Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_011923 Vanilla planifolia HOM05D001186 ORTHO05D000971 3.9e-72 274.6 133 100.0
HPP92_027454 Vanilla planifolia HOM05D001186 ORTHO05D000971 9.5e-18 94.0 138 44.9
HPP92_016162 Vanilla planifolia HOM05D001186 ORTHO05D000971 1.3e-11 73.6 133 34.6
HPP92_011922 Vanilla planifolia HOM05D001186 ORTHO05D000971 8.6e-11 70.9 174 34.5
HPP92_026215 Vanilla planifolia HOM05D001186 ORTHO05D000971 1.1e-10 70.5 133 33.8
Oeu014479.1 Olea europaea HOM05D001186 ORTHO05D000971 2.5e-10 69.3 95 42.1
HPP92_000062 Vanilla planifolia HOM05D001186 ORTHO05D000971 3.3e-10 68.9 78 51.3
Oeu051260.1 Olea europaea HOM05D001186 ORTHO05D000971 5.6e-10 68.2 95 43.2
Nn1g06171 Nelumbo nucifera HOM05D001186 ORTHO05D000971 9.5e-10 67.4 102 43.1
Ca_16665_v3 Cicer arietinum L. HOM05D001186 ORTHO05D000971 1.2e-09 67.0 128 37.5
TPR.G33348 Trifolium pratense HOM05D000033 ORTHO05D001999 1.2e-09 67.0 66 50.0
FAN20G2326 Fragaria x ananassa HOM05D001186 ORTHO05D000971 3.6e-09 65.5 73 43.8
HPP92_001096 Vanilla planifolia HOM05D001186 ORTHO05D000971 3.6e-09 65.5 64 50.0
FvH4_2g14340 Fragaria vesca HOM05D001186 ORTHO05D000971 4.7e-09 65.1 73 43.8
FAN15G3153 Fragaria x ananassa HOM05D001186 ORTHO05D000971 4.7e-09 65.1 73 43.8
FAN24G3322 Fragaria x ananassa HOM05D001186 ORTHO05D000971 4.7e-09 65.1 73 43.8
FAN27G1120 Fragaria x ananassa HOM05D001186 ORTHO05D000971 4.7e-09 65.1 73 43.8
MD10G1018000 Malus domestica HOM05D001186 ORTHO05D000971 4.7e-09 65.1 85 43.5
Duzib093G1352 Durio zibethinus HOM05D001186 ORTHO05D000971 6.1e-09 64.7 90 38.9
Prupe.8G022500 Prunus persica HOM05D001186 ORTHO05D000971 6.1e-09 64.7 84 42.9
Duzib041G0538 Durio zibethinus HOM05D001186 ORTHO05D000971 1.0e-08 63.9 90 37.8
MD05G1018300 Malus domestica HOM05D001186 ORTHO05D000971 1.0e-08 63.9 85 42.4
RcHm_v2.0_Chr6g0276681 Rosa chinensis HOM05D001186 ORTHO05D000971 1.0e-08 63.9 73 45.2
Sed0010828 Sechium edule HOM05D001186 ORTHO05D000971 1.0e-08 63.9 117 35.0
Glyma.06G124400 Glycine max HOM05D001186 ORTHO05D000971 1.4e-08 63.5 72 45.8
Actinidia15150 Actinidia chinensis HOM05D001186 ORTHO05D000971 1.8e-08 63.2 67 52.2
HPP92_003212 Vanilla planifolia HOM05D001186 ORTHO05D000971 1.8e-08 63.2 80 47.5
VMungo1309G1275 Vigna mungo HOM05D001186 ORTHO05D000971 2.3e-08 62.8 71 46.5
Cfa018343 Carpinus fangiana HOM05D001186 ORTHO05D000971 3.1e-08 62.4 73 46.6
Phvul.009G136500 Phaseolus vulgaris HOM05D001186 ORTHO05D000971 3.1e-08 62.4 71 46.5
Haze_17728 Corylus avellana HOM05D001186 ORTHO05D000971 5.2e-08 61.6 73 46.6
Medtr1g028910 Medicago truncatula HOM05D001186 ORTHO05D000971 5.2e-08 61.6 74 43.2
Oeu032976.1 Olea europaea HOM05D001186 ORTHO05D000971 5.2e-08 61.6 75 45.3
PSO675G0766 Papaver somniferum HOM05D001186 ORTHO05D000971 5.2e-08 61.6 128 35.9
HanXRQChr02g0037451 Helianthus annuus HOM05D001186 ORTHO05D000971 6.8e-08 61.2 80 41.2
Thecc.08G146900 Theobroma cacao HOM05D001186 ORTHO05D000971 6.8e-08 61.2 90 41.1
Phvul.008G159700 Phaseolus vulgaris HOM05D001186 ORTHO05D000971 8.9e-08 60.8 89 41.6
SalBow7G3795 Salvia bowleyana HOM05D001186 ORTHO05D000971 8.9e-08 60.8 72 48.6
