Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_011921 Vanilla planifolia HOM05D001186 ORTHO05D000971 2.7e-74 282.0 145 100.0
GSVIVG01001661001 Vitis vinifera HOM05D001186 ORTHO05D000971 2.6e-21 105.9 154 47.4
Nn5g28668 Nelumbo nucifera HOM05D001186 ORTHO05D000971 5.5e-19 98.2 159 43.4
MBI17_g11165_MAGBIO Magnolia biondii HOM05D001186 ORTHO05D000971 2.7e-18 95.9 159 43.4
Aqoxy6G00387 Aquilegia oxysepala HOM05D001186 ORTHO05D000971 4.6e-18 95.1 157 45.9
TAR381G0526 Trochodendron aralioides HOM05D001186 ORTHO05D000971 1.8e-17 93.2 114 47.4
COL.COLO4_36019 Corchorus olitorius HOM05D001186 ORTHO05D000971 2.3e-17 92.8 161 40.4
Lj7P367T19 Lonicera japonica HOM05D001186 ORTHO05D000971 8.7e-17 90.9 142 44.4
Gohir.D03G070700 Gossypium hirsutum HOM05D001186 ORTHO05D000971 2.5e-16 89.4 168 41.1
Gorai.003G089500 Gossypium raimondii HOM05D001186 ORTHO05D000971 5.7e-16 88.2 168 41.1
TAR628G0442 Trochodendron aralioides HOM05D001186 ORTHO05D000971 7.4e-16 87.8 158 43.0
Oeu014479.1 Olea europaea HOM05D001186 ORTHO05D000971 2.2e-15 86.3 159 41.5
Gohir.A02G108503 Gossypium hirsutum HOM05D001186 ORTHO05D000971 2.8e-15 85.9 168 40.5
Haze_25129 Corylus avellana HOM05D001186 ORTHO05D000971 6.3e-15 84.7 147 43.5
QL06p029571 Quercus lobata HOM05D001186 ORTHO05D000971 1.4e-14 83.6 157 39.5
Nn1g06171 Nelumbo nucifera HOM05D001186 ORTHO05D000971 1.8e-14 83.2 172 40.7
Oeu051260.1 Olea europaea HOM05D001186 ORTHO05D000971 2.4e-14 82.8 168 39.9
Potri.002G070600 Populus trichocarpa HOM05D001186 ORTHO05D000971 2.4e-14 82.8 161 37.9
TAR579G0002 Trochodendron aralioides HOM05D001186 ORTHO05D000971 2.4e-14 82.8 146 40.4
Duzib116G0881 Durio zibethinus HOM05D001186 ORTHO05D000971 5.3e-14 81.6 171 40.4
PSO675G0766 Papaver somniferum HOM05D001186 ORTHO05D000971 6.9e-14 81.3 169 37.9
Sabra02G0055300 Salix brachista HOM05D001186 ORTHO05D000971 9.0e-14 80.9 161 38.5
CiPaw.16G016300 Carya illinoinensis HOM05D001186 ORTHO05D000971 1.2e-13 80.5 166 40.4
Manes.02G176600 Manihot esculenta HOM05D001186 ORTHO05D000971 1.2e-13 80.5 157 39.5
SalBow7G3795 Salvia bowleyana HOM05D001186 ORTHO05D000971 1.2e-13 80.5 152 39.5
CANSAT01G2763 Cannabis sativa HOM05D001186 ORTHO05D000971 2.0e-13 79.7 157 45.9
Cfa002833 Carpinus fangiana HOM05D001186 ORTHO05D000971 2.0e-13 79.7 147 42.2
PSO541G5231 Papaver somniferum HOM05D001186 ORTHO05D000971 2.0e-13 79.7 171 37.4
CAN.G62.47 Capsicum annuum HOM05D001186 ORTHO05D000971 3.4e-13 79.0 161 40.4
Manes.18G089366 Manihot esculenta HOM05D001186 ORTHO05D000971 4.5e-13 78.6 153 41.2
Solyc06g060470.1 Solanum lycopersicum HOM05D001186 ORTHO05D000971 4.5e-13 78.6 163 38.7
CSS0038492 Camellia sinensis var. sinensis HOM05D001186 ORTHO05D000971 1.0e-12 77.4 154 39.0
Potri.005G189300 Populus trichocarpa HOM05D001186 ORTHO05D000971 1.3e-12 77.0 166 38.6
Atru.chr13.2242 Acer truncatum HOM05D001186 ORTHO05D000971 3.8e-12 75.5 136 40.4
