Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_011691 Vanilla planifolia HOM05D005513 ORTHO05D006848 8.0e-205 716.8 356 100.0
HPP92_011686 Vanilla planifolia HOM05D005513 ORTHO05D006848 1.5e-203 712.6 356 99.4
Cpa.g.sc343.3 Carica papaya HOM05D005513 ORTHO05D006848 5.1e-127 458.4 321 70.7
Nn7g37504 Nelumbo nucifera HOM05D005513 ORTHO05D006848 1.3e-125 453.8 309 71.5
TWI38G0850 Tripterygium wilfordii HOM05D005513 ORTHO05D006848 2.1e-125 453.0 302 72.2
CSS0036954 Camellia sinensis var. sinensis HOM05D005513 ORTHO05D006848 2.8e-125 452.6 305 71.8
PGR042G2305 Punica granatum HOM05D005513 ORTHO05D006848 2.8e-125 452.6 300 73.3
Ciclev10021262m.g Citrus clementina HOM05D005513 ORTHO05D006848 3.7e-125 452.2 300 72.3
CANSAT56G3287 Cannabis sativa HOM05D005513 ORTHO05D006848 6.2e-125 451.4 300 73.7
CAN.G575.118 Capsicum annuum HOM05D005513 ORTHO05D006848 4.1e-124 448.7 353 66.0
Manes.05G132000 Manihot esculenta HOM05D005513 ORTHO05D006848 5.3e-124 448.4 309 69.6
TAR362G0948 Trochodendron aralioides HOM05D005513 ORTHO05D006848 5.3e-124 448.4 300 72.0
Atru.chr4.1482 Acer truncatum HOM05D005513 ORTHO05D006848 9.0e-124 447.6 300 71.3
vmacro15699 Vaccinium macrocarpon HOM05D005513 ORTHO05D006848 9.0e-124 447.6 311 71.1
GSVIVG01038190001 Vitis vinifera HOM05D005513 ORTHO05D006848 1.2e-123 447.2 300 72.0
Sabra19G0110200 Salix brachista HOM05D005513 ORTHO05D006848 1.5e-123 446.8 300 71.7
Thecc.04G162400 Theobroma cacao HOM05D005513 ORTHO05D006848 1.5e-123 446.8 300 72.7
Os08g0542600 Oryza sativa ssp. japonica HOM05D005513 ORTHO05D006848 2.6e-123 446.0 300 70.7
Phvul.003G059600 Phaseolus vulgaris HOM05D005513 ORTHO05D006848 2.6e-123 446.0 300 70.7
SalBow3G2273 Salvia bowleyana HOM05D005513 ORTHO05D006848 3.4e-123 445.7 307 69.7
Sed0010820 Sechium edule HOM05D005513 ORTHO05D006848 3.4e-123 445.7 311 69.1
ATR0743G005 Amborella trichopoda HOM05D005513 ORTHO05D006848 4.5e-123 445.3 300 71.3
CAN.G2177.12 Capsicum annuum HOM05D005513 ORTHO05D006848 4.5e-123 445.3 315 70.8
Nitab4.5_0008882g0020 Nicotiana tabacum HOM05D005513 ORTHO05D006848 5.8e-123 444.9 300 71.7
Lalb_Chr16g0384361 Lupinus albus HOM05D005513 ORTHO05D006848 7.6e-123 444.5 300 71.3
Gohir.A10G146000 Gossypium hirsutum HOM05D005513 ORTHO05D006848 1.0e-122 444.1 300 71.3
Gohir.D10G121000 Gossypium hirsutum HOM05D005513 ORTHO05D006848 1.0e-122 444.1 300 71.3
Gorai.011G132900 Gossypium raimondii HOM05D005513 ORTHO05D006848 1.0e-122 444.1 300 71.3
Potri.019G099100 Populus trichocarpa HOM05D005513 ORTHO05D006848 1.0e-122 444.1 300 71.3
CAN.G1579.15 Capsicum annuum HOM05D005513 ORTHO05D006848 1.3e-122 443.7 300 73.0
Actinidia11441 Actinidia chinensis HOM05D005513 ORTHO05D006848 1.7e-122 443.4 312 69.6
Ca_18624_v3 Cicer arietinum L. HOM05D005513 ORTHO05D006848 1.7e-122 443.4 300 70.3
Cc09_g04220 Coffea canephora HOM05D005513 ORTHO05D006848 1.7e-122 443.4 300 71.3
VMungo0251G3259 Vigna mungo HOM05D005513 ORTHO05D006848 1.7e-122 443.4 300 70.7
arahy.Tifrunner.gnm1.ann1.GWB5D5 Arachis hypogaea HOM05D005513 ORTHO05D006848 2.2e-122 443.0 300 71.3
