Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_012318 Vanilla planifolia HOM05D005165 ORTHO05D006361 6.4e-172 607.8 436 100.0
HPP92_012397 Vanilla planifolia HOM05D005165 ORTHO05D006361 2.2e-111 406.8 482 73.2
Dinv13878 Davidia involucrata HOM05D005165 ORTHO05D006361 1.4e-38 164.9 393 31.8
Haze_06780 Corylus avellana HOM05D005165 ORTHO05D006361 7.1e-38 162.5 431 46.6
MBI02_g22104_MAGBIO Magnolia biondii HOM05D005165 ORTHO05D006361 1.2e-37 161.8 417 34.1
Nn1g03565 Nelumbo nucifera HOM05D005165 ORTHO05D006361 1.6e-37 161.4 454 29.5
Cfa000241 Carpinus fangiana HOM05D005165 ORTHO05D006361 2.1e-37 161.0 432 38.7
Zm00001eb322760 Zea mays HOM05D005165 ORTHO05D006361 3.5e-37 160.2 448 47.1
QL05p073800 Quercus lobata HOM05D005165 ORTHO05D006361 6.6e-36 156.0 465 28.6
MELO3C002466.2 Cucumis melo HOM05D005165 ORTHO05D006361 8.7e-36 155.6 357 33.1
TAR627G0931 Trochodendron aralioides HOM05D005165 ORTHO05D006361 2.5e-35 154.1 399 30.8
arahy.Tifrunner.gnm1.ann1.K6JFDD Arachis hypogaea HOM05D005165 ORTHO05D006361 3.3e-35 153.7 462 29.0
CiPaw.09G090000 Carya illinoinensis HOM05D005165 ORTHO05D006361 4.3e-35 153.3 397 29.7
arahy.Tifrunner.gnm1.ann1.FU33AK Arachis hypogaea HOM05D005165 ORTHO05D006361 7.3e-35 152.5 467 29.1
CSS0001066 Camellia sinensis var. sinensis HOM05D005165 ORTHO05D006361 9.6e-35 152.1 420 31.4
arahy.Tifrunner.gnm1.ann1.QZ1TNI Arachis hypogaea HOM05D005165 ORTHO05D006361 1.3e-34 151.8 405 30.4
Atru.chr10.2199 Acer truncatum HOM05D005165 ORTHO05D006361 2.1e-34 151.0 207 44.0
PSO541G6479 Papaver somniferum HOM05D005165 ORTHO05D006361 2.8e-34 150.6 202 45.0
Ciclev10014034m.g Citrus clementina HOM05D005165 ORTHO05D006361 6.2e-34 149.4 445 27.9
CsaV3_1G010870 Cucumis sativus L. HOM05D005165 ORTHO05D006361 1.1e-33 148.7 388 33.2
PSO675G7058 Papaver somniferum HOM05D005165 ORTHO05D006361 1.4e-33 148.3 202 44.6
Glyma.17G014900 Glycine max HOM05D005165 ORTHO05D006361 1.8e-33 147.9 212 44.8
Eucgr.D01308 Eucalyptus grandis HOM05D005165 ORTHO05D006361 3.1e-33 147.1 486 29.0
Potri.004G017500 Populus trichocarpa HOM05D005165 ORTHO05D006361 3.1e-33 147.1 432 30.8
Lalb_Chr01g0014921 Lupinus albus HOM05D005165 ORTHO05D006361 5.3e-33 146.4 214 43.0
Hund23483 Selenicereus undatus HOM05D005165 ORTHO05D006361 5.3e-33 146.4 410 30.0
Manes.17G037700 Manihot esculenta HOM05D005165 ORTHO05D006361 6.9e-33 146.0 377 30.0
PGR004G2872 Punica granatum HOM05D005165 ORTHO05D006361 9.0e-33 145.6 202 44.6
