Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_012590 Vanilla planifolia HOM05D007860 ORTHO05D009950 6.0e-28 126.7 61 100.0
Cc00_g31060 Coffea canephora HOM05D007860 ORTHO05D009950 4.1e-16 87.4 56 71.4
Cc02_g07910 Coffea canephora HOM05D007860 ORTHO05D009950 1.2e-15 85.9 56 69.6
SalBow8G2293 Salvia bowleyana HOM05D007860 ORTHO05D009950 2.0e-15 85.1 56 71.4
Glyma.18G290700 Glycine max HOM05D007860 ORTHO05D009950 2.6e-15 84.7 61 67.2
COL.COLO4_15031 Corchorus olitorius HOM05D007860 ORTHO05D009950 3.4e-15 84.3 57 75.4
Hund16092 Selenicereus undatus HOM05D007860 ORTHO05D009950 3.4e-15 84.3 46 84.8
TWI63G0334 Tripterygium wilfordii HOM05D007860 ORTHO05D009950 4.5e-15 84.0 51 78.4
Gohir.D04G062700 Gossypium hirsutum HOM05D007860 ORTHO05D009950 5.9e-15 83.6 56 69.6
Gorai.012G070100 Gossypium raimondii HOM05D007860 ORTHO05D009950 5.9e-15 83.6 56 69.6
TPR.G1333 Trifolium pratense HOM05D007860 ORTHO05D009950 5.9e-15 83.6 50 76.0
Glyma.02G092000 Glycine max HOM05D007860 ORTHO05D009950 7.7e-15 83.2 52 71.2
Phvul.008G011200 Phaseolus vulgaris HOM05D007860 ORTHO05D009950 7.7e-15 83.2 47 78.7
Thecc.10G043200 Theobroma cacao HOM05D007860 ORTHO05D009950 7.7e-15 83.2 56 67.9
Gohir.A05G349600 Gossypium hirsutum HOM05D007860 ORTHO05D009950 1.0e-14 82.8 56 67.9
Sabra10G0157800 Salix brachista HOM05D007860 ORTHO05D009950 1.0e-14 82.8 57 66.7
Sed0021911 Sechium edule HOM05D007860 ORTHO05D009950 1.0e-14 82.8 47 78.7
CDE08G0617 Ceratophyllum demersum HOM05D007860 ORTHO05D009950 1.3e-14 82.4 49 77.6
Cfa009596 Carpinus fangiana HOM05D007860 ORTHO05D009950 1.7e-14 82.0 50 76.0
Zm00001eb205410 Zea mays HOM05D007860 ORTHO05D009950 2.2e-14 81.6 51 72.5
Gohir.A07G000500 Gossypium hirsutum HOM05D007860 ORTHO05D009950 2.9e-14 81.3 56 67.9
Lj1g0016082 Lotus japonicus HOM05D007860 ORTHO05D009950 3.8e-14 80.9 56 71.4
Lalb_Chr11g0073451 Lupinus albus HOM05D007860 ORTHO05D009950 3.8e-14 80.9 50 74.0
Solyc04g150108.1 Solanum lycopersicum HOM05D007860 ORTHO05D009950 3.8e-14 80.9 56 67.9
PGSC0003DMG400027747 Solanum tuberosum HOM05D007860 ORTHO05D009950 3.8e-14 80.9 56 67.9
CAN.G786.12 Capsicum annuum HOM05D007860 ORTHO05D009950 5.0e-14 80.5 56 67.9
unitig_747.g21379 Utricularia gibba HOM05D007860 ORTHO05D009950 6.5e-14 80.1 47 74.5
CiPaw.01G285600 Carya illinoinensis HOM05D007860 ORTHO05D009950 8.5e-14 79.7 47 72.3
CiPaw.01G286200 Carya illinoinensis HOM05D007860 ORTHO05D009950 8.5e-14 79.7 47 72.3
CsaV3_5G026630 Cucumis sativus L. HOM05D007860 ORTHO05D009950 1.1e-13 79.3 48 75.0
Migut.E01407 Erythranthe guttata HOM05D007860 ORTHO05D009950 1.4e-13 79.0 52 69.2
Migut.E01421 Erythranthe guttata HOM05D007860 ORTHO05D009950 1.4e-13 79.0 52 69.2
MELO3C033702.2 Cucumis melo HOM05D007860 ORTHO05D009950 1.9e-13 78.6 48 72.9
MBI05_g22876_MAGBIO Magnolia biondii HOM05D007860 ORTHO05D009950 1.9e-13 78.6 43 86.0
Potri.010G204200 Populus trichocarpa HOM05D007860 ORTHO05D009950 1.9e-13 78.6 57 64.9
Lalb_Chr10g0091671 Lupinus albus HOM05D007860 ORTHO05D009950 2.5e-13 78.2 50 74.0
MD16G1008700 Malus domestica HOM05D007860 ORTHO05D009950 2.5e-13 78.2 46 76.1
Nn3g16785 Nelumbo nucifera HOM05D007860 ORTHO05D009950 2.5e-13 78.2 45 73.3
Medtr7g026210 Medicago truncatula HOM05D007860 ORTHO05D009950 3.2e-13 77.8 50 74.0
Sc10g0001510 Simmondsia chinensis HOM05D007860 ORTHO05D009950 3.2e-13 77.8 42 81.0
Aa31LG3G410 Aethionema arabicum HOM05D007860 ORTHO05D009950 4.2e-13 77.4 47 80.9
Prupe.1G341800 Prunus persica HOM05D007860 ORTHO05D009950 4.2e-13 77.4 47 72.3
