Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_011908 Vanilla planifolia HOM05D005110 ORTHO05D006074 2.1e-61 238.8 116 100.0
Duzib170G1118 Durio zibethinus HOM05D005110 ORTHO05D006074 9.1e-25 117.1 119 51.3
Thecc.09G280200 Theobroma cacao HOM05D005110 ORTHO05D006074 9.1e-25 117.1 119 52.9
COL.COLO4_34021 Corchorus olitorius HOM05D005110 ORTHO05D006074 1.6e-24 116.3 119 53.8
Glyma.13G315400 Glycine max HOM05D005110 ORTHO05D006074 3.5e-24 115.2 116 51.7
Dinv42535 Davidia involucrata HOM05D005110 ORTHO05D006074 5.9e-24 114.4 117 53.0
Duzib150G1383 Durio zibethinus HOM05D005110 ORTHO05D006074 5.9e-24 114.4 119 53.8
Dinv22825 Davidia involucrata HOM05D005110 ORTHO05D006074 1.0e-23 113.6 117 52.1
Duzib168G1438 Durio zibethinus HOM05D005110 ORTHO05D006074 2.2e-23 112.5 119 50.4
Cc01_g08910 Coffea canephora HOM05D005110 ORTHO05D006074 2.9e-23 112.1 116 51.7
VMungo1080G1295 Vigna mungo HOM05D005110 ORTHO05D006074 8.5e-23 110.5 118 50.0
Gohir.A05G079700 Gossypium hirsutum HOM05D005110 ORTHO05D006074 1.1e-22 110.2 118 52.5
Nn2g14215 Nelumbo nucifera HOM05D005110 ORTHO05D006074 1.1e-22 110.2 120 50.8
Prupe.6G134300 Prunus persica HOM05D005110 ORTHO05D006074 1.1e-22 110.2 114 47.4
Ciclev10029378m.g Citrus clementina HOM05D005110 ORTHO05D006074 1.9e-22 109.4 117 51.3
PGR102G3267 Punica granatum HOM05D005110 ORTHO05D006074 2.5e-22 109.0 120 48.3
GSVIVG01036094001 Vitis vinifera HOM05D005110 ORTHO05D006074 3.2e-22 108.6 115 50.4
Manes.11G163300 Manihot esculenta HOM05D005110 ORTHO05D006074 4.2e-22 108.2 119 47.1
FAN11G1413 Fragaria x ananassa HOM05D005110 ORTHO05D006074 5.5e-22 107.8 120 50.0
TPR.G17227 Trifolium pratense HOM05D005110 ORTHO05D006074 5.5e-22 107.8 113 50.4
FvH4_3g25370 Fragaria vesca HOM05D005110 ORTHO05D006074 7.2e-22 107.5 120 50.0
FAN21G3897 Fragaria x ananassa HOM05D005110 ORTHO05D006074 7.2e-22 107.5 120 50.0
MD03G1148100 Malus domestica HOM05D005110 ORTHO05D006074 9.4e-22 107.1 120 45.8
FAN25G3715 Fragaria x ananassa HOM05D005110 ORTHO05D006074 2.1e-21 105.9 120 50.0
Glyma.12G091100 Glycine max HOM05D005110 ORTHO05D006074 2.1e-21 105.9 115 49.6
Gohir.D05G082600 Gossypium hirsutum HOM05D005110 ORTHO05D006074 2.7e-21 105.5 118 50.8
Gorai.009G084200 Gossypium raimondii HOM05D005110 ORTHO05D006074 2.7e-21 105.5 118 50.8
MBI17_g32417_MAGBIO Magnolia biondii HOM05D005110 ORTHO05D006074 2.7e-21 105.5 124 47.6
Glyma.11G182100 Glycine max HOM05D005110 ORTHO05D006074 3.6e-21 105.1 116 49.1
Lsat_1_v5_gn_1_59041 Lactuca sativa HOM05D005110 ORTHO05D006074 6.1e-21 104.4 114 47.4
Lj3g0016581 Lotus japonicus HOM05D005110 ORTHO05D006074 6.1e-21 104.4 121 50.4
Psat7g142160 Pisum sativum HOM05D005110 ORTHO05D006074 8.0e-21 104.0 117 47.9
CANSAT54G0919 Cannabis sativa HOM05D005110 ORTHO05D006074 1.0e-20 103.6 116 49.1