HPP92_011922 Vanilla planifolia HOM05D001186 ORTHO05D000971 3.8e-12 75.5 132 39.4
Lsat_1_v5_gn_1_8801 Lactuca sativa HOM05D001186 ORTHO05D000971 8.5e-12 74.3 157 37.6
Oeu032976.1 Olea europaea HOM05D001186 ORTHO05D000971 8.5e-12 74.3 153 36.6
Sabra05G0144600 Salix brachista HOM05D001186 ORTHO05D000971 8.5e-12 74.3 153 41.2
Ca_28450_v3 Cicer arietinum L. HOM05D001186 ORTHO05D000971 1.4e-11 73.6 141 44.0
CiPaw.03G128100 Carya illinoinensis HOM05D001186 ORTHO05D000971 1.9e-11 73.2 146 39.7
Duzib264G1003 Durio zibethinus HOM05D001186 ORTHO05D000971 3.2e-11 72.4 138 40.6
Oeu046011.1 Olea europaea HOM05D001186 ORTHO05D000971 3.2e-11 72.4 160 34.4
Duzib147G0658 Durio zibethinus HOM05D001186 ORTHO05D000971 4.2e-11 72.0 133 45.1
PGR119G0869 Punica granatum HOM05D001186 ORTHO05D000971 4.2e-11 72.0 149 42.3
HanXRQChr02g0037451 Helianthus annuus HOM05D001186 ORTHO05D000971 5.5e-11 71.6 161 41.6
Cc10_g14190 Coffea canephora HOM05D001186 ORTHO05D000971 7.2e-11 71.2 169 39.1
TAR376G0474 Trochodendron aralioides HOM05D001186 ORTHO05D000971 7.2e-11 71.2 138 41.3
Hma1.2p1_0006F.1_g004610 Hydrangea macrophylla HOM05D001186 ORTHO05D000971 9.4e-11 70.9 150 38.7
Oeu037616.1 Olea europaea HOM05D001186 ORTHO05D000971 1.2e-10 70.5 160 33.8
Nitab4.5_0000299g0270 Nicotiana tabacum HOM05D001186 ORTHO05D000971 1.6e-10 70.1 181 38.7
CiPaw.04G086200 Carya illinoinensis HOM05D001186 ORTHO05D000971 2.1e-10 69.7 147 41.5
TPR.G29601 Trifolium pratense HOM05D001186 ORTHO05D000971 6.1e-10 68.2 140 42.1
CSS0020698 Camellia sinensis var. sinensis HOM05D001186 ORTHO05D000971 7.9e-10 67.8 159 39.0
Os04g0417600 Oryza sativa ssp. japonica HOM05D001186 ORTHO05D000971 1.8e-09 66.6 158 35.4
Thecc.01G125600 Theobroma cacao HOM05D001186 ORTHO05D000971 1.8e-09 66.6 148 38.5
COL.COLO4_14006 Corchorus olitorius HOM05D001186 ORTHO05D000971 2.3e-09 66.2 142 40.8
Medtr8g093335 Medicago truncatula HOM05D001186 ORTHO05D000971 3.0e-09 65.9 140 41.4
Medtr8g093390 Medicago truncatula HOM05D001186 ORTHO05D000971 3.0e-09 65.9 140 41.4
Rhsim08G0003200 Rhododendron simsii HOM05D001186 ORTHO05D000971 3.0e-09 65.9 151 35.8
Gohir.A12G001200 Gossypium hirsutum HOM05D001186 ORTHO05D000971 3.9e-09 65.5 145 38.6
Gohir.D12G000900 Gossypium hirsutum HOM05D001186 ORTHO05D000971 5.1e-09 65.1 147 37.4
Psat7g047880 Pisum sativum HOM05D001186 ORTHO05D000971 5.1e-09 65.1 139 40.3
Manes.12G152600 Manihot esculenta HOM05D001186 ORTHO05D000971 6.7e-09 64.7 150 39.3
Eucgr.F02723 Eucalyptus grandis HOM05D001186 ORTHO05D000971 8.8e-09 64.3 156 37.2
Prupe.2G000100 Prunus persica HOM05D001186 ORTHO05D000971 1.1e-08 63.9 159 37.7
Actinidia15150 Actinidia chinensis HOM05D001186 ORTHO05D000971 1.5e-08 63.5 125 37.6
CDE06G1589 Ceratophyllum demersum HOM05D001186 ORTHO05D000971 2.0e-08 63.2 152 36.2
Gorai.011G116000 Gossypium raimondii HOM05D001186 ORTHO05D000971 2.0e-08 63.2 144 35.4
Lj4g0024168 Lotus japonicus HOM05D001186 ORTHO05D000971 2.5e-08 62.8 142 35.2
