Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_012471 Vanilla planifolia HOM05D002619 ORTHO05D002804 1.2e-68 263.1 131 100.0
HPP92_012580 Vanilla planifolia HOM05D002619 ORTHO05D002804 5.4e-58 227.6 115 99.1
HPP92_000709 Vanilla planifolia HOM05D002619 ORTHO05D002804 5.7e-15 84.7 83 47.0
HPP92_000712 Vanilla planifolia HOM05D002619 ORTHO05D002804 5.7e-15 84.7 83 47.0
Cc01_g12250 Coffea canephora HOM05D002619 ORTHO05D002804 4.5e-12 75.1 120 35.8
Dinv32845 Davidia involucrata HOM05D002619 ORTHO05D002804 1.0e-11 73.9 96 40.6
CSS0041199 Camellia sinensis var. sinensis HOM05D002619 ORTHO05D002804 5.0e-11 71.6 103 39.8
Nn2g10492 Nelumbo nucifera HOM05D002619 ORTHO05D002804 6.5e-11 71.2 108 43.5
Sabra16G0141400 Salix brachista HOM05D002619 ORTHO05D002804 8.4e-11 70.9 83 48.2
CAN.G820.11 Capsicum annuum HOM05D002619 ORTHO05D002804 1.1e-10 70.5 69 52.2
GSVIVG01025039001 Vitis vinifera HOM05D002619 ORTHO05D002804 1.1e-10 70.5 118 39.0
CiPaw.13G099700 Carya illinoinensis HOM05D002619 ORTHO05D002804 1.4e-10 70.1 76 46.1
Dinv26273 Davidia involucrata HOM05D002619 ORTHO05D002804 1.4e-10 70.1 90 43.3
TAR623G0548 Trochodendron aralioides HOM05D002619 ORTHO05D002804 1.4e-10 70.1 107 41.1
Cpa.g.sc252.23 Carica papaya HOM05D002619 ORTHO05D002804 3.2e-10 68.9 95 40.0
PSO339G4672 Papaver somniferum HOM05D002619 ORTHO05D002804 4.2e-10 68.6 113 38.1
Peaxi162Scf00406g00007 Petunia axillaris HOM05D002619 ORTHO05D002804 4.2e-10 68.6 90 41.1
Actinidia37246 Actinidia chinensis HOM05D002619 ORTHO05D002804 7.2e-10 67.8 108 40.7
HanXRQChr11g0340291 Helianthus annuus HOM05D002619 ORTHO05D002804 9.3e-10 67.4 81 46.9
PGSC0003DMG400015561 Solanum tuberosum HOM05D002619 ORTHO05D002804 1.2e-09 67.0 68 50.0
Potri.006G256801 Populus trichocarpa HOM05D002619 ORTHO05D002804 1.6e-09 66.6 76 44.7
PSO206G0036 Papaver somniferum HOM05D002619 ORTHO05D002804 2.1e-09 66.2 116 36.2
Lj1A161T60 Lonicera japonica HOM05D002619 ORTHO05D002804 2.7e-09 65.9 74 51.4
Peaxi162Scf00406g00012 Petunia axillaris HOM05D002619 ORTHO05D002804 2.7e-09 65.9 69 46.4
TAR633G1544 Trochodendron aralioides HOM05D002619 ORTHO05D002804 2.7e-09 65.9 101 41.6
COL.COLO4_18442 Corchorus olitorius HOM05D002619 ORTHO05D002804 4.6e-09 65.1 116 43.1
PGSC0003DMG400015562 Solanum tuberosum HOM05D002619 ORTHO05D002804 4.6e-09 65.1 69 43.5
ECA248G0080 Erigeron canadensis HOM05D002619 ORTHO05D002804 6.1e-09 64.7 81 46.9
Sabra06G0201000 Salix brachista HOM05D002619 ORTHO05D002804 6.1e-09 64.7 108 34.3
Cfa011444 Carpinus fangiana HOM05D002619 ORTHO05D002804 7.9e-09 64.3 69 46.4
HanXRQChr08g0228281 Helianthus annuus HOM05D002619 ORTHO05D002804 1.0e-08 63.9 75 48.0
Potri.009G027100 Populus trichocarpa HOM05D002619 ORTHO05D002804 1.0e-08 63.9 69 47.8
Gohir.D07G099900 Gossypium hirsutum HOM05D002619 ORTHO05D002804 1.3e-08 63.5 70 48.6
Gorai.001G107800 Gossypium raimondii HOM05D002619 ORTHO05D002804 1.3e-08 63.5 75 46.7