Phvul.005G122600 Phaseolus vulgaris HOM05D005110 ORTHO05D006074 1.4e-20 103.2 116 49.1
Rhsim01G0204600 Rhododendron simsii HOM05D005110 ORTHO05D006074 1.4e-20 103.2 122 47.5
arahy.Tifrunner.gnm1.ann1.EYNG7S Arachis hypogaea HOM05D005110 ORTHO05D006074 1.8e-20 102.8 113 50.4
TAR369G1010 Trochodendron aralioides HOM05D005110 ORTHO05D006074 1.8e-20 102.8 123 48.0
arahy.Tifrunner.gnm1.ann1.XFIF97 Arachis hypogaea HOM05D005110 ORTHO05D006074 3.0e-20 102.1 113 50.4
Lalb_Chr01g0004911 Lupinus albus HOM05D005110 ORTHO05D006074 3.0e-20 102.1 115 47.8
Medtr2g086680 Medicago truncatula HOM05D005110 ORTHO05D006074 3.0e-20 102.1 114 47.4
Phvul.011G095400 Phaseolus vulgaris HOM05D005110 ORTHO05D006074 3.0e-20 102.1 113 49.6
Lj3g0002892 Lotus japonicus HOM05D005110 ORTHO05D006074 5.2e-20 101.3 115 45.2
Lalb_Chr03g0028181 Lupinus albus HOM05D005110 ORTHO05D006074 5.2e-20 101.3 116 47.4
Oeu027156.1 Olea europaea HOM05D005110 ORTHO05D006074 6.8e-20 100.9 116 48.3
QL01p011992 Quercus lobata HOM05D005110 ORTHO05D006074 6.8e-20 100.9 119 47.9
Actinidia37076 Actinidia chinensis HOM05D005110 ORTHO05D006074 8.8e-20 100.5 117 47.0
VMungo1127G0906 Vigna mungo HOM05D005110 ORTHO05D006074 1.2e-19 100.1 116 48.3
DCAR_010338 Daucus carota HOM05D005110 ORTHO05D006074 1.5e-19 99.8 116 47.4
ECA248G3565 Erigeron canadensis HOM05D005110 ORTHO05D006074 1.5e-19 99.8 120 48.3
MD11G1167600 Malus domestica HOM05D005110 ORTHO05D006074 2.0e-19 99.4 116 44.0
Potri.009G019300 Populus trichocarpa HOM05D005110 ORTHO05D006074 2.0e-19 99.4 117 47.9
Aqoxy4G02728 Aquilegia oxysepala HOM05D005110 ORTHO05D006074 2.6e-19 99.0 122 48.4
HanXRQChr01g0024471 Helianthus annuus HOM05D005110 ORTHO05D006074 2.6e-19 99.0 120 48.3
HanXRQChr13g0426031 Helianthus annuus HOM05D005110 ORTHO05D006074 2.6e-19 99.0 120 45.8
CSS0022586 Camellia sinensis var. sinensis HOM05D005110 ORTHO05D006074 3.4e-19 98.6 119 48.7
Oeu035569.1 Olea europaea HOM05D005110 ORTHO05D006074 4.4e-19 98.2 120 45.8
Eucgr.B03836 Eucalyptus grandis HOM05D005110 ORTHO05D006074 5.7e-19 97.8 95 52.6
Hma1.2p1_0587F.1_g184070 Hydrangea macrophylla HOM05D005110 ORTHO05D006074 7.5e-19 97.4 119 47.1
Sabra09G0012800 Salix brachista HOM05D005110 ORTHO05D006074 7.5e-19 97.4 118 46.6
Actinidia25117 Actinidia chinensis HOM05D005110 ORTHO05D006074 9.7e-19 97.1 120 47.5
QL01p011978 Quercus lobata HOM05D005110 ORTHO05D006074 1.3e-18 96.7 121 47.1
vmacro14345 Vaccinium macrocarpon HOM05D005110 ORTHO05D006074 1.3e-18 96.7 131 43.5
MSTRG.21034 Avicennia marina HOM05D005110 ORTHO05D006074 2.2e-18 95.9 117 47.0
Cpa.g.sc195.13 Carica papaya HOM05D005110 ORTHO05D006074 2.2e-18 95.9 114 46.5
CiPaw.13G134200 Carya illinoinensis HOM05D005110 ORTHO05D006074 2.2e-18 95.9 121 47.9
PGSC0003DMG400005884 Solanum tuberosum HOM05D005110 ORTHO05D006074 2.2e-18 95.9 115 44.3