Rhsim13G0155600 Rhododendron simsii HOM05D005165 ORTHO05D006361 9.0e-33 145.6 403 38.0
BcaNung02250 Brassica carinata HOM05D005165 ORTHO05D006361 1.2e-32 145.2 215 41.4
BcaC09g51197 Brassica carinata HOM05D005165 ORTHO05D006361 1.5e-32 144.8 214 41.6
C01p15840 Brassica napus HOM05D005165 ORTHO05D006361 1.5e-32 144.8 214 41.6
BolC1t01538H Brassica oleracea HOM05D005165 ORTHO05D006361 1.5e-32 144.8 214 41.6
VMungo1215G1456 Vigna mungo HOM05D005165 ORTHO05D000002 1.5e-32 144.8 213 44.1
Sed0027912 Sechium edule HOM05D005165 ORTHO05D006361 2.6e-32 144.1 201 43.8
Thhalv10024235m.g Eutrema salsugineum HOM05D005165 ORTHO05D006361 3.4e-32 143.7 211 41.7
Oeu063907.1 Olea europaea HOM05D005165 ORTHO05D006361 3.4e-32 143.7 213 42.3
CANSAT56G1527 Cannabis sativa HOM05D005165 ORTHO05D006361 4.5e-32 143.3 202 44.1
A01p13150 Brassica napus HOM05D005165 ORTHO05D006361 7.6e-32 142.5 214 40.7
BraA01t01259Z Brassica rapa HOM05D005165 ORTHO05D006361 7.6e-32 142.5 214 40.7
AUR62012682 Chenopodium quinoa HOM05D005165 ORTHO05D006361 9.9e-32 142.1 389 28.5
Medtr4g131940 Medicago truncatula HOM05D005165 ORTHO05D006361 1.3e-31 141.7 214 40.2
vmacro03694 Vaccinium macrocarpon HOM05D005165 ORTHO05D006361 1.3e-31 141.7 413 27.6
Duzib235G1549 Durio zibethinus HOM05D005165 ORTHO05D006361 2.2e-31 141.0 209 41.1
Phvul.003G077600 Phaseolus vulgaris HOM05D005165 ORTHO05D006361 2.2e-31 141.0 213 42.3
THA.LOC104813036 Tarenaya hassleriana HOM05D005165 ORTHO05D006361 2.9e-31 140.6 211 41.7
Actinidia05522 Actinidia chinensis HOM05D005165 ORTHO05D006361 4.9e-31 139.8 429 30.3
AUR62021974 Chenopodium quinoa HOM05D005165 ORTHO05D006361 4.9e-31 139.8 389 28.5
Migut.M01303 Erythranthe guttata HOM05D005165 ORTHO05D006361 4.9e-31 139.8 203 41.9
MSTRG.15979 Avicennia marina HOM05D005165 ORTHO05D006361 6.4e-31 139.4 202 44.1
Peaxi162Scf00262g00611 Petunia axillaris HOM05D005165 ORTHO05D006361 6.4e-31 139.4 211 42.2
SGA_v2.0_scaffold4G01924 Striga asiatica HOM05D005165 ORTHO05D006361 6.4e-31 139.4 208 43.3
Aa31LG6G3830 Aethionema arabicum HOM05D005165 ORTHO05D006361 8.4e-31 139.0 212 39.6
Carub.0007s1958 Capsella rubella HOM05D005165 ORTHO05D006361 1.4e-30 138.3 207 40.6
Lj4g0017916 Lotus japonicus HOM05D005165 ORTHO05D006361 1.4e-30 138.3 209 40.2
RcHm_v2.0_Chr5g0003561 Rosa chinensis HOM05D005165 ORTHO05D006361 1.9e-30 137.9 211 40.3
TPR.G37081 Trifolium pratense HOM05D005165 ORTHO05D006361 1.9e-30 137.9 471 28.7
Thecc.06G218200 Theobroma cacao HOM05D005165 ORTHO05D006361 2.4e-30 137.5 398 31.2
