Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_011843 Vanilla planifolia HOM05D006406 ORTHO05D007883 2.8e-152 542.0 285 100.0
TAR633G0157 Trochodendron aralioides HOM05D006406 ORTHO05D007883 2.0e-65 253.4 312 45.8
MBI18_g46420_MAGBIO Magnolia biondii HOM05D006406 ORTHO05D007883 3.8e-64 249.2 305 47.2
Aqoxy5G00730 Aquilegia oxysepala HOM05D006406 ORTHO05D007883 1.4e-63 247.3 299 45.5
Hma1.2p1_1212F.1_g267260 Hydrangea macrophylla HOM05D006406 ORTHO05D007883 2.1e-62 243.4 303 46.5
MD04G1200800 Malus domestica HOM05D006406 ORTHO05D007883 3.5e-62 242.7 303 45.9
GSVIVG01031144001 Vitis vinifera HOM05D006406 ORTHO05D007883 4.6e-62 242.3 304 45.1
CAN.G1459.10 Capsicum annuum HOM05D006406 ORTHO05D007883 1.8e-61 240.4 295 45.1
Sabra13G0020100 Salix brachista HOM05D006406 ORTHO05D007883 1.8e-61 240.4 324 43.5
Sabra13G0015900 Salix brachista HOM05D006406 ORTHO05D007883 2.3e-61 240.0 319 44.2
Nitab4.5_0003844g0020 Nicotiana tabacum HOM05D006406 ORTHO05D007883 5.1e-61 238.8 292 45.9
COL.COLO4_10518 Corchorus olitorius HOM05D006406 ORTHO05D007883 6.7e-61 238.4 299 45.2
Nitab4.5_0003658g0090 Nicotiana tabacum HOM05D006406 ORTHO05D007883 6.7e-61 238.4 305 43.9
Rhsim07G0188300 Rhododendron simsii HOM05D006406 ORTHO05D007883 8.7e-61 238.0 298 44.3
vmacro04816 Vaccinium macrocarpon HOM05D006406 ORTHO05D007883 1.1e-60 237.7 317 44.2
CsaV3_1G038840 Cucumis sativus L. HOM05D006406 ORTHO05D007883 1.5e-60 237.3 301 42.9
CDE11G0411 Ceratophyllum demersum HOM05D001335 ORTHO05D001184 4.3e-60 235.7 303 44.2
Nn4g25830 Nelumbo nucifera HOM05D006406 ORTHO05D007883 7.4e-60 235.0 336 42.6
Oeu043348.1 Olea europaea HOM05D006406 ORTHO05D007883 7.4e-60 235.0 297 45.5
Hund07096 Selenicereus undatus HOM05D006406 ORTHO05D007883 7.4e-60 235.0 312 44.2
Sopen01g043220 Solanum pennellii HOM05D006406 ORTHO05D007883 1.3e-59 234.2 295 44.1
Peaxi162Scf00037g01125 Petunia axillaris HOM05D006406 ORTHO05D007883 1.6e-59 233.8 287 44.9
Potri.013G017100 Populus trichocarpa HOM05D006406 ORTHO05D007883 2.1e-59 233.4 321 43.3
Phvul.006G089700 Phaseolus vulgaris HOM05D006406 ORTHO05D007883 2.8e-59 233.0 310 43.5
ClCG03G017120 Citrullus lanatus HOM05D006406 ORTHO05D007883 3.7e-59 232.6 303 43.2
Manes.08G117600 Manihot esculenta HOM05D006406 ORTHO05D007883 3.7e-59 232.6 304 42.1
Solyc01g099700.3 Solanum lycopersicum HOM05D006406 ORTHO05D007883 6.2e-59 231.9 295 44.1
Duzib177G0190 Durio zibethinus HOM05D006406 ORTHO05D007883 8.1e-59 231.5 300 44.7
VMungo0540G0116 Vigna mungo HOM05D006406 ORTHO05D007883 1.1e-58 231.1 313 43.5
PSO210G1514 Papaver somniferum HOM05D006406 ORTHO05D007883 1.8e-58 230.3 302 43.7