TWI60G0870 Tripterygium wilfordii HOM05D001186 ORTHO05D000971 8.9e-08 60.8 69 44.9
TAR381G0526 Trochodendron aralioides HOM05D001186 ORTHO05D000971 8.9e-08 60.8 85 43.5
CAN.G1664.1 Capsicum annuum HOM05D001186 ORTHO05D000971 1.5e-07 60.1 73 47.9
Duzib187G0304 Durio zibethinus HOM05D001186 ORTHO05D000971 1.5e-07 60.1 86 39.5
Oeu037616.1 Olea europaea HOM05D001186 ORTHO05D000971 1.5e-07 60.1 75 45.3
GSVIVG01001661001 Vitis vinifera HOM05D001186 ORTHO05D000971 1.5e-07 60.1 55 47.3
Glyma.04G239400 Glycine max HOM05D001186 ORTHO05D000971 2.0e-07 59.7 73 45.2
Psat5g080400 Pisum sativum HOM05D001186 ORTHO05D000971 2.0e-07 59.7 91 38.5
COL.COLO4_36019 Corchorus olitorius HOM05D001186 ORTHO05D000971 2.6e-07 59.3 81 40.7
MBI17_g11165_MAGBIO Magnolia biondii HOM05D001186 ORTHO05D000971 2.6e-07 59.3 74 47.3
Peaxi162Scf00051g00055 Petunia axillaris HOM05D001186 ORTHO05D000971 2.6e-07 59.3 69 46.4
Gohir.A02G108503 Gossypium hirsutum HOM05D001186 ORTHO05D000971 3.4e-07 58.9 96 37.5
Medtr3g090350 Medicago truncatula HOM05D001186 ORTHO05D000971 3.4e-07 58.9 78 44.9
Nitab4.5_0000427g0090 Nicotiana tabacum HOM05D001186 ORTHO05D000971 3.4e-07 58.9 73 46.6
QL02p024757 Quercus lobata HOM05D001186 ORTHO05D000971 3.4e-07 58.9 70 41.4
Gohir.D03G070700 Gossypium hirsutum HOM05D001186 ORTHO05D000971 4.4e-07 58.5 94 37.2
Gorai.003G089500 Gossypium raimondii HOM05D001186 ORTHO05D000971 4.4e-07 58.5 94 37.2
Lsat_1_v5_gn_1_8801 Lactuca sativa HOM05D001186 ORTHO05D000971 4.4e-07 58.5 84 36.9
TPR.G18777 Trifolium pratense HOM05D001186 ORTHO05D000971 4.4e-07 58.5 80 43.8
Aqoxy6G00387 Aquilegia oxysepala HOM05D001186 ORTHO05D000971 5.8e-07 58.2 78 44.9
Lj1g0004766 Lotus japonicus HOM05D001186 ORTHO05D000971 5.8e-07 58.2 71 47.9
Lalb_Chr11g0066501 Lupinus albus HOM05D001186 ORTHO05D000971 5.8e-07 58.2 65 43.1
Nitab4.5_0000299g0270 Nicotiana tabacum HOM05D001186 ORTHO05D000971 5.8e-07 58.2 73 46.6
CiPaw.16G016300 Carya illinoinensis HOM05D001186 ORTHO05D000971 7.5e-07 57.8 83 41.0
Sed0025511 Sechium edule HOM05D001186 ORTHO05D000971 7.5e-07 57.8 66 47.0
Thecc.05G110300 Theobroma cacao HOM05D001186 ORTHO05D000971 7.5e-07 57.8 92 35.9
DCAR_014416 Daucus carota HOM05D001186 ORTHO05D000971 9.8e-07 57.4 72 45.8
DCAR_014417 Daucus carota HOM05D001186 ORTHO05D000971 9.8e-07 57.4 72 45.8
DCAR_026737 Daucus carota HOM05D001186 ORTHO05D000971 9.8e-07 57.4 83 38.6
Duzib116G0881 Durio zibethinus HOM05D001186 ORTHO05D000971 9.8e-07 57.4 70 42.9
Nitab4.5_0000633g0120 Nicotiana tabacum HOM05D001186 ORTHO05D000971 9.8e-07 57.4 74 44.6
Sabra05G0144600 Salix brachista HOM05D001186 ORTHO05D000971 9.8e-07 57.4 74 43.2
Sopen04g026910 Solanum pennellii HOM05D001186 ORTHO05D000971 9.8e-07 57.4 73 46.6
PGSC0003DMG400017564 Solanum tuberosum HOM05D001186 ORTHO05D000971 9.8e-07 57.4 79 44.3
Zm00001eb259970 Zea mays HOM05D001186 ORTHO05D000971 1.3e-06 57.0 68 45.6
Peaxi162Scf00263g00083 Petunia axillaris HOM05D001186 ORTHO05D000971 1.7e-06 56.6 75 45.3
TAR628G0442 Trochodendron aralioides HOM05D001186 ORTHO05D000971 1.7e-06 56.6 64 51.6
ATR0772G190 Amborella trichopoda HOM05D001186 ORTHO05D000971 2.2e-06 56.2 108 33.3
