Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_011796 Vanilla planifolia HOM05D007464 ORTHO05D009388 3.8e-245 851.3 499 100.0
HPP92_013668 Vanilla planifolia HOM05D007464 ORTHO05D009388 1.5e-129 467.2 499 59.5
HPP92_013650 Vanilla planifolia HOM05D007464 ORTHO05D009388 2.0e-113 413.7 465 57.4
HPP92_006947 Vanilla planifolia HOM05D007464 ORTHO05D009388 7.2e-111 405.2 498 54.2
arahy.Tifrunner.gnm1.ann1.9V8R16 Arachis hypogaea HOM05D007464 ORTHO05D009388 1.0e-48 198.7 467 37.7
Actinidia00714 Actinidia chinensis HOM05D007464 ORTHO05D009388 1.1e-47 195.3 402 42.0
Duzib138G0973 Durio zibethinus HOM05D007464 ORTHO05D009388 3.6e-46 190.3 405 37.5
Cc01_g20010 Coffea canephora HOM05D007464 ORTHO05D009388 9.0e-45 185.7 408 41.7
Duzib211G0172 Durio zibethinus HOM05D007464 ORTHO05D009388 3.4e-44 183.7 402 37.1
PGR119G1331 Punica granatum HOM05D007464 ORTHO05D009388 2.9e-43 180.6 391 38.4
Nitab4.5_0008256g0020 Nicotiana tabacum HOM05D007464 ORTHO05D009388 4.9e-43 179.9 399 40.1
Potri.002G213200 Populus trichocarpa HOM05D007464 ORTHO05D009388 6.4e-43 179.5 395 35.9
Solyc09g074280.1 Solanum lycopersicum HOM05D007464 ORTHO05D009388 1.4e-42 178.3 392 40.6
Sabra14G0102300 Salix brachista HOM05D007464 ORTHO05D009388 3.2e-42 177.2 394 38.6
Nn4g26088 Nelumbo nucifera HOM05D007464 ORTHO05D009388 4.2e-42 176.8 413 40.4
Lalb_Chr06g0163271 Lupinus albus HOM05D007464 ORTHO05D009388 1.2e-41 175.3 412 38.8
Thecc.01G287900 Theobroma cacao HOM05D007464 ORTHO05D009388 1.6e-41 174.9 393 33.6
Lsat_1_v5_gn_5_189900 Lactuca sativa HOM05D007464 ORTHO05D009388 6.0e-41 172.9 393 39.7
Dinv32981 Davidia involucrata HOM05D007464 ORTHO05D009388 7.9e-41 172.6 394 35.3
Sopen09g029110 Solanum pennellii HOM05D007464 ORTHO05D009388 1.3e-40 171.8 392 40.1
TAR362G0634 Trochodendron aralioides HOM05D007464 ORTHO05D009388 1.3e-40 171.8 394 38.8
Manes.05G070400 Manihot esculenta HOM05D007464 ORTHO05D009388 3.0e-40 170.6 392 38.5
MD11G1296100 Malus domestica HOM05D007464 ORTHO05D009388 3.9e-40 170.2 405 38.5
Duzib133G1000 Durio zibethinus HOM05D007464 ORTHO05D009388 1.5e-39 168.3 394 36.5
ECA248G1268 Erigeron canadensis HOM05D007464 ORTHO05D009388 5.6e-39 166.4 394 39.1
Glyma.02G151200 Glycine max HOM05D007464 ORTHO05D009388 7.4e-39 166.0 411 39.7
arahy.Tifrunner.gnm1.ann1.KRYP2Z Arachis hypogaea HOM05D007464 ORTHO05D009388 9.6e-39 165.6 410 34.9
arahy.Tifrunner.gnm1.ann1.TWB4J4 Arachis hypogaea HOM05D007464 ORTHO05D009388 9.6e-39 165.6 410 39.8
DCAR_018375 Daucus carota HOM05D007464 ORTHO05D009388 1.6e-38 164.9 392 39.3
DCAR_018376 Daucus carota HOM05D007464 ORTHO05D009388 1.6e-38 164.9 392 39.3
Cpa.g.sc9.143 Carica papaya HOM05D007464 ORTHO05D009388 6.2e-38 162.9 408 32.6
COL.COLO4_08053 Corchorus olitorius HOM05D007464 ORTHO05D009388 6.2e-38 162.9 394 37.1
DCAR_012440 Daucus carota HOM05D007464 ORTHO05D009388 8.1e-38 162.5 392 39.5