Carub.0006s2486 Capsella rubella HOM05D006406 ORTHO05D007883 2.4e-58 229.9 311 42.8
Sed0006495 Sechium edule HOM05D006406 ORTHO05D007883 2.4e-58 229.9 307 42.7
Thecc.05G312900 Theobroma cacao HOM05D006406 ORTHO05D007883 2.4e-58 229.9 297 43.8
PGSC0003DMG400007542 Solanum tuberosum HOM05D006406 ORTHO05D007883 3.1e-58 229.6 298 43.3
PSO210G1688 Papaver somniferum HOM05D006406 ORTHO05D007883 4.0e-58 229.2 302 43.4
Lj9C146T2 Lonicera japonica HOM05D006406 ORTHO05D007883 5.3e-58 228.8 323 43.3
Haze_04140 Corylus avellana HOM05D006406 ORTHO05D007883 6.9e-58 228.4 318 43.7
Migut.N01744 Erythranthe guttata HOM05D006406 ORTHO05D007883 6.9e-58 228.4 305 44.6
Gorai.013G125700 Gossypium raimondii HOM05D006406 ORTHO05D007883 6.9e-58 228.4 299 43.5
TPR.G33225 Trifolium pratense HOM05D006406 ORTHO05D007883 6.9e-58 228.4 325 43.4
Gohir.D13G112000 Gossypium hirsutum HOM05D006406 ORTHO05D007883 1.2e-57 227.6 299 43.5
Actinidia35561 Actinidia chinensis HOM05D006406 ORTHO05D007883 1.5e-57 227.3 316 42.1
RcHm_v2.0_Chr3g0455711 Rosa chinensis HOM05D006406 ORTHO05D007883 1.5e-57 227.3 306 43.5
Sc16g0008820 Simmondsia chinensis HOM05D006406 ORTHO05D007883 1.5e-57 227.3 318 43.7
Cfa006628 Carpinus fangiana HOM05D006406 ORTHO05D007883 2.0e-57 226.9 318 43.7
Gohir.A13G109200 Gossypium hirsutum HOM05D006406 ORTHO05D007883 2.0e-57 226.9 299 43.5
Medtr7g112650 Medicago truncatula HOM05D006406 ORTHO05D007883 5.8e-57 225.3 321 41.7
Glyma.03G235700 Glycine max HOM05D006406 ORTHO05D007883 1.3e-56 224.2 310 42.3
SGA_v2.0_scaffold172G38986 Striga asiatica HOM05D006406 ORTHO05D007883 1.3e-56 224.2 307 44.0
Psat0s27g0120 Pisum sativum HOM05D006406 ORTHO05D007883 2.9e-56 223.0 296 43.2
Sp2g20880 Schrenkiella parvula HOM05D006406 ORTHO05D007883 2.9e-56 223.0 307 43.0
Hund07097 Selenicereus undatus HOM05D006406 ORTHO05D007883 4.9e-56 222.2 284 41.9
TWI12G0288 Tripterygium wilfordii HOM05D006406 ORTHO05D007883 6.4e-56 221.9 302 42.7
arahy.Tifrunner.gnm1.ann1.PP7FUY Arachis hypogaea HOM05D006406 ORTHO05D007883 8.4e-56 221.5 300 41.3
Atru.chr2.29 Acer truncatum HOM05D006406 ORTHO05D007883 1.1e-55 221.1 307 42.3
arahy.Tifrunner.gnm1.ann1.Q6XDLT Arachis hypogaea HOM05D006406 ORTHO05D007883 1.1e-55 221.1 300 41.3
Ca_05800_v3 Cicer arietinum L. HOM05D006406 ORTHO05D007883 1.1e-55 221.1 304 42.4
QL03p021882 Quercus lobata HOM05D006406 ORTHO05D007883 1.1e-55 221.1 313 41.2
AL6G39250 Arabidopsis lyrata HOM05D006406 ORTHO05D007883 1.4e-55 220.7 310 41.3
SalBow7G2778 Salvia bowleyana HOM05D006406 ORTHO05D007883 1.9e-55 220.3 289 43.3