Duzib264G1003 Durio zibethinus HOM05D001186 ORTHO05D000971 2.2e-06 56.2 88 36.4
Lalb_Chr21g0308871 Lupinus albus HOM05D001186 ORTHO05D000971 2.2e-06 56.2 93 37.6
QL06p036159 Quercus lobata HOM05D001186 ORTHO05D000971 2.2e-06 56.2 67 43.3
QL07p026339 Quercus lobata HOM05D001186 ORTHO05D000971 2.2e-06 56.2 67 43.3
arahy.Tifrunner.gnm1.ann1.XR04TG Arachis hypogaea HOM05D001186 ORTHO05D000971 2.9e-06 55.8 80 37.5
CsaV3_6G030890 Cucumis sativus L. HOM05D001186 ORTHO05D000971 2.9e-06 55.8 64 46.9
Manes.02G176600 Manihot esculenta HOM05D001186 ORTHO05D000971 2.9e-06 55.8 71 40.8
Phvul.009G148500 Phaseolus vulgaris HOM05D001186 ORTHO05D000971 2.9e-06 55.8 72 41.7
VMungo1309G2779 Vigna mungo HOM05D001186 ORTHO05D000971 2.9e-06 55.8 74 39.2
AL3G32010 Arabidopsis lyrata HOM05D001186 ORTHO05D000971 3.7e-06 55.5 77 39.0
AL3G32030 Arabidopsis lyrata HOM05D001186 ORTHO05D000971 3.7e-06 55.5 77 39.0
AT3G18690 Arabidopsis thaliana HOM05D001186 ORTHO05D000971 3.7e-06 55.5 77 39.0
CSS0038492 Camellia sinensis var. sinensis HOM05D001186 ORTHO05D000971 3.7e-06 55.5 74 43.2
MELO3C027191.2 Cucumis melo HOM05D001186 ORTHO05D000971 3.7e-06 55.5 63 46.0
CsaV3_5G034400 Cucumis sativus L. HOM05D001186 ORTHO05D000971 3.7e-06 55.5 63 42.9
Hma1.2p1_0483F.1_g162740 Hydrangea macrophylla HOM05D001186 ORTHO05D000971 3.7e-06 55.5 70 44.3
Lalb_Chr23g0271401 Lupinus albus HOM05D001186 ORTHO05D000971 3.7e-06 55.5 94 40.4
Potri.005G189300 Populus trichocarpa HOM05D001186 ORTHO05D000971 3.7e-06 55.5 75 38.7
TAR579G0002 Trochodendron aralioides HOM05D001186 ORTHO05D000971 3.7e-06 55.5 66 48.5
ClCG08G006550 Citrullus lanatus HOM05D001186 ORTHO05D000971 4.9e-06 55.1 90 37.8
Potri.005G057800 Populus trichocarpa HOM05D001186 ORTHO05D000971 4.9e-06 55.1 64 43.8
CARHR094070 Cardamine hirsuta HOM05D001186 ORTHO05D000971 6.4e-06 54.7 77 39.0
COL.COLO4_14006 Corchorus olitorius HOM05D001186 ORTHO05D000971 6.4e-06 54.7 76 40.8
DCAR_001357 Daucus carota HOM05D001186 ORTHO05D000971 6.4e-06 54.7 60 48.3
Glyma.04G214700 Glycine max HOM05D001186 ORTHO05D000971 6.4e-06 54.7 76 38.2
Medtr8g093335 Medicago truncatula HOM05D001186 ORTHO05D000971 6.4e-06 54.7 74 39.2
Medtr8g093390 Medicago truncatula HOM05D001186 ORTHO05D000971 6.4e-06 54.7 74 39.2
Nitab4.5_0006679g0010 Nicotiana tabacum HOM05D001186 ORTHO05D000971 6.4e-06 54.7 74 43.2
EL10Ac1g01490 Beta vulgaris HOM05D001186 ORTHO05D000971 8.3e-06 54.3 75 40.0
Eucgr.F02723 Eucalyptus grandis HOM05D001186 ORTHO05D000971 8.3e-06 54.3 96 38.5
Glyma.06G151400 Glycine max HOM05D001186 ORTHO05D000971 8.3e-06 54.3 77 37.7
Glyma.14G124800 Glycine max HOM05D001186 ORTHO05D000971 8.3e-06 54.3 73 42.5
Manes.08G037400 Manihot esculenta HOM05D001186 ORTHO05D000971 8.3e-06 54.3 64 45.3
Nn5g28668 Nelumbo nucifera HOM05D001186 ORTHO05D000971 8.3e-06 54.3 74 44.6
Potri.002G070600 Populus trichocarpa HOM05D001186 ORTHO05D000971 8.3e-06 54.3 75 38.7
Sabra02G0055300 Salix brachista HOM05D001186 ORTHO05D000971 8.3e-06 54.3 75 38.7
Sed0028138 Sechium edule HOM05D001186 ORTHO05D000971 8.3e-06 54.3 93 34.4


User provided reference genes

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