Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_012057 Vanilla planifolia HOM05D000666 ORTHO05D429163 1.1e-116 423.7 270 100.0
HPP92_003606 Vanilla planifolia HOM05D002236 ORTHO05D002341 2.7e-19 100.1 271 32.5
HPP92_001038 Vanilla planifolia HOM05D000666 ORTHO05D001727 7.1e-12 75.5 137 40.9
Prupe.6G241200 Prunus persica HOM05D000666 ORTHO05D001727 2.1e-11 73.9 292 26.7
Sabra16G0092300 Salix brachista HOM05D000666 ORTHO05D001727 2.7e-11 73.6 293 27.3
TAR636G1469 Trochodendron aralioides HOM05D000666 ORTHO05D001727 4.6e-11 72.8 267 26.6
CSS0026079 Camellia sinensis var. sinensis HOM05D000666 ORTHO05D001727 7.8e-11 72.0 264 26.9
CSS0049299 Camellia sinensis var. sinensis HOM05D000666 ORTHO05D001727 7.8e-11 72.0 264 26.9
CANSAT80G0496 Cannabis sativa HOM05D000666 ORTHO05D001727 1.0e-10 71.6 264 34.1
Thecc.09G261500 Theobroma cacao HOM05D000666 ORTHO05D001727 1.3e-10 71.2 303 26.7
Hund20172 Selenicereus undatus HOM05D000666 ORTHO05D001727 2.3e-10 70.5 264 36.7
Duzib150G1393 Durio zibethinus HOM05D000666 ORTHO05D001727 5.1e-10 69.3 263 26.2
Duzib168G0376 Durio zibethinus HOM05D000666 ORTHO05D001727 5.1e-10 69.3 323 26.6
Atru.chr8.2558 Acer truncatum HOM05D000666 ORTHO05D001727 6.6e-10 68.9 224 29.0
PSO063G3058 Papaver somniferum HOM05D000666 ORTHO05D001727 6.6e-10 68.9 261 29.1
Potri.016G085900 Populus trichocarpa HOM05D000666 ORTHO05D001727 6.6e-10 68.9 292 26.0
COL.COLO4_25260 Corchorus olitorius HOM05D000666 ORTHO05D001727 1.1e-09 68.2 290 24.8
DCAR_002495 Daucus carota HOM05D000666 ORTHO05D001727 1.1e-09 68.2 267 25.8
Lalb_Chr06g0171431 Lupinus albus HOM05D000666 ORTHO05D001727 1.1e-09 68.2 285 26.3
TWI77G0173 Tripterygium wilfordii HOM05D000666 ORTHO05D001727 1.1e-09 68.2 291 25.8
TAR633G2804 Trochodendron aralioides HOM05D000666 ORTHO05D001727 1.1e-09 68.2 286 27.3
Duzib170G0124 Durio zibethinus HOM05D000666 ORTHO05D001727 1.9e-09 67.4 298 26.5
Ciclev10011300m.g Citrus clementina HOM05D000666 ORTHO05D001727 2.5e-09 67.0 267 25.1
PSO339G6671 Papaver somniferum HOM05D000666 ORTHO05D001727 3.3e-09 66.6 261 28.7
Cpa.g.sc45.32 Carica papaya HOM05D000666 ORTHO05D001727 4.3e-09 66.2 261 26.8
Duzib106G0137 Durio zibethinus HOM05D000666 ORTHO05D001727 5.6e-09 65.9 261 24.5
Manes.08G003600 Manihot esculenta HOM05D000666 ORTHO05D001727 5.6e-09 65.9 286 26.2
Phvul.007G163800 Phaseolus vulgaris HOM05D000666 ORTHO05D001727 5.6e-09 65.9 263 25.9
Actinidia11224 Actinidia chinensis HOM05D000666 ORTHO05D001727 7.3e-09 65.5 267 25.8
DCAR_006038 Daucus carota HOM05D000666 ORTHO05D001727 7.3e-09 65.5 266 27.1