DCAR_029393 Daucus carota HOM05D006406 ORTHO05D007883 2.5e-55 219.9 306 42.5
AT5G27710 Arabidopsis thaliana HOM05D006406 ORTHO05D007883 3.2e-55 219.5 314 41.4
CiPaw.08G161900 Carya illinoinensis HOM05D006406 ORTHO05D007883 3.2e-55 219.5 322 41.6
Cpa.g.sc48.95 Carica papaya HOM05D006406 ORTHO05D007883 4.2e-55 219.2 300 42.0
QL03p020986 Quercus lobata HOM05D006406 ORTHO05D007883 4.2e-55 219.2 313 40.9
Lalb_Chr18g0045761 Lupinus albus HOM05D006406 ORTHO05D007883 5.5e-55 218.8 299 41.8
Aa31LG11G9460 Aethionema arabicum HOM05D006406 ORTHO05D007883 9.3e-55 218.0 311 41.8
unitig_52.g17112 Utricularia gibba HOM05D006406 ORTHO05D007883 2.1e-54 216.9 318 41.8
ATR0796G153 Amborella trichopoda HOM05D006406 ORTHO05D007883 4.6e-54 215.7 229 49.3
Eucgr.B01914 Eucalyptus grandis HOM05D006406 ORTHO05D007883 6.0e-54 215.3 338 41.1
THA.LOC104818716 Tarenaya hassleriana HOM05D006406 ORTHO05D007883 6.0e-54 215.3 311 42.4
EL10Ac4g09916 Beta vulgaris HOM05D006406 ORTHO05D007883 1.3e-53 214.2 301 40.5
PGR083G2713 Punica granatum HOM05D006406 ORTHO05D007883 1.8e-53 213.8 291 42.3
TWI36G0652 Tripterygium wilfordii HOM05D006406 ORTHO05D007883 2.3e-53 213.4 296 40.9
CANSAT54G1062 Cannabis sativa HOM05D006406 ORTHO05D007883 3.0e-53 213.0 304 40.8
Ciclev10001711m.g Citrus clementina HOM05D006406 ORTHO05D007883 3.0e-53 213.0 324 40.7
Lsat_1_v5_gn_9_88181 Lactuca sativa HOM05D006406 ORTHO05D007883 8.7e-53 211.5 312 39.7
AUR62005205 Chenopodium quinoa HOM05D006406 ORTHO05D007883 1.1e-52 211.1 320 40.0
CSS0003718 Camellia sinensis var. sinensis HOM05D006406 ORTHO05D007883 1.9e-52 210.3 292 41.8
Os07g0673000 Oryza sativa ssp. japonica HOM05D006406 ORTHO05D007883 7.4e-52 208.4 264 44.7
Lj1g0022852 Lotus japonicus HOM05D006406 ORTHO05D007883 2.1e-51 206.8 314 41.1
BcaB04g19684 Brassica carinata HOM05D006406 ORTHO05D007883 2.8e-51 206.5 312 41.7
Dinv30810 Davidia involucrata HOM05D006406 ORTHO05D007883 1.4e-50 204.1 196 53.1
Thhalv10005730m.g Eutrema salsugineum HOM05D006406 ORTHO05D007883 1.4e-50 204.1 310 40.3
SEGI_05797 Sequoiadendron giganteum HOM05D006406 ORTHO05D007883 3.1e-50 203.0 297 41.1
Prupe.6G320900 Prunus persica HOM05D006406 ORTHO05D007883 4.0e-50 202.6 275 43.3
A09p05410 Brassica napus HOM05D006406 ORTHO05D007883 5.3e-50 202.2 309 41.7
BraA09t36179Z Brassica rapa HOM05D006406 ORTHO05D007883 5.3e-50 202.2 309 41.7
Hma1.2p1_1212F.1_g267270 Hydrangea macrophylla HOM05D006406 ORTHO05D007883 1.2e-49 201.1 189 56.1
PGSC0003DMG400024710 Solanum tuberosum HOM05D006406 ORTHO05D007883 3.4e-49 199.5 201 53.7
FAN14G3705 Fragaria x ananassa HOM05D006406 ORTHO05D007883 7.6e-49 198.4 300 40.0