TWI79G0870 Tripterygium wilfordii HOM05D005110 ORTHO05D006074 3.7e-18 95.1 114 45.6
A07p18150 Brassica napus HOM05D005110 ORTHO05D006074 4.8e-18 94.7 115 49.6
Cfa009996 Carpinus fangiana HOM05D005110 ORTHO05D006074 4.8e-18 94.7 118 46.6
Lalb_Chr19g0136401 Lupinus albus HOM05D005110 ORTHO05D006074 6.3e-18 94.4 116 48.3
CAN.G919.35 Capsicum annuum HOM05D005110 ORTHO05D006074 8.3e-18 94.0 117 43.6
Atru.chr3.3190 Acer truncatum HOM05D005110 ORTHO05D006074 1.1e-17 93.6 121 46.3
vmacro03324 Vaccinium macrocarpon HOM05D005110 ORTHO05D006074 1.1e-17 93.6 121 43.8
BcaB02g10088 Brassica carinata HOM05D005110 ORTHO05D006074 1.4e-17 93.2 115 48.7
CiPaw.14G098700 Carya illinoinensis HOM05D005110 ORTHO05D006074 1.4e-17 93.2 116 44.8
QL01p011973 Quercus lobata HOM05D005110 ORTHO05D006074 1.8e-17 92.8 118 45.8
BraA07t29533Z Brassica rapa HOM05D005110 ORTHO05D006074 2.4e-17 92.4 115 48.7
SalBow6G3038 Salvia bowleyana HOM05D005110 ORTHO05D006074 2.4e-17 92.4 120 46.7
Hund18768 Selenicereus undatus HOM05D005110 ORTHO05D006074 2.4e-17 92.4 118 44.1
MSTRG.18766 Avicennia marina HOM05D005110 ORTHO05D006074 3.1e-17 92.0 117 43.6
Oeu002365.1 Olea europaea HOM05D005110 ORTHO05D006074 3.1e-17 92.0 116 43.1
Rhsim13G0112900 Rhododendron simsii HOM05D005110 ORTHO05D006074 3.1e-17 92.0 121 46.3
AL4G21340 Arabidopsis lyrata HOM05D005110 ORTHO05D006074 4.1e-17 91.7 115 47.8
TWI31G0848 Tripterygium wilfordii HOM05D005110 ORTHO05D006074 5.3e-17 91.3 113 46.0
C04p24220 Brassica napus HOM05D005110 ORTHO05D006074 7.0e-17 90.9 115 47.8
BolC4t23920H Brassica oleracea HOM05D005110 ORTHO05D006074 7.0e-17 90.9 115 47.8
Psat5g259000 Pisum sativum HOM05D005110 ORTHO05D006074 7.0e-17 90.9 118 43.2
Thhalv10002110m.g Eutrema salsugineum HOM05D005110 ORTHO05D006074 9.1e-17 90.5 115 47.8
Solyc06g074260.4 Solanum lycopersicum HOM05D005110 ORTHO05D006074 9.1e-17 90.5 115 45.2
Sopen06g030680 Solanum pennellii HOM05D005110 ORTHO05D006074 1.6e-16 89.7 115 44.3
Lj2P968T16 Lonicera japonica HOM05D005110 ORTHO05D006074 2.0e-16 89.4 119 41.2
BcaC02g10869 Brassica carinata HOM05D005110 ORTHO05D006074 3.5e-16 88.6 115 47.0
DCAR_012208 Daucus carota HOM05D005110 ORTHO05D006074 3.5e-16 88.6 119 41.2
CSS0002660 Camellia sinensis var. sinensis HOM05D005110 ORTHO05D006074 4.5e-16 88.2 114 43.9
CARHR119990 Cardamine hirsuta HOM05D005110 ORTHO05D006074 7.7e-16 87.4 115 46.1
THA.LOC104800521 Tarenaya hassleriana HOM05D005110 ORTHO05D006074 1.0e-15 87.0 115 47.0
Sp4g10180 Schrenkiella parvula HOM05D005110 ORTHO05D006074 1.3e-15 86.7 115 47.8
MELO3C014504.2 Cucumis melo HOM05D005110 ORTHO05D006074 1.7e-15 86.3 127 44.1
Hund20930 Selenicereus undatus HOM05D005110 ORTHO05D006074 1.7e-15 86.3 118 44.1
CsaV3_6G038400 Cucumis sativus L. HOM05D005110 ORTHO05D006074 2.2e-15 85.9 127 44.1
ClCG02G022270 Citrullus lanatus HOM05D005110 ORTHO05D006074 2.9e-15 85.5 125 43.2
