Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_012227 Vanilla planifolia HOM05D004793 ORTHO05D004423 3.0e-54 214.9 108 100.0
HPP92_014035 Vanilla planifolia HOM05D004793 ORTHO05D004423 2.8e-12 75.5 118 43.2
Thecc.01G191000 Theobroma cacao HOM05D004793 ORTHO05D004423 1.7e-09 66.2 123 38.2
TAR627G0453 Trochodendron aralioides HOM05D004793 ORTHO05D004423 1.7e-09 66.2 117 37.6
Manes.03G138300 Manihot esculenta HOM05D004793 ORTHO05D004423 3.8e-09 65.1 126 36.5
Aqoxy4G02224 Aquilegia oxysepala HOM05D004793 ORTHO05D004423 1.5e-08 63.2 130 38.5
Duzib138G1142 Durio zibethinus HOM05D004793 ORTHO05D004423 1.5e-08 63.2 123 35.8
ATR0712G036 Amborella trichopoda HOM05D004793 ORTHO05D004423 1.9e-08 62.8 130 38.5
Nn1g03234 Nelumbo nucifera HOM05D004793 ORTHO05D004423 2.5e-08 62.4 126 35.7
GSVIVG01037785001 Vitis vinifera HOM05D004793 ORTHO05D004423 2.5e-08 62.4 120 37.5
Gohir.D13G138400 Gossypium hirsutum HOM05D004793 ORTHO05D004423 4.2e-08 61.6 120 36.7
Gorai.013G155000 Gossypium raimondii HOM05D004793 ORTHO05D004423 4.2e-08 61.6 120 36.7
TPR.G1320 Trifolium pratense HOM05D004793 ORTHO05D004423 5.5e-08 61.2 112 36.6
Cfa020226 Carpinus fangiana HOM05D004793 ORTHO05D004423 7.2e-08 60.8 101 39.6
Haze_09795 Corylus avellana HOM05D004793 ORTHO05D004423 7.2e-08 60.8 103 39.8
Potri.001G362000 Populus trichocarpa HOM05D004793 ORTHO05D004423 7.2e-08 60.8 124 38.7
Medtr5g097300 Medicago truncatula HOM05D004793 ORTHO05D004423 1.6e-07 59.7 112 35.7
Oeu057608.1 Olea europaea HOM05D004793 ORTHO05D004423 1.6e-07 59.7 114 42.1
Oeu064364.1 Olea europaea HOM05D004793 ORTHO05D004423 1.6e-07 59.7 114 42.1
GSVIVG01002881001 Vitis vinifera HOM05D000222 ORTHO05D003997 1.6e-07 59.7 131 35.1
Gohir.D01G074100 Gossypium hirsutum HOM05D004793 ORTHO05D004423 2.1e-07 59.3 123 37.4
Rhsim04G0038500 Rhododendron simsii HOM05D004793 ORTHO05D004423 2.7e-07 58.9 102 44.1
Thecc.07G019600 Theobroma cacao HOM05D004793 ORTHO05D004423 2.7e-07 58.9 124 37.1
Sabra14G0125700 Salix brachista HOM05D004793 ORTHO05D004423 4.7e-07 58.2 139 32.4
Cpa.g.sc211.5 Carica papaya HOM05D004793 ORTHO05D004423 8.0e-07 57.4 44 65.9
Manes.13G062900 Manihot esculenta HOM05D004793 ORTHO05D004423 1.0e-06 57.0 126 39.7
Nn1g07451 Nelumbo nucifera HOM05D004793 ORTHO05D004423 1.0e-06 57.0 122 34.4
COL.COLO4_08493 Corchorus olitorius HOM05D004793 ORTHO05D004423 1.4e-06 56.6 134 34.3
Gohir.A01G087700 Gossypium hirsutum HOM05D004793 ORTHO05D004423 1.4e-06 56.6 120 36.7
