Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_011765 Vanilla planifolia HOM05D004879 ORTHO05D008271 3.5e-135 485.0 242 100.0
Os02g0168000 Oryza sativa ssp. japonica HOM05D004879 ORTHO05D008271 6.6e-86 321.2 243 65.8
Nn7g37079 Nelumbo nucifera HOM05D004879 ORTHO05D008271 4.3e-85 318.5 252 62.7
Ciclev10002295m.g Citrus clementina HOM05D004879 ORTHO05D008271 2.1e-84 316.2 222 66.7
Peaxi162Scf00192g00042 Petunia axillaris HOM05D004879 ORTHO05D008271 8.1e-84 314.3 222 67.1
Dinv15026 Davidia involucrata HOM05D004879 ORTHO05D008271 1.1e-83 313.9 222 67.1
Gorai.013G107000 Gossypium raimondii HOM05D004879 ORTHO05D008271 1.8e-83 313.2 231 65.4
BraA07t29233Z Brassica rapa HOM05D004879 ORTHO05D008271 2.4e-83 312.8 231 66.2
AUR62000245 Chenopodium quinoa HOM05D004879 ORTHO05D008271 2.4e-83 312.8 228 66.7
Gohir.D03G062100 Gossypium hirsutum HOM05D004879 ORTHO05D008271 2.4e-83 312.8 231 65.4
PSO339G6668 Papaver somniferum HOM05D004879 ORTHO05D008271 3.1e-83 312.4 222 68.5
Potri.001G224400 Populus trichocarpa HOM05D004879 ORTHO05D008271 3.1e-83 312.4 230 64.3
A07p14910 Brassica napus HOM05D004879 ORTHO05D008271 4.0e-83 312.0 231 65.8
PSO384G4586 Papaver somniferum HOM05D004879 ORTHO05D008271 4.0e-83 312.0 222 68.0
BcaC06g34908 Brassica carinata HOM05D004879 ORTHO05D008271 5.3e-83 311.6 231 65.8
C07p21890 Brassica napus HOM05D004879 ORTHO05D008271 5.3e-83 311.6 231 65.8
C07p21910 Brassica napus HOM05D004879 ORTHO05D008271 5.3e-83 311.6 231 65.8
BolC7t42723H Brassica oleracea HOM05D004879 ORTHO05D008271 5.3e-83 311.6 231 65.8
Cpa.g.sc36.59 Carica papaya HOM05D004879 ORTHO05D008271 5.3e-83 311.6 232 66.4
Sabra16G0133100 Salix brachista HOM05D004879 ORTHO05D008271 6.9e-83 311.2 230 63.5
Nitab4.5_0000832g0030 Nicotiana tabacum HOM05D004879 ORTHO05D008271 9.0e-83 310.8 222 66.7
Sp1g19390 Schrenkiella parvula HOM05D004879 ORTHO05D008271 9.0e-83 310.8 226 64.6
AT1G21840 Arabidopsis thaliana HOM05D004879 ORTHO05D008271 3.4e-82 308.9 233 63.9
BcaB08g37376 Brassica carinata HOM05D004879 ORTHO05D008271 3.4e-82 308.9 245 62.0
BcaB08g37377 Brassica carinata HOM05D004879 ORTHO05D008271 3.4e-82 308.9 245 62.0
Zm00001eb232950 Zea mays HOM05D004879 ORTHO05D008271 4.4e-82 308.5 239 65.7
AL1G35040 Arabidopsis lyrata HOM05D004879 ORTHO05D008271 7.6e-82 307.8 233 63.1
EL10Ac4g10052 Beta vulgaris HOM05D004879 ORTHO05D008271 7.6e-82 307.8 231 63.2
CiPaw.13G145200 Carya illinoinensis HOM05D004879 ORTHO05D008271 9.9e-82 307.4 222 65.3
Haze_14485 Corylus avellana HOM05D004879 ORTHO05D008271 1.3e-81 307.0 222 65.8
Gohir.A02G109100 Gossypium hirsutum HOM05D004879 ORTHO05D008271 1.3e-81 307.0 231 64.5