CsaV3_1G014930 Cucumis sativus L. HOM05D005110 ORTHO05D006074 2.9e-15 85.5 116 40.5
CsaV3_1G015850 Cucumis sativus L. HOM05D005110 ORTHO05D006074 2.9e-15 85.5 116 40.5
SGA_v2.0_scaffold22G09852 Striga asiatica HOM05D005110 ORTHO05D006074 2.9e-15 85.5 116 43.1
Carub.0004s0802 Capsella rubella HOM05D005110 ORTHO05D006074 5.0e-15 84.7 115 46.1
Sed0010097 Sechium edule HOM05D005110 ORTHO05D006074 5.0e-15 84.7 127 44.1
AT2G27385 Arabidopsis thaliana HOM05D005110 ORTHO05D006074 8.5e-15 84.0 115 46.1
Nitab4.5_0000937g0070 Nicotiana tabacum HOM05D005110 ORTHO05D006074 8.5e-15 84.0 117 39.3
Nitab4.5_0005472g0010 Nicotiana tabacum HOM05D005110 ORTHO05D006074 8.5e-15 84.0 117 40.2
ClCG01G012070 Citrullus lanatus HOM05D005110 ORTHO05D006074 1.1e-14 83.6 119 40.3
Peaxi162Scf00091g00622 Petunia axillaris HOM05D005110 ORTHO05D006074 1.1e-14 83.6 120 41.7
arahy.Tifrunner.gnm1.ann1.GADS7N Arachis hypogaea HOM05D005110 ORTHO05D006074 2.7e-13 79.0 117 42.7
MELO3C004693.2 Cucumis melo HOM05D005110 ORTHO05D006074 2.7e-13 79.0 94 44.7
arahy.Tifrunner.gnm1.ann1.NUG06Z Arachis hypogaea HOM05D005110 ORTHO05D006074 6.1e-13 77.8 119 41.2
Sc06g0008710 Simmondsia chinensis HOM05D005110 ORTHO05D006074 4.0e-12 75.1 119 39.5
Aa31LG1G13130 Aethionema arabicum HOM05D005110 ORTHO05D006074 8.8e-12 73.9 116 39.7
Migut.D02434 Erythranthe guttata HOM05D005110 ORTHO05D006074 8.8e-12 73.9 118 39.0
BcaB05g22726 Brassica carinata HOM05D005110 ORTHO05D006074 2.6e-11 72.4 117 37.6
BNapus_Darmor_BZH_scaffold_38p00660 Brassica napus HOM05D005110 ORTHO05D006074 5.7e-11 71.2 118 38.1
BraA02t05659Z Brassica rapa HOM05D005110 ORTHO05D006074 9.8e-11 70.5 117 37.6
Thhalv10014830m.g Eutrema salsugineum HOM05D005110 ORTHO05D006074 1.3e-10 70.1 118 36.4
C02p10870 Brassica napus HOM05D005110 ORTHO05D006074 2.2e-10 69.3 117 37.6
AL6G33450 Arabidopsis lyrata HOM05D005110 ORTHO05D006074 4.8e-10 68.2 119 36.1
AT5G22430 Arabidopsis thaliana HOM05D005110 ORTHO05D006074 4.8e-10 68.2 119 36.1
BolC2t07157H Brassica oleracea HOM05D005110 ORTHO05D006074 8.3e-10 67.4 117 35.9
Sp6g22820 Schrenkiella parvula HOM05D005110 ORTHO05D006074 1.1e-09 67.0 117 34.2
TAR623G0362 Trochodendron aralioides HOM05D005110 ORTHO05D006074 1.8e-09 66.2 68 51.5
BcaB08g36432 Brassica carinata HOM05D000477 ORTHO05D006074 2.0e-08 62.8 117 35.0
Carub.0006s2017 Capsella rubella HOM05D005110 ORTHO05D006074 2.7e-08 62.4 119 34.5
HPP92_005471 Vanilla planifolia HOM05D005110 ORTHO05D006074 5.9e-08 61.2 144 35.4
CARHR191100 Cardamine hirsuta HOM05D005110 ORTHO05D006074 1.0e-07 60.5 116 36.2
THA.LOC104810920 Tarenaya hassleriana HOM05D005110 ORTHO05D006074 3.8e-07 58.5 116 36.2
ATR0580G107 Amborella trichopoda HOM05D005110 ORTHO05D006074 1.9e-06 56.2 131 36.6


User provided reference genes

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