005213 4.0e-78 295.4 239 67.4
FAN18G0188 Fragaria x ananassa HOM05D004297 ORTHO05D005213 4.0e-78 295.4 239 67.4
TAR629G2795 Trochodendron aralioides HOM05D004297 ORTHO05D005213 4.0e-78 295.4 231 70.1
Oeu036598.1 Olea europaea HOM05D004297 ORTHO05D005213 8.9e-78 294.3 238 67.2
MSTRG.17286 Avicennia marina HOM05D004297 ORTHO05D005213 1.5e-77 293.5 235 67.7
Lj9C586G6 Lonicera japonica HOM05D004297 ORTHO05D005213 1.5e-77 293.5 233 67.4
TPR.G37786 Trifolium pratense HOM05D004297 ORTHO05D005213 1.5e-77 293.5 239 66.5
VMungo1383G1290 Vigna mungo HOM05D004297 ORTHO05D005213 1.5e-77 293.5 236 66.9
GSVIVG01026995001 Vitis vinifera HOM05D004297 ORTHO05D005213 3.4e-77 292.4 230 68.3
TWI59G0377 Tripterygium wilfordii HOM05D004297 ORTHO05D005213 1.3e-76 290.4 228 69.3
CDE04G3641 Ceratophyllum demersum HOM05D004297 ORTHO05D005213 2.2e-76 289.7 237 65.4
Sc23g0002720 Simmondsia chinensis HOM05D004297 ORTHO05D005213 2.2e-76 289.7 229 67.7
Dinv32504 Davidia involucrata HOM05D004297 ORTHO05D005213 3.8e-76 288.9 255 63.5
Hund27256 Selenicereus undatus HOM05D004297 ORTHO05D005213 3.8e-76 288.9 229 68.6
Peaxi162Scf41243g00005 Petunia axillaris HOM05D004297 ORTHO05D005213 4.9e-76 288.5 182 83.0
Migut.B01779 Erythranthe guttata HOM05D004297 ORTHO05D005213 8.4e-76 287.7 233 66.1
Nn6g33322 Nelumbo nucifera HOM05D004297 ORTHO05D005213 1.1e-75 287.3 236 66.1
SGA_v2.0_scaffold78G25411 Striga asiatica HOM05D004297 ORTHO05D005213 1.9e-75 286.6 236 66.5
HanXRQChr04g0121341 Helianthus annuus HOM05D004297 ORTHO05D005213 2.4e-75 286.2 230 67.4
Lsat_1_v5_gn_7_3220 Lactuca sativa HOM05D004297 ORTHO05D005213 4.1e-75 285.4 231 67.1
AUR62022597 Chenopodium quinoa HOM05D004297 ORTHO05D005213 7.1e-75 284.6 269 61.3
Ciclev10018597m.g Citrus clementina HOM05D004297 ORTHO05D005213 7.1e-75 284.6 236 66.1
ECA236G0245 Erigeron canadensis HOM05D004297 ORTHO05D005213 3.5e-74 282.3 229 67.2
Sed0013986 Sechium edule HOM05D004297 ORTHO05D005213 1.3e-73 280.4 228 69.3
THA.LOC104817308 Tarenaya hassleriana HOM05D004297 ORTHO05D005213 1.3e-73 280.4 237 64.1
Thhalv10005756m.g Eutrema salsugineum HOM05D004297 ORTHO05D005213 3.0e-73 279.3 238 63.0
SalBow3G3037 Salvia bowleyana HOM05D004297 ORTHO05D005213 3.9e-73 278.9 230 65.2
unitig_749.g14347 Utricularia gibba HOM05D004297 ORTHO05D005213 6.6e-73 278.1 240 64.2
BraA09t40777Z Brassica rapa HOM05D004297 ORTHO05D005213 4.3e-72 275.4 239 63.2
BcaC07g40648 Brassica carinata HOM05D004297 ORTHO05D005213 5.6e-72 275.0 239 63.2
A09p53530 Brassica napus HOM05D004297 ORTHO05D005213 5.6e-72 275.0 239 63.2
C08p36360 Brassica napus HOM05D004297 ORTHO05D005213 5.6e-72 275.0 239 63.2
BolC8t51219H Brassica oleracea HOM05D004297 ORTHO05D005213 5.6e-72 275.0 239 63.2
MELO3C021189.2 Cucumis melo HOM05D004297 ORTHO05D005213 5.6e-72 275.0 228 67.1
CsaV3_6G000810 Cucumis sativus L. HOM05D004297 ORTHO05D005213 1.2e-71 273.9 228 66.7
AL5G43840 Arabidopsis lyrata HOM05D004297 ORTHO05D005213 2.1e-71 273.1 238 62.2
AT3G61480 Arabidopsis thaliana HOM05D004297 ORTHO05D005213 2.8e-71 272.7 238 62.2
Carub.0005s2817 Capsella rubella HOM05D004297 ORTHO05D005213 3.6e-71 272.3 238 62.6
AT5G28350 Arabidopsis thaliana HOM05D004297 ORTHO05D005213 4.7e-71 271.9 238 62.2
Cpa.g.sc11.37 Carica papaya HOM05D004297 ORTHO05D005213 6.2e-71 271.6 208 70.7