Rhsim13G0203600 Rhododendron simsii HOM05D004879 ORTHO05D008271 1.3e-81 307.0 222 65.3
Nitab4.5_0005379g0030 Nicotiana tabacum HOM05D004879 ORTHO05D008271 1.7e-81 306.6 222 65.8
Solyc03g031430.1 Solanum lycopersicum HOM05D004879 ORTHO05D008271 1.7e-81 306.6 222 65.8
Lj1P989T20 Lonicera japonica HOM05D004879 ORTHO05D008271 2.9e-81 305.8 222 65.8
SGA_v2.0_scaffold2G01091 Striga asiatica HOM05D004879 ORTHO05D008271 2.9e-81 305.8 239 63.6
Manes.01G175400 Manihot esculenta HOM05D004879 ORTHO05D008271 3.8e-81 305.4 222 63.5
QL01p020549 Quercus lobata HOM05D004879 ORTHO05D008271 3.8e-81 305.4 221 65.2
Cfa007603 Carpinus fangiana HOM05D004879 ORTHO05D008271 4.9e-81 305.1 222 65.8
Thhalv10009605m.g Eutrema salsugineum HOM05D004879 ORTHO05D008271 4.9e-81 305.1 230 62.6
DCAR_018145 Daucus carota HOM05D004879 ORTHO05D008271 6.4e-81 304.7 222 64.4
MBI13_g10954_MAGBIO Magnolia biondii HOM05D004879 ORTHO05D008271 8.4e-81 304.3 222 67.6
Sed0013542 Sechium edule HOM05D004879 ORTHO05D008271 8.4e-81 304.3 222 64.9
Sopen03g005320 Solanum pennellii HOM05D004879 ORTHO05D008271 8.4e-81 304.3 222 65.3
CDE10G1192 Ceratophyllum demersum HOM05D004879 ORTHO05D008271 1.1e-80 303.9 242 61.6
Cc00_g20630 Coffea canephora HOM05D004879 ORTHO05D008271 1.4e-80 303.5 222 65.3
Migut.F00393 Erythranthe guttata HOM05D004879 ORTHO05D008271 1.4e-80 303.5 239 64.0
Carub.0001s2129 Capsella rubella HOM05D004879 ORTHO05D008271 1.9e-80 303.1 228 62.3
Lalb_Chr04g0249461 Lupinus albus HOM05D004879 ORTHO05D008271 1.9e-80 303.1 222 64.9
PGSC0003DMG400024255 Solanum tuberosum HOM05D004879 ORTHO05D008271 2.4e-80 302.8 222 64.9
Aqoxy1G01328 Aquilegia oxysepala HOM05D004879 ORTHO05D008271 3.2e-80 302.4 222 66.2
CAN.G1097.5 Capsicum annuum HOM05D004879 ORTHO05D008271 3.2e-80 302.4 222 64.4
Glyma.14G039400 Glycine max HOM05D004879 ORTHO05D008271 3.2e-80 302.4 222 66.2
Phvul.008G205100 Phaseolus vulgaris HOM05D004879 ORTHO05D008271 4.2e-80 302.0 229 64.2
Actinidia07011 Actinidia chinensis HOM05D004879 ORTHO05D008271 5.4e-80 301.6 222 65.8
Duzib041G0713 Durio zibethinus HOM05D004879 ORTHO05D008271 1.2e-79 300.4 222 65.3
Sc06g0004840 Simmondsia chinensis HOM05D004879 ORTHO05D008271 1.6e-79 300.1 239 59.0
Glyma.02G276400 Glycine max HOM05D004879 ORTHO05D008271 2.1e-79 299.7 222 65.3
RcHm_v2.0_Chr6g0250481 Rosa chinensis HOM05D004879 ORTHO05D008271 2.1e-79 299.7 230 63.0
TPR.G14628 Trifolium pratense HOM05D004879 ORTHO05D008271 2.7e-79 299.3 222 65.3
VMungo0647G0171 Vigna mungo HOM05D004879 ORTHO05D008271 2.7e-79 299.3 222 65.3
RcHm_v2.0_Chr6g0250811 Rosa chinensis HOM05D004879 ORTHO05D008271 6.0e-79 298.1 230 63.0