Hma1.2p1_1651F.1_g295790 Hydrangea macrophylla HOM05D007464 ORTHO05D009388 1.1e-37 162.2 395 38.7
arahy.Tifrunner.gnm1.ann1.6Q5HDN Arachis hypogaea HOM05D007464 ORTHO05D009388 1.4e-37 161.8 364 38.5
TWI59G0843 Tripterygium wilfordii HOM05D007464 ORTHO05D009388 2.4e-37 161.0 394 35.8
Gohir.A08G184300 Gossypium hirsutum HOM05D007464 ORTHO05D009388 3.1e-37 160.6 392 37.0
Medtr1g089180 Medicago truncatula HOM05D007464 ORTHO05D009388 5.3e-37 159.8 408 36.3
Nitab4.5_0008984g0010 Nicotiana tabacum HOM05D007464 ORTHO05D009388 5.3e-37 159.8 399 38.8
Psat6g168480 Pisum sativum HOM05D007464 ORTHO05D009388 5.3e-37 159.8 406 36.5
CiPaw.07G097200 Carya illinoinensis HOM05D007464 ORTHO05D009388 3.4e-36 157.1 395 36.7
Gorai.004G214200 Gossypium raimondii HOM05D007464 ORTHO05D009388 3.4e-36 157.1 392 36.5
Gohir.D08G202800 Gossypium hirsutum HOM05D007464 ORTHO05D009388 5.8e-36 156.4 392 36.5
MD03G1273500 Malus domestica HOM05D007464 ORTHO05D009388 5.8e-36 156.4 395 38.5
MBI19_g27178_MAGBIO Magnolia biondii HOM05D007464 ORTHO05D009388 9.9e-36 155.6 393 38.9
ECA247G3730 Erigeron canadensis HOM05D007464 ORTHO05D009388 1.3e-35 155.2 400 37.5
Prupe.8G249900 Prunus persica HOM05D007464 ORTHO05D009388 1.3e-35 155.2 395 38.2
Nitab4.5_0001985g0030 Nicotiana tabacum HOM05D007464 ORTHO05D009388 8.4e-35 152.5 468 36.3
Solyc09g074290.1 Solanum lycopersicum HOM05D007464 ORTHO05D009388 8.4e-35 152.5 392 38.3
Atru.chr5.1306 Acer truncatum HOM05D007464 ORTHO05D009388 7.1e-34 149.4 291 36.8
FAN20G1108 Fragaria x ananassa HOM05D007464 ORTHO05D009388 7.1e-34 149.4 406 36.7
FvH4_2g24420 Fragaria vesca HOM05D007464 ORTHO05D009388 1.2e-33 148.7 406 36.7
FAN24G2954 Fragaria x ananassa HOM05D007464 ORTHO05D009388 1.2e-33 148.7 406 36.7
Sopen09g029120 Solanum pennellii HOM05D007464 ORTHO05D009388 1.2e-33 148.7 392 38.0
DCAR_002779 Daucus carota HOM05D007464 ORTHO05D009388 2.1e-33 147.9 394 36.8
RcHm_v2.0_Chr6g0292251 Rosa chinensis HOM05D007464 ORTHO05D009388 2.1e-33 147.9 410 34.4
HanXRQChr01g0002881 Helianthus annuus HOM05D007464 ORTHO05D009388 4.6e-33 146.7 394 36.8
CAN.G1466.5 Capsicum annuum HOM05D007464 ORTHO05D009388 6.0e-33 146.4 398 38.4
Ciclev10019999m.g Citrus clementina HOM05D007464 ORTHO05D009388 6.0e-33 146.4 396 40.9
Phvul.007G167500 Phaseolus vulgaris HOM05D007464 ORTHO05D009388 6.0e-33 146.4 400 38.8
PGSC0003DMG400034780 Solanum tuberosum HOM05D007464 ORTHO05D009388 6.0e-33 146.4 392 37.8
PGSC0003DMG401003815 Solanum tuberosum HOM05D007464 ORTHO05D009388 6.0e-33 146.4 392 37.5
PGSC0003DMG402003815 Solanum tuberosum HOM05D007464 ORTHO05D009388 6.0e-33 146.4 392 37.8
VMungo0720G1822 Vigna mungo HOM05D007464 ORTHO05D009388 6.0e-33 146.4 395 38.7
vmacro02528 Vaccinium macrocarpon HOM05D007464 ORTHO05D009388 7.9e-33 146.0 411 36.5
PSO210G5947 Papaver somniferum HOM05D007464 ORTHO05D009388 1.0e-32 145.6 389 37.8
Peaxi162Scf00006g00365 Petunia axillaris HOM05D007464 ORTHO05D009388 1.8e-32 144.8 397 37.5