Cfa015273 Carpinus fangiana HOM05D005513 ORTHO05D006848 2.9e-122 442.6 309 68.6
Duzib151G0764 Durio zibethinus HOM05D005513 ORTHO05D006848 2.9e-122 442.6 309 68.3
AUR62002417 Chenopodium quinoa HOM05D005513 ORTHO05D006848 5.0e-122 441.8 298 72.5
PSO675G7310 Papaver somniferum HOM05D005513 ORTHO05D006848 6.5e-122 441.4 306 70.9
Migut.F01838 Erythranthe guttata HOM05D005513 ORTHO05D006848 8.4e-122 441.0 309 69.3
Sopen12g019010 Solanum pennellii HOM05D005513 ORTHO05D006848 8.4e-122 441.0 301 72.1
MSTRG.8188 Avicennia marina HOM05D005513 ORTHO05D006848 1.4e-121 440.3 307 69.1
EL10Ac3g06111 Beta vulgaris HOM05D005513 ORTHO05D006848 1.4e-121 440.3 321 67.3
Prupe.7G267200 Prunus persica HOM05D005513 ORTHO05D006848 1.4e-121 440.3 300 71.7
arahy.Tifrunner.gnm1.ann1.GC3WT6 Arachis hypogaea HOM05D005513 ORTHO05D006848 1.9e-121 439.9 300 70.7
Medtr4g087590 Medicago truncatula HOM05D005513 ORTHO05D006848 1.9e-121 439.9 300 69.3
Nitab4.5_0001936g0090 Nicotiana tabacum HOM05D005513 ORTHO05D006848 3.2e-121 439.1 300 71.3
TPR.G23516 Trifolium pratense HOM05D005513 ORTHO05D006848 3.2e-121 439.1 300 69.7
Glyma.02G138700 Glycine max HOM05D005513 ORTHO05D006848 5.5e-121 438.3 300 69.7
Lj4g0013603 Lotus japonicus HOM05D005513 ORTHO05D006848 5.5e-121 438.3 300 70.0
CiPaw.01G170000 Carya illinoinensis HOM05D005513 ORTHO05D006848 7.2e-121 438.0 311 67.5
PGSC0003DMG400004444 Solanum tuberosum HOM05D005513 ORTHO05D006848 9.3e-121 437.6 301 71.8
Sed0015185 Sechium edule HOM05D005513 ORTHO05D006848 1.6e-120 436.8 300 69.7
CSS0028849 Camellia sinensis var. sinensis HOM05D005513 ORTHO05D006848 2.7e-120 436.0 282 74.8
QL10p057731 Quercus lobata HOM05D005513 ORTHO05D006848 2.7e-120 436.0 299 70.2
RcHm_v2.0_Chr2g0085091 Rosa chinensis HOM05D005513 ORTHO05D006848 2.7e-120 436.0 300 70.7
RhsimUnG0015400 Rhododendron simsii HOM05D005513 ORTHO05D006848 4.6e-120 435.3 334 66.5
Glyma.07G206300 Glycine max HOM05D005513 ORTHO05D006848 6.1e-120 434.9 299 69.6
Atru.chr4.1511 Acer truncatum HOM05D005587 ORTHO05D007287 7.9e-120 434.5 291 71.8
COL.COLO4_08197 Corchorus olitorius HOM05D005513 ORTHO05D006848 1.0e-119 434.1 310 69.0
PSO541G5416 Papaver somniferum HOM05D005513 ORTHO05D006848 1.0e-119 434.1 296 72.0
Peaxi162Scf00544g00118 Petunia axillaris HOM05D005513 ORTHO05D006848 1.0e-119 434.1 300 69.7
FvH4_1g00490 Fragaria vesca HOM05D005513 ORTHO05D006848 1.3e-119 433.7 300 69.7
Zm00001eb037350 Zea mays HOM05D005513 ORTHO05D006848 1.3e-119 433.7 298 70.5
FAN26G1480 Fragaria x ananassa HOM05D005513 ORTHO05D006848 2.3e-119 433.0 300 69.7
Psat7g119320 Pisum sativum HOM05D005513 ORTHO05D006848 2.3e-119 433.0 300 69.3
AUR62023772 Chenopodium quinoa HOM05D005513 ORTHO05D006848 5.1e-119 431.8 298 71.5
FAN23G0174 Fragaria x ananassa HOM05D005513 ORTHO05D006848 5.1e-119 431.8 300 69.7
Atru.BG.100.p Acer truncatum HOM05D005513 ORTHO05D006848 2.5e-118 429.5 283 72.4
Peaxi162Scf00544g00117 Petunia axillaris HOM05D005513 ORTHO05D006848 3.3e-118 429.1 317 66.6