BcaC06g34909 Brassica carinata HOM05D004879 ORTHO05D008271 7.9e-79 297.7 231 64.1
FvH4_2g00490 Fragaria vesca HOM05D004879 ORTHO05D008271 7.9e-79 297.7 229 63.3
ClCG02G014970 Citrullus lanatus HOM05D004879 ORTHO05D008271 1.3e-78 297.0 222 64.9
PGR102G1558 Punica granatum HOM05D004879 ORTHO05D008271 3.9e-78 295.4 230 61.3
CsaV3_2G007030 Cucumis sativus L. HOM05D004879 ORTHO05D008271 5.1e-78 295.0 222 62.6
LjContig00564g0012926 Lotus japonicus HOM05D004879 ORTHO05D008271 6.6e-78 294.7 222 63.1
CARHR022120 Cardamine hirsuta HOM05D004879 ORTHO05D008271 1.1e-77 293.9 222 63.1
Ca_06172_v3 Cicer arietinum L. HOM05D004879 ORTHO05D008271 1.1e-77 293.9 222 64.0
MELO3C004190.2 Cucumis melo HOM05D004879 ORTHO05D008271 1.5e-77 293.5 222 62.2
Psat0s4349g0080 Pisum sativum HOM05D004879 ORTHO05D008271 1.5e-77 293.5 222 64.0
Medtr5g088570 Medicago truncatula HOM05D004879 ORTHO05D008271 1.9e-77 293.1 222 64.0
Psat0s2829g0160 Pisum sativum HOM05D004879 ORTHO05D008271 1.9e-77 293.1 222 64.0
Eucgr.B03769 Eucalyptus grandis HOM05D004879 ORTHO05D008271 3.3e-77 292.4 222 63.5
Aa31LG7G5930 Aethionema arabicum HOM05D004879 ORTHO05D008271 4.3e-77 292.0 228 60.5
TWI79G1014 Tripterygium wilfordii HOM05D004879 ORTHO05D008271 7.3e-77 291.2 222 62.6
TWI31G0278 Tripterygium wilfordii HOM05D004879 ORTHO05D008271 2.1e-76 289.7 222 63.1
ATR0782G197 Amborella trichopoda HOM05D004879 ORTHO05D008271 2.8e-76 289.3 233 58.4
HPP92_011772 Vanilla planifolia HOM05D004879 ORTHO05D008271 2.8e-76 289.3 158 93.0
unitig_37.g12512 Utricularia gibba HOM05D004879 ORTHO05D008271 8.1e-76 287.7 234 61.5
COL.COLO4_35490 Corchorus olitorius HOM05D004879 ORTHO05D008271 5.3e-75 285.0 224 62.5
FAN24G3181 Fragaria x ananassa HOM05D004879 ORTHO05D008271 1.5e-74 283.5 223 61.9
CANSAT54G0046 Cannabis sativa HOM05D004879 ORTHO05D008271 2.0e-74 283.1 234 60.7
CSS0042269 Camellia sinensis var. sinensis HOM05D004879 ORTHO05D008271 1.7e-73 280.0 222 61.3
ECA240G2819 Erigeron canadensis HOM05D004879 ORTHO05D008271 2.2e-73 279.6 216 61.6
MD10G1003100 Malus domestica HOM05D004879 ORTHO05D008271 1.4e-72 276.9 263 54.8
FAN27G1110 Fragaria x ananassa HOM05D004879 ORTHO05D008271 1.8e-70 270.0 217 61.3
Prupe.8G030900 Prunus persica HOM05D004879 ORTHO05D008271 3.0e-70 269.2 203 65.5
SMO137G0182 Selaginella moellendorffii HOM05D004879 ORTHO05D008271 4.3e-69 265.4 232 57.3
SalBow4G0907 Salvia bowleyana HOM05D004879 ORTHO05D008271 4.8e-68 261.9 196 63.8
SEGI_07822 Sequoiadendron giganteum HOM05D004879 ORTHO05D008271 1.8e-67 260.0 240 54.6
MSTRG.8775 Avicennia marina HOM05D004879 ORTHO05D008271 4.9e-65 251.9 230 56.5
Atru.chr3.2942 Acer truncatum HOM05D004879 ORTHO05D008271 6.5e-65 251.5 191 62.8