Gohir.A09G151900 Gossypium hirsutum HOM05D000666 ORTHO05D001727 7.3e-09 65.5 267 25.8
QL07p045248 Quercus lobata HOM05D000666 ORTHO05D001727 7.3e-09 65.5 260 26.9
Thecc.05G054100 Theobroma cacao HOM05D000666 ORTHO05D001727 7.3e-09 65.5 267 32.6
Glyma.13G137200 Glycine max HOM05D000666 ORTHO05D001727 9.6e-09 65.1 224 27.7
Sabra06G0103100 Salix brachista HOM05D000666 ORTHO05D001727 9.6e-09 65.1 288 24.7
HPP92_001037 Vanilla planifolia HOM05D000666 ORTHO05D001727 1.2e-08 64.7 133 34.6
Glyma.10G049600 Glycine max HOM05D000666 ORTHO05D001727 1.6e-08 64.3 263 24.0
Gorai.006G121200 Gossypium raimondii HOM05D000666 ORTHO05D001727 1.6e-08 64.3 297 26.3
Cfa011374 Carpinus fangiana HOM05D000666 ORTHO05D001727 2.1e-08 63.9 261 24.9
CiPaw.09G179900 Carya illinoinensis HOM05D000666 ORTHO05D001727 2.1e-08 63.9 293 26.3
Nn2g12997 Nelumbo nucifera HOM05D000666 ORTHO05D001727 2.8e-08 63.5 290 24.8
Cfa017510 Carpinus fangiana HOM05D000666 ORTHO05D001727 3.6e-08 63.2 294 26.5
Gohir.D09G102400 Gossypium hirsutum HOM05D000666 ORTHO05D001727 3.6e-08 63.2 297 25.9
RcHm_v2.0_Chr3g0468851 Rosa chinensis HOM05D000666 ORTHO05D001727 3.6e-08 63.2 296 25.0
VMungo0720G2549 Vigna mungo HOM05D000666 ORTHO05D001727 3.6e-08 63.2 263 24.7
Haze_23938 Corylus avellana HOM05D000666 ORTHO05D001727 4.7e-08 62.8 267 30.0
Duzib093G0204 Durio zibethinus HOM05D000666 ORTHO05D001727 4.7e-08 62.8 292 25.3
Lj5g0006568 Lotus japonicus HOM05D000666 ORTHO05D001727 4.7e-08 62.8 261 26.1
Duzib128G0466 Durio zibethinus HOM05D000666 ORTHO05D001727 6.2e-08 62.4 266 24.8
Gohir.A09G105600 Gossypium hirsutum HOM05D000666 ORTHO05D001727 6.2e-08 62.4 263 25.9
Gohir.D04G115700 Gossypium hirsutum HOM05D000666 ORTHO05D001727 6.2e-08 62.4 293 33.1
Gohir.D09G147500 Gossypium hirsutum HOM05D000666 ORTHO05D001727 6.2e-08 62.4 267 25.5
arahy.Tifrunner.gnm1.ann1.C2L54K Arachis hypogaea HOM05D000666 ORTHO05D001727 8.1e-08 62.0 224 28.6
arahy.Tifrunner.gnm1.ann1.HJ42P8 Arachis hypogaea HOM05D000666 ORTHO05D001727 8.1e-08 62.0 224 28.6
Gorai.006G168600 Gossypium raimondii HOM05D000666 ORTHO05D001727 1.4e-07 61.2 267 25.5
EL10Ac7g17354 Beta vulgaris HOM05D000666 ORTHO05D001727 1.8e-07 60.8 289 26.6
Gohir.A04G076700 Gossypium hirsutum HOM05D000666 ORTHO05D001727 1.8e-07 60.8 293 31.7
Potri.006G131400 Populus trichocarpa HOM05D000666 ORTHO05D001727 1.8e-07 60.8 291 24.4
Ca_08827_v3 Cicer arietinum L. HOM05D000666 ORTHO05D001727 2.4e-07 60.5 231 26.8
Gorai.009G420300 Gossypium raimondii HOM05D000666 ORTHO05D001727 2.4e-07 60.5 293 32.8