ClCG06G003500 Citrullus lanatus HOM05D004297 ORTHO05D005213 6.2e-71 271.6 228 66.7
Gohir.D07G146700 Gossypium hirsutum HOM05D004297 ORTHO05D005213 5.2e-70 268.5 236 62.7
CARHR171820 Cardamine hirsuta HOM05D004297 ORTHO05D005213 9.0e-70 267.7 234 63.7
Ca_00827_v3 Cicer arietinum L. HOM05D000005 ORTHO05D005213 5.8e-69 265.0 208 69.2
Nitab4.5_0000583g0330 Nicotiana tabacum HOM05D004297 ORTHO05D005213 1.3e-68 263.8 302 52.6
Aa31LG1G27480 Aethionema arabicum HOM05D004297 ORTHO05D005213 3.2e-67 259.2 237 59.1
Nitab4.5_0006942g0020 Nicotiana tabacum HOM05D004297 ORTHO05D005213 3.2e-67 259.2 267 57.7
EL10Ac1g00379 Beta vulgaris HOM05D004297 ORTHO05D005213 5.1e-65 251.9 229 62.4
ATR0661G292 Amborella trichopoda HOM05D004297 ORTHO05D005213 3.1e-62 242.7 236 59.7
AL5G43780 Arabidopsis lyrata HOM05D004297 ORTHO05D005213 1.5e-61 240.4 208 63.0
Peaxi162Scf00020g01027 Petunia axillaris HOM05D004297 ORTHO05D005213 1.3e-60 237.3 187 70.6
TAR636G0349 Trochodendron aralioides HOM05D004297 ORTHO05D005213 3.8e-60 235.7 189 70.4
AUR62004391 Chenopodium quinoa HOM05D004297 ORTHO05D005213 3.0e-57 226.1 250 54.8
SMO367G0176 Selaginella moellendorffii HOM05D004297 ORTHO05D005213 1.7e-52 210.3 251 49.0
Mapoly0027s0035 Marchantia polymorpha HOM05D004297 ORTHO05D005213 1.8e-49 200.3 223 51.1
Pp3c2_4880 Physcomitrium patens HOM05D004297 ORTHO05D005213 7.4e-48 194.9 234 50.0
Haze_15540 Corylus avellana HOM05D004297 ORTHO05D005213 1.6e-47 193.7 205 57.1
MD01G1068000 Malus domestica HOM05D004297 ORTHO05D005213 1.4e-46 190.7 198 58.1
AagrBONN_evm.TU.Sc2ySwM_344.3195 Anthoceros agrestis HOM05D004297 ORTHO05D005213 1.7e-44 183.7 218 48.6
Pp3c14_21590 Physcomitrium patens HOM05D004297 ORTHO05D005213 1.5e-40 170.6 239 44.4
Hma1.2p1_0071F.1_g037770 Hydrangea macrophylla HOM05D004297 ORTHO05D005213 2.2e-39 166.8 150 62.7
Hma1.2p1_0071F.1_g037780 Hydrangea macrophylla HOM05D004297 ORTHO05D005213 2.2e-39 166.8 150 62.7
CSS0030491 Camellia sinensis var. sinensis HOM05D004297 ORTHO05D005213 1.4e-38 164.1 152 61.2
MD11G1239500 Malus domestica HOM05D004297 ORTHO05D005213 1.4e-38 164.1 148 62.8
CBR_g36279 Chara braunii HOM05D004297 ORTHO05D005213 9.0e-38 161.4 232 44.0
arahy.Tifrunner.gnm1.ann1.K3XHZI Arachis hypogaea HOM05D004297 ORTHO05D005213 1.1e-30 137.9 86 77.9
BolC6t37919H Brassica oleracea HOM05D004297 ORTHO05D005213 2.4e-30 136.7 211 45.5
CSS0029755 Camellia sinensis var. sinensis HOM05D004297 ORTHO05D005213 1.5e-29 134.0 116 63.8
MD11G1239400 Malus domestica HOM05D004297 ORTHO05D005213 2.0e-29 133.7 79 82.3
C06p27520 Brassica napus HOM05D004297 ORTHO05D005213 3.2e-27 126.3 211 42.2
SEGI_34049 Sequoiadendron giganteum HOM05D004297 ORTHO05D005213 6.1e-26 122.1 86 70.9
SHI13402 Sapria himalayana HOM05D004297 ORTHO05D005213 5.7e-24 115.5 144 47.9
Lsat_1_v5_gn_9_9281 Lactuca sativa HOM05D004297 ORTHO05D005213 2.0e-13 80.5 69 65.2
arahy.Tifrunner.gnm1.ann1.ABA0S6 Arachis hypogaea HOM05D004297 ORTHO05D005213 2.1e-10 70.5 47 70.2
RcHm_v2.0_Chr1g0356931 Rosa chinensis HOM05D004297 ORTHO05D348627 8.0e-10 68.6 70 61.4
arahy.Tifrunner.gnm1.ann1.19V8U8 Arachis hypogaea HOM05D000005 ORTHO05D000012 8.8e-09 65.1 71 50.7


User provided reference genes

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