Duzib187G0304 Durio zibethinus HOM05D001186 ORTHO05D000971 4.3e-08 62.0 139 38.8
Nitab4.5_0002121g0030 Nicotiana tabacum HOM05D001186 ORTHO05D000971 4.3e-08 62.0 101 43.6
Sc07g0001670 Simmondsia chinensis HOM05D001186 ORTHO05D000971 4.3e-08 62.0 142 37.3
DCAR_014345 Daucus carota HOM05D001186 ORTHO05D000971 5.7e-08 61.6 135 40.7
Migut.C01025 Erythranthe guttata HOM05D001186 ORTHO05D000971 7.4e-08 61.2 159 36.5
Cc07_g17900 Coffea canephora HOM05D001186 ORTHO05D000971 9.7e-08 60.8 154 37.0
Gohir.D10G106100 Gossypium hirsutum HOM05D001186 ORTHO05D000971 9.7e-08 60.8 144 34.7
HanXRQChr04g0109411 Helianthus annuus HOM05D001186 ORTHO05D000971 9.7e-08 60.8 154 36.4
Cpa.g.sc42.113 Carica papaya HOM05D001186 ORTHO05D000971 1.3e-07 60.5 146 39.7
Ciclev10002106m.g Citrus clementina HOM05D001186 ORTHO05D000971 1.3e-07 60.5 79 46.8
Glyma.05G190000 Glycine max HOM05D001186 ORTHO05D000971 1.3e-07 60.5 143 39.9
Oeu024887.1 Olea europaea HOM05D001186 ORTHO05D000971 1.3e-07 60.5 150 38.7
PGR042G2791 Punica granatum HOM05D001186 ORTHO05D000971 1.7e-07 60.1 166 33.1
CDE08G0005 Ceratophyllum demersum HOM05D001186 ORTHO05D000971 3.7e-07 58.9 144 35.4
Sed0011999 Sechium edule HOM05D001186 ORTHO05D000971 3.7e-07 58.9 147 37.4
HPP92_026215 Vanilla planifolia HOM05D001186 ORTHO05D000971 4.8e-07 58.5 114 39.5
Dinv25835 Davidia involucrata HOM05D001186 ORTHO05D000971 6.3e-07 58.2 113 39.8
Nitab4.5_0004813g0010 Nicotiana tabacum HOM05D001186 ORTHO05D000971 6.3e-07 58.2 101 41.6
THA.LOC104812050 Tarenaya hassleriana HOM05D001186 ORTHO05D000971 1.1e-06 57.4 159 36.5
MELO3C023257.2 Cucumis melo HOM05D001186 ORTHO05D000971 1.4e-06 57.0 147 39.5
Potri.007G110100 Populus trichocarpa HOM05D001186 ORTHO05D000971 1.4e-06 57.0 150 37.3
Peaxi162Scf00051g00055 Petunia axillaris HOM05D001186 ORTHO05D000971 1.8e-06 56.6 130 39.2
Sc20g0003400 Simmondsia chinensis HOM05D001186 ORTHO05D000971 1.8e-06 56.6 154 36.4
FAN15G3153 Fragaria x ananassa HOM05D001186 ORTHO05D000971 2.4e-06 56.2 157 34.4
Glyma.13G039800 Glycine max HOM05D001186 ORTHO05D000971 2.4e-06 56.2 170 32.4
Lalb_Chr13g0296541 Lupinus albus HOM05D001186 ORTHO05D000971 2.4e-06 56.2 141 40.4
Glyma.04G239400 Glycine max HOM05D001186 ORTHO05D000971 4.1e-06 55.5 169 36.7
VMungo1309G2779 Vigna mungo HOM05D001186 ORTHO05D000971 4.1e-06 55.5 140 35.7
Ciclev10026434m.g Citrus clementina HOM05D001186 ORTHO05D000971 5.3e-06 55.1 154 34.4
CsaV3_2G018150 Cucumis sativus L. HOM05D001186 ORTHO05D000971 5.3e-06 55.1 147 38.8
Peaxi162Scf00012g00206 Petunia axillaris HOM05D001186 ORTHO05D000971 6.9e-06 54.7 89 47.2
unitig_899.g14702 Utricularia gibba HOM05D001186 ORTHO05D000971 6.9e-06 54.7 146 37.7
Phvul.009G136500 Phaseolus vulgaris HOM05D001186 ORTHO05D000971 9.1e-06 54.3 174 33.9
VMungo0251G0634 Vigna mungo HOM05D001186 ORTHO05D000971 9.1e-06 54.3 139 38.1


User provided reference genes

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