Manes.15G062700 Manihot esculenta HOM05D004793 ORTHO05D004423 1.4e-06 56.6 133 33.1
Psat2g004520 Pisum sativum HOM05D004793 ORTHO05D004423 1.4e-06 56.6 105 36.2
Sabra16G0013200 Salix brachista HOM05D004793 ORTHO05D004423 1.4e-06 56.6 135 37.0
Ciclev10010582m.g Citrus clementina HOM05D004793 ORTHO05D004423 1.8e-06 56.2 111 33.3
Duzib170G0463 Durio zibethinus HOM05D004793 ORTHO05D004423 1.8e-06 56.2 122 35.2
Duzib170G0743 Durio zibethinus HOM05D004793 ORTHO05D004423 1.8e-06 56.2 122 35.2
CSS0020838 Camellia sinensis var. sinensis HOM05D004793 ORTHO05D004423 2.3e-06 55.8 118 33.1
CSS0047668 Camellia sinensis var. sinensis HOM05D004793 ORTHO05D004423 2.3e-06 55.8 118 33.1
Psat1g178240 Pisum sativum HOM05D004793 ORTHO05D004423 3.0e-06 55.5 138 33.3
Rhsim04G0014600 Rhododendron simsii HOM05D004793 ORTHO05D004423 3.0e-06 55.5 116 38.8
Ca_06456_v3 Cicer arietinum L. HOM05D004793 ORTHO05D004423 4.0e-06 55.1 115 36.5
Duzib192G0740 Durio zibethinus HOM05D004793 ORTHO05D004423 4.0e-06 55.1 51 66.7
QL08p028591 Quercus lobata HOM05D004793 ORTHO05D004423 4.0e-06 55.1 120 32.5
Thecc.06G236700 Theobroma cacao HOM05D004793 ORTHO05D004423 4.0e-06 55.1 137 40.1
CDE04G0094 Ceratophyllum demersum HOM05D004793 ORTHO05D004423 5.2e-06 54.7 114 36.8
FAN21G3338 Fragaria x ananassa HOM05D017646 ORTHO05D004423 5.2e-06 54.7 119 34.5
Hma1.2p1_1825F.1_g304390 Hydrangea macrophylla HOM05D004793 ORTHO05D004423 5.2e-06 54.7 124 34.7
Manes.12G061300 Manihot esculenta HOM05D004793 ORTHO05D004423 5.2e-06 54.7 121 33.9
FAN25G0781 Fragaria x ananassa HOM05D017646 ORTHO05D004423 6.7e-06 54.3 114 36.0
FAN25G3449 Fragaria x ananassa HOM05D017646 ORTHO05D004423 6.7e-06 54.3 114 36.0
Gohir.D07G197000 Gossypium hirsutum HOM05D004793 ORTHO05D004423 6.7e-06 54.3 124 36.3
Gorai.001G220800 Gossypium raimondii HOM05D004793 ORTHO05D004423 6.7e-06 54.3 124 36.3
Hma1.2p1_0133F.1_g061430 Hydrangea macrophylla HOM05D004793 ORTHO05D004423 6.7e-06 54.3 121 33.1
Oeu063642.1 Olea europaea HOM05D004793 ORTHO05D004423 6.7e-06 54.3 117 37.6
Ciclev10017917m.g Citrus clementina HOM05D004793 ORTHO05D004423 8.8e-06 53.9 123 36.6
FvH4_3g24120 Fragaria vesca HOM05D017646 ORTHO05D004423 8.8e-06 53.9 114 36.0
FAN11G0385 Fragaria x ananassa HOM05D017646 ORTHO05D004423 8.8e-06 53.9 114 36.0
Gohir.A07G190700 Gossypium hirsutum HOM05D004793 ORTHO05D004423 8.8e-06 53.9 124 36.3
Lalb_Chr15g0088081 Lupinus albus HOM05D004793 ORTHO05D004423 8.8e-06 53.9 142 31.0


User provided reference genes

Program Settings