MBI14_g29800_MAGBIO Magnolia biondii HOM05D002619 ORTHO05D002804 1.3e-08 63.5 93 45.2
Potri.001G235200 Populus trichocarpa HOM05D002619 ORTHO05D002804 2.3e-08 62.8 83 47.0
Atru.chr3.3814 Acer truncatum HOM05D002619 ORTHO05D002804 3.9e-08 62.0 78 44.9
A07p19190 Brassica napus HOM05D002619 ORTHO05D002804 3.9e-08 62.0 96 39.6
CAN.G241.40 Capsicum annuum HOM05D002619 ORTHO05D002804 3.9e-08 62.0 69 49.3
CiPaw.14G072600 Carya illinoinensis HOM05D002619 ORTHO05D002804 5.1e-08 61.6 95 34.7
Actinidia03780 Actinidia chinensis HOM05D002619 ORTHO05D002804 6.7e-08 61.2 69 44.9
BraA07t29626Z Brassica rapa HOM05D002619 ORTHO05D002804 6.7e-08 61.2 96 38.5
Cc01_g04170 Coffea canephora HOM05D002619 ORTHO05D002804 6.7e-08 61.2 96 37.5
Eucgr.B02404 Eucalyptus grandis HOM05D002619 ORTHO05D002804 6.7e-08 61.2 95 41.1
Thhalv10017181m.g Eutrema salsugineum HOM05D002619 ORTHO05D002804 6.7e-08 61.2 103 38.8
BolC4t23756H Brassica oleracea HOM05D002619 ORTHO05D002804 8.7e-08 60.8 96 38.5
CDE02G0555 Ceratophyllum demersum HOM05D002619 ORTHO05D002804 8.7e-08 60.8 115 39.1
MBI05_g38495_MAGBIO Magnolia biondii HOM05D002619 ORTHO05D002804 1.1e-07 60.5 114 35.1
Nitab4.5_0003179g0010 Nicotiana tabacum HOM05D002619 ORTHO05D002804 1.1e-07 60.5 63 50.8
HanXRQChr01g0009911 Helianthus annuus HOM05D002619 ORTHO05D002804 1.5e-07 60.1 86 40.7
TWI75G1695 Tripterygium wilfordii HOM05D002619 ORTHO05D002804 1.5e-07 60.1 95 38.9
ATR0033G031 Amborella trichopoda HOM05D002619 ORTHO05D002804 1.9e-07 59.7 112 36.6
Nitab4.5_0000610g0270 Nicotiana tabacum HOM05D002619 ORTHO05D002804 1.9e-07 59.7 63 50.8
Nitab4.5_0003179g0040 Nicotiana tabacum HOM05D002619 ORTHO05D002804 1.9e-07 59.7 65 50.8
C04p22400 Brassica napus HOM05D002619 ORTHO05D002804 2.5e-07 59.3 66 47.0
CDE09G0663 Ceratophyllum demersum HOM05D002619 ORTHO05D002920 2.5e-07 59.3 102 40.2
Hma1.2p1_0035F.1_g022040 Hydrangea macrophylla HOM05D002619 ORTHO05D002804 2.5e-07 59.3 79 43.0
Manes.11G134700 Manihot esculenta HOM05D002619 ORTHO05D002804 2.5e-07 59.3 84 41.7
Prupe.6G248900 Prunus persica HOM05D000001 ORTHO05D009784 2.5e-07 59.3 100 38.0
Hund05001 Selenicereus undatus HOM05D002619 ORTHO05D002804 2.5e-07 59.3 77 44.2
Thecc.09G328300 Theobroma cacao HOM05D002619 ORTHO05D002804 2.5e-07 59.3 115 40.0
CARHR121800 Cardamine hirsuta HOM05D002619 ORTHO05D002804 3.3e-07 58.9 80 41.2
PGR102G0064 Punica granatum HOM05D002619 ORTHO05D002804 3.3e-07 58.9 68 47.1
TWI79G1700 Tripterygium wilfordii HOM05D002619 ORTHO05D002804 3.3e-07 58.9 113 36.3
vmacro03117 Vaccinium macrocarpon HOM05D002619 ORTHO05D002804 3.3e-07 58.9 63 54.0
MSTRG.21180 Avicennia marina HOM05D002619 ORTHO05D002804 4.3e-07 58.5 70 42.9
BcaB02g10192 Brassica carinata HOM05D002619 ORTHO05D002804 4.3e-07 58.5 96 36.5
Prupe.6G085300 Prunus persica HOM05D002619 ORTHO05D002804 4.3e-07 58.5 72 41.7
SalBow1G2722 Salvia bowleyana HOM05D002619 ORTHO05D002804 4.3e-07 58.5 73 42.5