TAR369G0985 Trochodendron aralioides HOM05D000666 ORTHO05D001727 2.4e-07 60.5 286 25.5
CANSAT54G0448 Cannabis sativa HOM05D000666 ORTHO05D001727 3.1e-07 60.1 288 25.0
MD03G1110200 Malus domestica HOM05D000666 ORTHO05D001727 3.1e-07 60.1 263 25.1
CiPaw.13G106000 Carya illinoinensis HOM05D000666 ORTHO05D001727 5.2e-07 59.3 260 24.2
Prupe.6G092800 Prunus persica HOM05D000666 ORTHO05D001727 5.2e-07 59.3 290 27.2
Ah.01g014890 Amaranthus hybridus HOM05D000666 ORTHO05D001727 6.8e-07 58.9 292 25.3
Manes.09G080900 Manihot esculenta HOM05D000666 ORTHO05D001727 6.8e-07 58.9 293 24.2
QL01p036663 Quercus lobata HOM05D000666 ORTHO05D001727 6.8e-07 58.9 305 24.9
TWI74G0368 Tripterygium wilfordii HOM05D000666 ORTHO05D001727 6.8e-07 58.9 268 25.4
Nitab4.5_0005556g0010 Nicotiana tabacum HOM05D000666 ORTHO05D001727 8.9e-07 58.5 306 24.5
Atru.chr3.3717 Acer truncatum HOM05D000666 ORTHO05D001727 1.2e-06 58.2 227 26.9
Aqoxy4G03196 Aquilegia oxysepala HOM05D000666 ORTHO05D001727 1.2e-06 58.2 267 24.0
Eucgr.B02460 Eucalyptus grandis HOM05D000666 ORTHO05D001727 1.2e-06 58.2 268 30.6
MBI14_g17614_MAGBIO Magnolia biondii HOM05D000666 ORTHO05D001727 1.2e-06 58.2 224 27.7
Ah.04g151640 Amaranthus hybridus HOM05D000527 ORTHO05D000559 1.5e-06 57.8 263 36.1
Lj2C1038T4 Lonicera japonica HOM05D000666 ORTHO05D001727 2.0e-06 57.4 231 27.7
Nitab4.5_0000888g0210 Nicotiana tabacum HOM05D000666 ORTHO05D001727 2.0e-06 57.4 306 25.2
CSS0014481 Camellia sinensis var. sinensis HOM05D000666 ORTHO05D001727 2.6e-06 57.0 234 28.2
Hma1.2p1_0350F.1_g132750 Hydrangea macrophylla HOM05D000666 ORTHO05D001727 2.6e-06 57.0 260 26.5
Os05g0122600 Oryza sativa ssp. japonica HOM05D000666 ORTHO05D001727 2.6e-06 57.0 259 27.8
Peaxi162Scf00389g00623 Petunia axillaris HOM05D000666 ORTHO05D001727 2.6e-06 57.0 288 24.7
Glyma.15G044900 Glycine max HOM05D000666 ORTHO05D001727 4.4e-06 56.2 273 26.0
Cpa.g.sc318.2 Carica papaya HOM05D000666 ORTHO05D001727 5.8e-06 55.8 307 24.8
Lalb_Chr01g0019011 Lupinus albus HOM05D000666 ORTHO05D001727 5.8e-06 55.8 297 23.9
Nitab4.5_0000754g0110 Nicotiana tabacum HOM05D000666 ORTHO05D001727 5.8e-06 55.8 261 26.8
Peaxi162Scf00005g00455 Petunia axillaris HOM05D000666 ORTHO05D001727 5.8e-06 55.8 234 28.2
Sc21g0000080 Simmondsia chinensis HOM05D000666 ORTHO05D001727 5.8e-06 55.8 263 27.0
VMungo1080G0217 Vigna mungo HOM05D000666 ORTHO05D001727 7.6e-06 55.5 265 24.9
Lj1A183T51 Lonicera japonica HOM05D000666 ORTHO05D001727 9.9e-06 55.1 237 25.7


User provided reference genes

Program Settings