CAN.G575.103 Capsicum annuum HOM05D005513 ORTHO05D006848 4.3e-118 428.7 299 71.2
Oeu057533.3 Olea europaea HOM05D005513 ORTHO05D006848 2.8e-117 426.0 337 62.6
Ca_18630_v3 Cicer arietinum L. HOM05D005513 ORTHO05D006848 4.8e-117 425.2 282 71.6
Eucgr.L00024 Eucalyptus grandis HOM05D005513 ORTHO05D006848 6.3e-117 424.9 297 70.0
QL10p057421 Quercus lobata HOM05D005513 ORTHO05D006848 6.3e-117 424.9 283 72.1
Rhsim02G0085900 Rhododendron simsii HOM05D005513 ORTHO05D006848 6.3e-117 424.9 373 61.4
HanXRQChr10g0285921 Helianthus annuus HOM05D005513 ORTHO05D006848 8.2e-117 424.5 295 69.5
THA.LOC104801693 Tarenaya hassleriana HOM05D005513 ORTHO05D006848 1.8e-116 423.3 300 66.7
Aqoxy2G04162 Aquilegia oxysepala HOM05D005513 ORTHO05D006848 3.1e-116 422.5 300 67.7
Hund12358 Selenicereus undatus HOM05D005513 ORTHO05D006848 3.1e-116 422.5 300 66.7
FAN28G1408 Fragaria x ananassa HOM05D005513 ORTHO05D006848 6.9e-116 421.4 320 65.3
Lsat_1_v5_gn_2_40261 Lactuca sativa HOM05D005513 ORTHO05D006848 1.3e-114 417.2 322 65.2
CAN.G2107.3 Capsicum annuum HOM05D005513 ORTHO05D006848 2.2e-114 416.4 292 71.6
MD15G1148400 Malus domestica HOM05D005513 ORTHO05D006848 8.5e-114 414.5 282 71.6
CsaV3_6G032350 Cucumis sativus L. HOM05D005513 ORTHO05D006848 4.2e-113 412.1 311 65.6
Aa31LG3G16700 Aethionema arabicum HOM05D005513 ORTHO05D006848 1.2e-112 410.6 297 65.3
Eucgr.G01603 Eucalyptus grandis HOM05D005513 ORTHO05D006848 1.6e-112 410.2 297 69.0
AL6G20970 Arabidopsis lyrata HOM05D005513 ORTHO05D006848 4.6e-112 408.7 297 65.3
ECA238G0802 Erigeron canadensis HOM05D005513 ORTHO05D006848 1.8e-111 406.8 279 69.9
CARHR202830 Cardamine hirsuta HOM05D005513 ORTHO05D006848 6.7e-111 404.8 298 65.8
Sp6g32980 Schrenkiella parvula HOM05D005513 ORTHO05D006848 9.7e-110 401.0 297 65.7
Thhalv10014198m.g Eutrema salsugineum HOM05D005513 ORTHO05D006848 1.3e-109 400.6 297 65.0
SEGI_26385 Sequoiadendron giganteum HOM05D005513 ORTHO05D006848 1.3e-109 400.6 301 62.1
MELO3C011447.2 Cucumis melo HOM05D005513 ORTHO05D006848 6.3e-109 398.3 345 60.0
Lj6A199G41 Lonicera japonica HOM05D005513 ORTHO05D006848 2.4e-108 396.4 286 68.9
AT5G10460 Arabidopsis thaliana HOM05D005513 ORTHO05D006848 4.1e-108 395.6 297 64.0
A02p00500 Brassica napus HOM05D005513 ORTHO05D006848 4.1e-108 395.6 298 64.8
Carub.0006s0894 Capsella rubella HOM05D005513 ORTHO05D006848 5.3e-108 395.2 298 64.1
BcaB05g21485 Brassica carinata HOM05D005513 ORTHO05D006848 6.9e-108 394.8 298 64.4
C02p04480 Brassica napus HOM05D005513 ORTHO05D006848 6.9e-108 394.8 298 64.4
BraA02t05034Z Brassica rapa HOM05D005513 ORTHO05D006848 2.0e-107 393.3 298 63.8
BolC2t06408H Brassica oleracea HOM05D005513 ORTHO05D006848 1.0e-106 391.0 298 63.8
BcaC03g13313 Brassica carinata HOM05D005513 ORTHO05D006848 1.6e-104 383.6 298 63.4
Dinv33223 Davidia involucrata HOM05D005513 ORTHO05D006848 6.1e-104 381.7 250 73.6
Solyc12g038820.1 Solanum lycopersicum HOM05D005513 ORTHO05D006848 1.0e-98 364.4 251 71.7
CAN.G575.78 Capsicum annuum HOM05D005513 ORTHO05D006848 1.3e-98 364.0 250 71.2