Eucgr.H01612 Eucalyptus grandis HOM05D007464 ORTHO05D009388 6.7e-32 142.9 404 36.4
FAN27G3498 Fragaria x ananassa HOM05D007464 ORTHO05D009388 8.7e-32 142.5 410 35.9
PSO832G1506 Papaver somniferum HOM05D007464 ORTHO05D009388 1.1e-31 142.1 394 37.3
Ca_10384_v3 Cicer arietinum L. HOM05D007464 ORTHO05D009388 1.5e-31 141.7 409 34.5
FAN15G0926 Fragaria x ananassa HOM05D007464 ORTHO05D009388 1.5e-31 141.7 406 36.0
Cfa006067 Carpinus fangiana HOM05D007464 ORTHO05D009388 5.6e-31 139.8 288 34.7
Lsat_1_v5_gn_9_5000 Lactuca sativa HOM05D007464 ORTHO05D009388 9.6e-31 139.0 394 36.0
SalBow2G2643 Salvia bowleyana HOM05D007464 ORTHO05D009388 1.3e-30 138.7 401 35.7
Haze_04781 Corylus avellana HOM05D007464 ORTHO05D009388 1.8e-29 134.8 288 34.0
HanXRQChr10g0283061 Helianthus annuus HOM05D007464 ORTHO05D009388 4.0e-29 133.7 394 34.0
Lj5g0006511 Lotus japonicus HOM05D007464 ORTHO05D009388 6.9e-29 132.9 410 34.4
QL12p023217 Quercus lobata HOM05D007464 ORTHO05D009388 1.2e-28 132.1 288 34.7
CANSAT25G0135 Cannabis sativa HOM05D007464 ORTHO05D009388 1.9e-26 124.8 291 33.0
Hma1.2p1_0209F.1_g089270 Hydrangea macrophylla HOM05D007464 ORTHO05D009388 1.9e-26 124.8 397 34.0
CsaV3_7G028410 Cucumis sativus L. HOM05D007464 ORTHO05D009388 4.2e-26 123.6 264 37.1
Peaxi162Scf00006g00369 Petunia axillaris HOM05D007464 ORTHO05D009388 1.5e-23 115.2 363 37.7
Migut.D00243 Erythranthe guttata HOM05D007464 ORTHO05D009388 7.4e-23 112.8 398 34.2
Aqoxy5G00591 Aquilegia oxysepala HOM05D007464 ORTHO05D009388 9.6e-23 112.5 367 34.1
CDE05G3330 Ceratophyllum demersum HOM05D007464 ORTHO05D009388 2.1e-22 111.3 408 29.9
ClCG09G006650 Citrullus lanatus HOM05D007464 ORTHO05D009388 3.7e-22 110.5 392 31.1
MELO3C015881.2 Cucumis melo HOM05D007464 ORTHO05D009388 1.1e-21 109.0 264 35.2
TPR.G16955 Trifolium pratense HOM05D007464 ORTHO05D009388 1.8e-21 108.2 401 27.7
Lj1C41G0 Lonicera japonica HOM05D007464 ORTHO05D009388 1.2e-20 105.5 296 37.5
ATR0487G010 Amborella trichopoda HOM05D007464 ORTHO05D009388 2.0e-20 104.8 392 34.7
TAR633G2105 Trochodendron aralioides HOM05D007663 ORTHO05D009455 1.4e-18 98.6 456 30.7
Rhsim13G0020100 Rhododendron simsii HOM05D007464 ORTHO05D009388 9.7e-15 85.9 204 36.8
Nitab4.5_0001985g0010 Nicotiana tabacum HOM05D007464 ORTHO05D009388 5.9e-12 76.6 263 29.3
Glyma.06G198600 Glycine max HOM05D007464 ORTHO05D009388 1.3e-11 75.5 93 47.3
Os01g0829100 Oryza sativa ssp. japonica HOM05D007663 ORTHO05D009455 1.2e-09 68.9 456 25.4
CSS0001014 Camellia sinensis var. sinensis HOM05D007663 ORTHO05D009455 1.6e-09 68.6 434 30.9
CSS0017188 Camellia sinensis var. sinensis HOM05D007663 ORTHO05D009455 1.6e-09 68.6 434 30.9
CAN.G1466.4 Capsicum annuum HOM05D007464 ORTHO05D009388 3.6e-09 67.4 292 32.9
Cpa.g.sc65.132 Carica papaya HOM05D007663 ORTHO05D009455 3.6e-09 67.4 455 28.4
AagrBONN_evm.TU.Sc2ySwM_362.193 Anthoceros agrestis HOM05D006239 ORTHO05D008159 1.4e-08 65.5 221 29.9