Glyma.07G259400 Glycine max HOM05D005165 ORTHO05D006361 3.2e-30 137.1 209 43.5
Aqoxy1G03259 Aquilegia oxysepala HOM05D005165 ORTHO05D006361 4.2e-30 136.7 400 30.0
GSVIVG01004517001 Vitis vinifera HOM05D005165 ORTHO05D006361 4.2e-30 136.7 411 30.2
Ca_21091_v3 Cicer arietinum L. HOM05D005165 ORTHO05D006361 5.5e-30 136.3 207 40.6
Ca_30199_v3 Cicer arietinum L. HOM05D005165 ORTHO05D006361 5.5e-30 136.3 207 40.6
CSS0020297 Camellia sinensis var. sinensis HOM05D005165 ORTHO05D006361 9.3e-30 135.6 387 30.7
FvH4_3g02340 Fragaria vesca HOM05D005165 ORTHO05D006361 9.3e-30 135.6 205 40.5
Ah.09g235020 Amaranthus hybridus HOM05D005165 ORTHO05D006361 1.2e-29 135.2 393 29.5
Cpa.g.sc198.37 Carica papaya HOM05D005165 ORTHO05D006361 1.2e-29 135.2 392 31.1
Cc09_g01850 Coffea canephora HOM05D005165 ORTHO05D006361 1.2e-29 135.2 358 30.4
Sabra04G0009600 Salix brachista HOM05D005165 ORTHO05D006361 1.6e-29 134.8 446 29.8
ClCG03G004830 Citrullus lanatus HOM05D005165 ORTHO05D006361 2.1e-29 134.4 201 41.8
HanXRQChr05g0129591 Helianthus annuus HOM05D005165 ORTHO05D006361 2.1e-29 134.4 213 38.0
Sp7g19990 Schrenkiella parvula HOM05D005165 ORTHO05D006361 2.7e-29 134.0 208 39.9
Gorai.010G179700 Gossypium raimondii HOM05D005165 ORTHO05D006361 3.5e-29 133.7 213 40.4
Sopen02g025090 Solanum pennellii HOM05D005165 ORTHO05D006361 3.5e-29 133.7 211 42.2
AT4G21820 Arabidopsis thaliana HOM05D005165 ORTHO05D006361 4.6e-29 133.3 207 39.6
PGSC0003DMG400016486 Solanum tuberosum HOM05D005165 ORTHO05D006361 4.6e-29 133.3 211 41.2
FAN21G2432 Fragaria x ananassa HOM05D005165 ORTHO05D006361 6.0e-29 132.9 419 32.5
Gohir.D06G153700 Gossypium hirsutum HOM05D005165 ORTHO05D006361 6.0e-29 132.9 213 39.9
Lj2C270G14 Lonicera japonica HOM05D005165 ORTHO05D006361 6.0e-29 132.9 401 27.7
Sc17g0007260 Simmondsia chinensis HOM05D005165 ORTHO05D006361 1.3e-28 131.7 408 30.6
Gohir.A10G013700 Gossypium hirsutum HOM05D005165 ORTHO05D006361 2.3e-28 131.0 209 41.1
ECA236G1313 Erigeron canadensis HOM05D005165 ORTHO05D006361 3.0e-28 130.6 211 37.4
COL.COLO4_31753 Corchorus olitorius HOM05D005165 ORTHO05D006361 1.1e-27 128.6 202 40.6
DCAR_004209 Daucus carota HOM05D005165 ORTHO05D006361 1.5e-27 128.3 209 39.7
Prupe.4G023200 Prunus persica HOM05D005165 ORTHO05D006361 1.5e-27 128.3 200 40.5
Lsat_1_v5_gn_7_17640 Lactuca sativa HOM05D005165 ORTHO05D006361 1.9e-27 127.9 213 38.5
unitig_748.g7100 Utricularia gibba HOM05D005165 ORTHO05D006361 2.5e-27 127.5 208 40.9