Zm00001eb111280 Zea mays HOM05D006406 ORTHO05D007883 7.6e-49 198.4 214 53.3
CARHR186230 Cardamine hirsuta HOM05D006406 ORTHO05D007883 1.4e-47 194.1 284 41.2
C09p05890 Brassica napus HOM05D006406 ORTHO05D007883 1.9e-47 193.7 310 40.6
BolC9t53515H Brassica oleracea HOM05D006406 ORTHO05D007883 1.9e-47 193.7 310 40.6
BcaC04g23642 Brassica carinata HOM05D006406 ORTHO05D007883 2.5e-47 193.4 309 40.1
FAN05G5419 Fragaria x ananassa HOM05D006406 ORTHO05D007883 2.5e-47 193.4 270 40.7
Cc02_g34120 Coffea canephora HOM05D006406 ORTHO05D007883 9.3e-47 191.4 215 48.4
AUR62000764 Chenopodium quinoa HOM05D006406 ORTHO05D007883 1.2e-46 191.0 303 37.6
HanXRQChr11g0339311 Helianthus annuus HOM05D006406 ORTHO05D007883 1.3e-45 187.6 278 38.8
FvH4_6g06560 Fragaria vesca HOM05D006406 ORTHO05D007883 2.3e-45 186.8 207 47.3
ECA236G2290 Erigeron canadensis HOM05D006406 ORTHO05D007883 5.1e-45 185.7 282 38.3
Oeu043349.1 Olea europaea HOM05D006406 ORTHO05D007883 8.7e-45 184.9 183 51.9
MELO3C015308.2 Cucumis melo HOM05D006406 ORTHO05D007883 1.3e-43 181.0 284 37.3
Glyma.19G233500 Glycine max HOM05D006406 ORTHO05D007883 1.3e-43 181.0 220 45.9
Ah.06g189770 Amaranthus hybridus HOM05D006406 ORTHO05D007883 2.8e-43 179.9 260 41.2
SMO172G0153 Selaginella moellendorffii HOM05D006406 ORTHO05D007883 1.8e-37 160.6 287 35.5
SMO172G0232 Selaginella moellendorffii HOM05D006406 ORTHO05D007883 6.9e-34 148.7 288 34.0
arahy.Tifrunner.gnm1.ann1.AST3BR Arachis hypogaea HOM05D006406 ORTHO05D007883 3.8e-32 142.9 147 46.9
Pp3c6_26830 Physcomitrium patens HOM05D006406 ORTHO05D007883 4.2e-31 139.4 248 31.9
Mapoly0054s0047 Marchantia polymorpha HOM05D006406 ORTHO05D007883 2.1e-30 137.1 300 29.7
CBR_g19246 Chara braunii HOM05D006406 ORTHO05D007883 1.2e-25 121.3 229 31.4
MSTRG.16393 Avicennia marina HOM05D006406 ORTHO05D007883 1.4e-23 114.4 152 44.1
PSO421G0497 Papaver somniferum HOM05D006406 ORTHO05D007883 1.4e-21 107.8 302 30.8
SMO198G0100 Selaginella moellendorffii HOM05D006406 ORTHO05D007883 1.4e-21 107.8 175 37.7
FAN02G3513 Fragaria x ananassa HOM05D006406 ORTHO05D007883 4.5e-17 92.8 114 43.9
BcaB07g32734 Brassica carinata HOM05D006406 ORTHO05D007883 6.3e-11 72.4 113 40.7
AL3G41450 Arabidopsis lyrata HOM05D000059 ORTHO05D000128 5.3e-10 69.3 47 68.1
Lsat_1_v5_gn_5_186620 Lactuca sativa HOM05D006406 ORTHO05D007883 2.9e-08 63.5 167 30.5
AagrBONN_evm.TU.Sc2ySwM_362.2555 Anthoceros agrestis HOM05D006406 ORTHO05D007883 6.5e-08 62.4 46 60.9
Aqoxy601s001 Aquilegia oxysepala HOM05D006406 ORTHO05D007883 8.0e-06 55.5 34 73.5


User provided reference genes

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