SGA_v2.0_scaffold122G33215 Striga asiatica HOM05D005513 ORTHO05D006848 2.2e-98 363.2 280 64.6
ClCG08G010170 Citrullus lanatus HOM05D005513 ORTHO05D006848 1.1e-97 360.9 311 60.1
CAN.G2075.11 Capsicum annuum HOM05D005513 ORTHO05D006848 5.5e-97 358.6 314 60.5
Sc19g0006410 Simmondsia chinensis HOM05D005513 ORTHO05D006848 5.5e-97 358.6 250 70.0
SMO119G0305 Selaginella moellendorffii HOM05D005513 ORTHO05D006848 4.0e-95 352.4 300 55.3
Nitab4.5_0002604g0050 Nicotiana tabacum HOM05D005513 ORTHO05D006848 8.8e-95 351.3 288 62.2
Nitab4.5_0000241g0250 Nicotiana tabacum HOM05D005513 ORTHO05D006848 1.2e-88 330.9 258 64.0
DCAR_005450 Daucus carota HOM05D005513 ORTHO05D006848 6.3e-85 318.5 225 69.8
Haze_01354 Corylus avellana HOM05D005513 ORTHO05D006848 2.0e-78 297.0 210 68.1
CAN.G2075.13 Capsicum annuum HOM05D005513 ORTHO05D006848 2.4e-76 290.0 235 64.3
Lj6A58T47 Lonicera japonica HOM05D005513 ORTHO05D006848 1.7e-74 283.9 203 68.5
MCO04G248 Micromonas commoda HOM05D005513 ORTHO05D006848 5.7e-70 268.9 333 45.0
Medtr4g087600 Medicago truncatula HOM05D005513 ORTHO05D006848 8.6e-66 255.0 208 59.6
CAN.G181.20 Capsicum annuum HOM05D005513 ORTHO05D006848 3.6e-64 249.6 191 65.4
AUR62021707 Chenopodium quinoa HOM05D005513 ORTHO05D006848 3.7e-61 239.6 186 64.5
PRCOL_00005454 Prasinoderma coloniale HOM05D005513 ORTHO05D006848 2.8e-56 223.4 282 45.7
Cre14.g609300 Chlamydomonas reinhardtii HOM05D005513 ORTHO05D006848 4.6e-51 206.1 322 37.9
Lj6A193T36 Lonicera japonica HOM05D005513 ORTHO05D006848 1.7e-50 204.1 175 63.4
CAN.G1565.3 Capsicum annuum HOM05D005513 ORTHO05D006848 6.6e-50 202.2 300 41.3
Gorai.004G148900 Gossypium raimondii HOM05D005513 ORTHO05D006848 1.9e-49 200.7 150 67.3
CAN.G1703.16 Capsicum annuum HOM05D005513 ORTHO05D006848 4.3e-49 199.5 142 71.1
SHI25989 Sapria himalayana HOM05D000105 ORTHO05D000023 1.7e-45 187.6 152 59.2
Lj6A58T48 Lonicera japonica HOM05D005513 ORTHO05D006848 1.2e-35 154.8 115 67.8
Cc00_g04390 Coffea canephora HOM05D005513 ORTHO05D006848 8.7e-34 148.7 109 64.2
Lj6A203T27 Lonicera japonica HOM05D005513 ORTHO05D006848 5.8e-30 136.0 100 63.0
CAN.G1703.15 Capsicum annuum HOM05D005513 ORTHO05D006848 7.1e-28 129.0 91 69.2
CAN.G12630.1 Capsicum annuum HOM05D005513 ORTHO05D006848 3.4e-22 110.2 79 68.4
Lj6A203G20 Lonicera japonica HOM05D005513 ORTHO05D006848 1.6e-19 101.3 175 37.7
EL10Ac7g16782 Beta vulgaris HOM05D005513 ORTHO05D006848 1.0e-18 98.6 66 71.2
Lj6C203G2 Lonicera japonica HOM05D005513 ORTHO05D006848 1.1e-17 95.1 77 63.6
RcHm_v2.0_Chr2g0085051 Rosa chinensis HOM05D005513 ORTHO05D343180 1.4e-15 88.2 85 54.1
Lj6A230T44 Lonicera japonica HOM05D005513 ORTHO05D006848 1.4e-12 78.2 53 75.5
SHI25988 Sapria himalayana HOM05D000105 ORTHO05D000023 2.5e-12 77.4 81 48.1
Lj6A192T18 Lonicera japonica HOM05D005513 ORTHO05D006848 5.3e-07 59.7 55 47.3
SHI25987 Sapria himalayana HOM05D005513 ORTHO05D006848 1.2e-06 58.5 49 53.1


User provided reference genes

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