PGSC0003DMG400010881 Solanum tuberosum HOM05D002619 ORTHO05D002804 4.3e-07 58.5 71 46.5
Nitab4.5_0003179g0060 Nicotiana tabacum HOM05D002619 ORTHO05D002804 5.7e-07 58.2 81 42.0
SalBow3G1374 Salvia bowleyana HOM05D002619 ORTHO05D002804 5.7e-07 58.2 131 32.1
Lsat_1_v5_gn_5_166460 Lactuca sativa HOM05D002619 ORTHO05D002804 7.4e-07 57.8 84 40.5
Sed0021945 Sechium edule HOM05D002619 ORTHO05D002804 7.4e-07 57.8 86 39.5
TWI31G0042 Tripterygium wilfordii HOM05D002619 ORTHO05D002804 7.4e-07 57.8 72 43.1
Gohir.A03G038401 Gossypium hirsutum HOM05D002619 ORTHO05D002804 9.7e-07 57.4 67 44.8
Duzib170G0200 Durio zibethinus HOM05D002619 ORTHO05D002804 1.3e-06 57.0 83 39.8
Oeu062318.1 Olea europaea HOM05D002619 ORTHO05D002804 1.3e-06 57.0 94 36.2
Nitab4.5_0000610g0250 Nicotiana tabacum HOM05D002619 ORTHO05D002804 1.6e-06 56.6 84 39.3
TAR369G0856 Trochodendron aralioides HOM05D002619 ORTHO05D002804 1.6e-06 56.6 107 39.3
Gohir.A13G229100 Gossypium hirsutum HOM05D002619 ORTHO05D002804 2.2e-06 56.2 98 39.8
Gohir.D03G130000 Gossypium hirsutum HOM05D002619 ORTHO05D002804 2.2e-06 56.2 67 43.3
Sc12g0001720 Simmondsia chinensis HOM05D002619 ORTHO05D002804 2.2e-06 56.2 116 33.6
Solyc06g005300.4 Solanum lycopersicum HOM05D002619 ORTHO05D002804 2.2e-06 56.2 69 44.9
GSVIVG01025607001 Vitis vinifera HOM05D000001 ORTHO05D009784 2.2e-06 56.2 108 37.0
MSTRG.18597 Avicennia marina HOM05D002619 ORTHO05D002804 2.8e-06 55.8 92 35.9
Carub.0004s0969 Capsella rubella HOM05D002619 ORTHO05D002804 2.8e-06 55.8 96 35.4
CsaV3_6G022160 Cucumis sativus L. HOM05D002619 ORTHO05D002804 2.8e-06 55.8 93 34.4
Gohir.D13G234700 Gossypium hirsutum HOM05D002619 ORTHO05D002804 2.8e-06 55.8 89 39.3
Gorai.013G265500 Gossypium raimondii HOM05D002619 ORTHO05D002804 2.8e-06 55.8 89 39.3
Sp4g11560 Schrenkiella parvula HOM05D002619 ORTHO05D002804 2.8e-06 55.8 96 35.4
MD03G1100400 Malus domestica HOM05D002619 ORTHO05D002804 3.7e-06 55.5 87 37.9
Nitab4.5_0000610g0280 Nicotiana tabacum HOM05D002619 ORTHO05D002804 3.7e-06 55.5 107 32.7
CARHR273340 Cardamine hirsuta HOM05D002619 ORTHO05D002804 4.8e-06 55.1 117 31.6
Sabra18G0027500 Salix brachista HOM05D002619 ORTHO05D002804 4.8e-06 55.1 60 50.0
AT2G28690 Arabidopsis thaliana HOM05D002619 ORTHO05D002804 6.3e-06 54.7 80 40.0
Migut.D02134 Erythranthe guttata HOM05D002619 ORTHO05D002804 6.3e-06 54.7 74 40.5
MD11G1114400 Malus domestica HOM05D002619 ORTHO05D002804 6.3e-06 54.7 87 35.6
Nitab4.5_0011620g0010 Nicotiana tabacum HOM05D002619 ORTHO05D002804 6.3e-06 54.7 62 43.5
THA.LOC104826341 Tarenaya hassleriana HOM05D002619 ORTHO05D002804 6.3e-06 54.7 107 35.5
ClCG02G020460 Citrullus lanatus HOM05D002619 ORTHO05D002804 8.2e-06 54.3 93 35.5
MELO3C013675.2 Cucumis melo HOM05D002619 ORTHO05D002804 8.2e-06 54.3 94 34.0
Gorai.003G136700 Gossypium raimondii HOM05D002619 ORTHO05D002804 8.2e-06 54.3 67 43.3


User provided reference genes

Program Settings