THA.LOC104817766 Tarenaya hassleriana HOM05D007860 ORTHO05D009950 4.2e-13 77.4 56 73.2
RcHm_v2.0_Chr4g0445811 Rosa chinensis HOM05D007860 ORTHO05D009950 5.5e-13 77.0 47 72.3
Aqoxy4G02946 Aquilegia oxysepala HOM05D007860 ORTHO05D009950 7.2e-13 76.6 47 74.5
Peaxi162Scf00760g00224 Petunia axillaris HOM05D007860 ORTHO05D009950 9.4e-13 76.3 51 66.7
Psat3g182840 Pisum sativum HOM05D007860 ORTHO05D009950 9.4e-13 76.3 42 81.0
VMungo1383G1282 Vigna mungo HOM05D007860 ORTHO05D009950 9.4e-13 76.3 43 81.4
SpUn0576_0010 Schrenkiella parvula HOM05D007860 ORTHO05D009950 1.2e-12 75.9 56 66.1
Nn4g22694 Nelumbo nucifera HOM05D007860 ORTHO05D009950 2.1e-12 75.1 43 79.1
PSO170G0009 Papaver somniferum HOM05D007860 ORTHO05D009950 2.1e-12 75.1 47 76.6
ClCG09G019790 Citrullus lanatus HOM05D007860 ORTHO05D009950 3.6e-12 74.3 42 81.0
AT4G26055 Arabidopsis thaliana HOM05D007860 ORTHO05D009950 4.6e-12 73.9 52 69.2
Carub.0007s1490 Capsella rubella HOM05D007860 ORTHO05D009950 6.1e-12 73.6 52 71.2
vmacro04194 Vaccinium macrocarpon HOM05D007860 ORTHO05D009950 6.1e-12 73.6 43 76.7
Manes.09G185000 Manihot esculenta HOM05D007860 ORTHO05D009950 7.9e-12 73.2 56 64.3
C07p54670 Brassica napus HOM05D007860 ORTHO05D009950 1.4e-11 72.4 56 69.6
BolC7t45956H Brassica oleracea HOM05D007860 ORTHO05D009950 1.4e-11 72.4 56 69.6
A03p56460 Brassica napus HOM05D002589 ORTHO05D002742 3.0e-11 71.2 56 67.9
BraA03t14716Z Brassica rapa HOM05D007860 ORTHO05D009950 3.0e-11 71.2 56 67.9
arahy.Tifrunner.gnm1.ann1.WKZY2Y Arachis hypogaea HOM05D007860 ORTHO05D009950 3.9e-11 70.9 40 77.5
DCAR_011692 Daucus carota HOM05D007860 ORTHO05D009950 3.9e-11 70.9 47 70.2
Lsat_1_v5_gn_8_15760 Lactuca sativa HOM05D007860 ORTHO05D009950 3.9e-11 70.9 52 67.3
Oeu017367.1 Olea europaea HOM05D007860 ORTHO05D009950 3.9e-11 70.9 45 75.6
CSS0034636 Camellia sinensis var. sinensis HOM05D007860 ORTHO05D009950 5.1e-11 70.5 42 73.8
HanXRQChr08g0220681 Helianthus annuus HOM05D007860 ORTHO05D009950 5.1e-11 70.5 43 74.4
SEGI_33557 Sequoiadendron giganteum HOM05D007860 ORTHO05D009950 6.7e-11 70.1 51 70.6
Actinidia13876 Actinidia chinensis HOM05D007860 ORTHO05D009950 1.1e-10 69.3 42 71.4
AL7G26930 Arabidopsis lyrata HOM05D007860 ORTHO05D009950 1.1e-10 69.3 48 72.9
BcaC07g38219 Brassica carinata HOM05D007860 ORTHO05D009950 1.5e-10 68.9 56 66.1
A08p20930 Brassica napus HOM05D007860 ORTHO05D009950 1.5e-10 68.9 56 66.1
C08p09770 Brassica napus HOM05D002589 ORTHO05D002742 1.5e-10 68.9 56 66.1
BolC8t48648H Brassica oleracea HOM05D002589 ORTHO05D002742 1.5e-10 68.9 56 66.1
BraA08t34046Z Brassica rapa HOM05D007860 ORTHO05D009950 1.5e-10 68.9 56 66.1
CARHR233560 Cardamine hirsuta HOM05D007860 ORTHO05D009950 2.0e-10 68.6 52 67.3
Ciclev10033443m.g Citrus clementina HOM05D007860 ORTHO05D009950 2.6e-10 68.2 39 79.5
Thhalv10026736m.g Eutrema salsugineum HOM05D007860 ORTHO05D009950 2.6e-10 68.2 47 72.3
FAN22G0325 Fragaria x ananassa HOM05D007860 ORTHO05D009950 3.3e-10 67.8 67 56.7
AT5G57080 Arabidopsis thaliana HOM05D007860 ORTHO05D009950 4.4e-10 67.4 52 65.4
EL10Ac2g04657 Beta vulgaris HOM05D007860 ORTHO05D009950 2.2e-09 65.1 47 63.8
Sp6g18800 Schrenkiella parvula HOM05D007860 ORTHO05D009950 2.2e-09 65.1 48 66.7
BraA03t10609Z Brassica rapa HOM05D007860 ORTHO05D009950 6.3e-09 63.5 48 66.7
BcaB01g04442 Brassica carinata HOM05D007860 ORTHO05D009950 8.2e-09 63.2 39 76.9
BcaNung07291 Brassica carinata HOM05D007860 ORTHO05D009950 5.9e-07 57.0 39 74.4


User provided reference genes

Program Settings