Sabra13G0054800 Salix brachista HOM05D006239 ORTHO05D008159 1.4e-08 65.5 81 42.0
Glyma.16G038200 Glycine max HOM05D006239 ORTHO05D008159 1.8e-08 65.1 107 39.3
Gohir.D08G236400 Gossypium hirsutum HOM05D006239 ORTHO05D008159 3.9e-08 63.9 95 34.7
HPP92_017662 Vanilla planifolia HOM05D006239 ORTHO05D008159 6.7e-08 63.2 417 25.4
QL03p054522 Quercus lobata HOM05D002893 ORTHO05D003387 8.8e-08 62.8 158 30.4
Gorai.004G251600 Gossypium raimondii HOM05D006239 ORTHO05D008159 1.1e-07 62.4 95 33.7
Haze_12378 Corylus avellana HOM05D002893 ORTHO05D003387 2.0e-07 61.6 71 45.1
MBI15_g12399_MAGBIO Magnolia biondii HOM05D007663 ORTHO05D009455 2.0e-07 61.6 412 28.6
vmacro17693 Vaccinium macrocarpon HOM05D007663 ORTHO05D009455 2.6e-07 61.2 415 28.7
MSTRG.10334 Avicennia marina HOM05D005036 ORTHO05D005881 4.4e-07 60.5 107 37.4
HPP92_015661 Vanilla planifolia HOM05D006239 ORTHO05D008159 4.4e-07 60.5 426 26.3
GSVIVG01032765001 Vitis vinifera HOM05D007663 ORTHO05D009455 4.4e-07 60.5 412 24.3
QL04p014776 Quercus lobata HOM05D000413 ORTHO05D000292 5.7e-07 60.1 71 40.8
Rhsim03G0146000 Rhododendron simsii HOM05D007663 ORTHO05D009455 5.7e-07 60.1 426 27.9
HanXRQChr13g0398581 Helianthus annuus HOM05D006239 ORTHO05D008159 7.4e-07 59.7 67 47.8
Aqoxy5G03468 Aquilegia oxysepala HOM05D002893 ORTHO05D003387 9.7e-07 59.3 153 26.8
Ca_25688_v3 Cicer arietinum L. HOM05D006239 ORTHO05D008159 1.3e-06 58.9 63 47.6
Lalb_Chr02g0157291 Lupinus albus HOM05D006239 ORTHO05D008159 1.3e-06 58.9 71 46.5
Actinidia09670 Actinidia chinensis HOM05D002893 ORTHO05D003387 1.7e-06 58.5 124 31.5
Dinv24826 Davidia involucrata HOM05D019439 ORTHO05D035045 1.7e-06 58.5 54 51.9
Cfa009344 Carpinus fangiana HOM05D002893 ORTHO05D003387 2.2e-06 58.2 67 43.3
CBR_g16035 Chara braunii HOM05D003550 ORTHO05D004336 2.2e-06 58.2 178 31.5
AagrBONN_evm.TU.Sc2ySwM_117.3077 Anthoceros agrestis HOM05D000413 ORTHO05D000292 2.8e-06 57.8 88 42.0
DCAR_010462 Daucus carota HOM05D007663 ORTHO05D009455 2.8e-06 57.8 480 27.7
PSO210G4185 Papaver somniferum HOM05D000413 ORTHO05D000292 2.8e-06 57.8 89 39.3
AagrBONN_evm.TU.Sc2ySwM_117.3093 Anthoceros agrestis HOM05D000413 ORTHO05D000292 4.8e-06 57.0 88 42.0
Mapoly0035s0002 Marchantia polymorpha HOM05D011467 ORTHO05D014661 4.8e-06 57.0 129 34.1
Mapoly0035s0007 Marchantia polymorpha HOM05D011467 ORTHO05D014661 4.8e-06 57.0 129 34.1
Actinidia30889 Actinidia chinensis HOM05D002893 ORTHO05D003387 6.3e-06 56.6 69 42.0
Dinv24825 Davidia involucrata HOM05D019439 ORTHO05D035045 6.3e-06 56.6 60 46.7
Peaxi162Scf01128g00018 Petunia axillaris HOM05D005036 ORTHO05D005881 6.3e-06 56.6 86 39.5
Thecc.02G275700 Theobroma cacao HOM05D002893 ORTHO05D003387 6.3e-06 56.6 156 27.6
Nn2g10961 Nelumbo nucifera HOM05D007663 ORTHO05D009455 8.2e-06 56.2 405 29.4
PRCOL_00004545 Prasinoderma coloniale HOM05D047278 ORTHO05D333915 8.2e-06 56.2 271 27.7


User provided reference genes

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