FAN06G1945 Fragaria x ananassa HOM05D004879 ORTHO05D008271 2.3e-62 243.0 195 61.0
MD12G1125200 Malus domestica HOM05D000005 ORTHO05D000012 1.1e-61 240.7 223 54.3
Mapoly0075s0047 Marchantia polymorpha HOM05D004879 ORTHO05D008271 1.8e-59 233.4 227 50.2
Hma1.2p1_1843F.1_g305050 Hydrangea macrophylla HOM05D004879 ORTHO05D008271 5.1e-54 215.3 176 63.1
Thecc.08G138700 Theobroma cacao HOM05D004879 ORTHO05D008271 1.5e-53 213.8 151 66.2
Pp3c21_1390 Physcomitrium patens HOM05D004879 ORTHO05D008271 2.2e-52 209.9 231 48.9
MD12G1125400 Malus domestica HOM05D004879 ORTHO05D008271 4.1e-51 205.7 187 55.1
arahy.Tifrunner.gnm1.ann1.V07RCD Arachis hypogaea HOM05D004879 ORTHO05D008271 1.4e-48 197.2 228 46.5
arahy.Tifrunner.gnm1.ann1.WGUK12 Arachis hypogaea HOM05D004879 ORTHO05D008271 1.6e-47 193.7 228 45.2
CBR_g70735 Chara braunii HOM05D004879 ORTHO05D008271 2.3e-46 189.9 261 41.0
RcHm_v2.0_Chr1g0323071 Rosa chinensis HOM05D004879 ORTHO05D008271 1.4e-43 180.6 139 61.9
Oeu030259.1 Olea europaea HOM05D004879 ORTHO05D008271 4.7e-39 165.6 229 42.4
RcHm_v2.0_Chr1g0322261 Rosa chinensis HOM05D004879 ORTHO05D008271 4.7e-39 165.6 128 61.7
arahy.Tifrunner.gnm1.ann1.4BAK6K Arachis hypogaea HOM05D004879 ORTHO05D009754 1.1e-35 154.5 256 38.3
GSVIVG01037361001 Vitis vinifera HOM05D004879 ORTHO05D008271 4.5e-34 149.1 229 40.2
SHI10553 Sapria himalayana HOM05D004879 ORTHO05D008271 8.5e-33 144.8 222 37.4
Actinidia37185 Actinidia chinensis HOM05D004879 ORTHO05D008271 1.9e-32 143.7 198 43.9
MCO04G443 Micromonas commoda HOM05D004879 ORTHO05D008271 1.9e-32 143.7 270 37.8
CBR_g27954 Chara braunii HOM05D004879 ORTHO05D008271 1.8e-30 137.1 170 44.1
RcHm_v2.0_Chr1g0322441 Rosa chinensis HOM05D004879 ORTHO05D008271 2.1e-23 113.6 79 63.3
FAN24G2371 Fragaria x ananassa HOM05D004879 ORTHO05D000038 9.8e-21 104.8 106 51.9
RcHm_v2.0_Chr1g0322591 Rosa chinensis HOM05D004879 ORTHO05D008271 1.6e-15 87.4 61 65.6
RcHm_v2.0_Chr1g0322271 Rosa chinensis HOM05D004879 ORTHO05D008271 8.3e-12 75.1 54 63.0
arahy.Tifrunner.gnm1.ann1.0GE5DD Arachis hypogaea HOM05D004879 ORTHO05D008271 1.1e-11 74.7 51 62.7
RcHm_v2.0_Chr1g0322581 Rosa chinensis HOM05D004879 ORTHO05D008271 9.2e-11 71.6 64 54.7
RcHm_v2.0_Chr1g0322541 Rosa chinensis HOM05D004879 ORTHO05D008271 5.0e-09 65.9 50 60.0
RcHm_v2.0_Chr1g0322461 Rosa chinensis HOM05D004879 ORTHO05D008271 2.5e-08 63.5 46 65.2
PRCOL_00002215 Prasinoderma coloniale HOM05D005590 ORTHO05D007084 1.0e-06 58.2 230 26.1
arahy.Tifrunner.gnm1.ann1.4Q1DLP Arachis hypogaea HOM05D004879 ORTHO05D008271 1.8e-06 57.4 47 48.9


User provided reference genes

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