Gohir.D10G013600 Gossypium hirsutum HOM05D005165 ORTHO05D006361 3.3e-27 127.1 210 41.0
Nitab4.5_0003254g0110 Nicotiana tabacum HOM05D005165 ORTHO05D006361 9.6e-27 125.6 210 42.4
CARHR228530 Cardamine hirsuta HOM05D005165 ORTHO05D006361 4.8e-26 123.2 212 38.7
Nitab4.5_0007482g0050 Nicotiana tabacum HOM05D005165 ORTHO05D006361 4.8e-26 123.2 207 41.5
Gorai.011G015400 Gossypium raimondii HOM05D005165 ORTHO05D006361 8.1e-26 122.5 411 30.2
Psat4g007280 Pisum sativum HOM05D005165 ORTHO05D006361 1.8e-25 121.3 211 36.0
MD10G1319300 Malus domestica HOM05D005165 ORTHO05D006361 4.0e-25 120.2 212 39.6
TWI63G0677 Tripterygium wilfordii HOM05D005165 ORTHO05D006361 6.9e-25 119.4 200 38.5
FAN21G3214 Fragaria x ananassa HOM05D005165 ORTHO05D006361 1.0e-23 115.5 225 36.4
CSS0012929 Camellia sinensis var. sinensis HOM05D005165 ORTHO05D006361 1.7e-23 114.8 425 26.8
FAN25G1001 Fragaria x ananassa HOM05D005165 ORTHO05D006361 3.8e-23 113.6 253 33.2
CSS0021361 Camellia sinensis var. sinensis HOM05D005165 ORTHO05D006361 9.3e-22 109.0 192 39.1
EL10Ac8g20027 Beta vulgaris HOM05D005165 ORTHO05D006361 8.7e-20 102.4 338 26.6
SEGI_17063 Sequoiadendron giganteum HOM05D005165 ORTHO05D006361 8.7e-20 102.4 213 35.7
CDE05G2160 Ceratophyllum demersum HOM05D005165 ORTHO05D006361 4.8e-18 96.7 193 32.1
ATR0752G007 Amborella trichopoda HOM05D005165 ORTHO05D006361 6.9e-17 92.8 140 44.3
QL05p073557 Quercus lobata HOM05D005165 ORTHO05D006361 2.0e-16 91.3 202 31.2
Pp3c24_1350 Physcomitrium patens HOM05D005165 ORTHO05D006361 1.4e-14 85.1 177 34.5
GSVIVG01002955001 Vitis vinifera HOM05D005165 ORTHO05D006361 6.1e-13 79.7 151 36.4
Mapoly0043s0047 Marchantia polymorpha HOM05D005165 ORTHO05D006361 2.3e-12 77.8 179 31.3
Solyc02g080400.3 Solanum lycopersicum HOM05D005165 ORTHO05D006361 3.9e-12 77.0 152 36.2
AagrBONN_evm.TU.Sc2ySwM_117.1637__1638 Anthoceros agrestis HOM05D005165 ORTHO05D006361 8.7e-12 75.9 177 32.2
CAN.G569.18 Capsicum annuum HOM05D005165 ORTHO05D006361 1.6e-10 71.6 129 37.2
SMO200G0122 Selaginella moellendorffii HOM05D005165 ORTHO05D006361 3.7e-10 70.5 189 30.7
SGA_v2.0_scaffold186G40236 Striga asiatica HOM05D005165 ORTHO05D006361 1.8e-09 68.2 109 37.6
AL7G32100 Arabidopsis lyrata HOM05D005165 ORTHO05D006361 4.1e-09 67.0 95 37.9
Solyc02g080390.2 Solanum lycopersicum HOM05D005165 ORTHO05D006361 5.9e-08 63.2 58 60.3
Os07g0517400 Oryza sativa ssp. japonica HOM05D005165 ORTHO05D006361 1.1e-06 58.9 131 34.4


User provided reference genes

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