Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_011628 Vanilla planifolia HOM05D006531 ORTHO05D007905 2.2e-301 1038.1 510 100.0
TAR628G0973 Trochodendron aralioides HOM05D006531 ORTHO05D007905 4.8e-102 375.9 555 42.3
PSO675G3692 Papaver somniferum HOM05D006531 ORTHO05D007905 5.3e-101 372.5 558 41.0
PSO541G5850 Papaver somniferum HOM05D006531 ORTHO05D007905 6.5e-99 365.5 548 39.1
Os02g0130900 Oryza sativa ssp. japonica HOM05D006531 ORTHO05D007905 8.7e-96 355.1 556 39.7
Rhsim08G0121800 Rhododendron simsii HOM05D006531 ORTHO05D007905 2.8e-94 350.1 530 40.2
MD15G1254500 Malus domestica HOM05D006531 ORTHO05D007905 3.1e-93 346.7 529 39.3
GSVIVG01018883001 Vitis vinifera HOM05D006531 ORTHO05D007905 5.3e-93 345.9 518 40.7
Dinv05610 Davidia involucrata HOM05D006531 ORTHO05D007905 6.9e-93 345.5 516 40.7
Cpa.g.sc89.75 Carica papaya HOM05D006531 ORTHO05D007905 9.0e-93 345.1 545 39.3
Duzib187G1823 Durio zibethinus HOM05D006531 ORTHO05D007905 9.0e-93 345.1 545 39.4
Actinidia35619 Actinidia chinensis HOM05D006531 ORTHO05D007905 3.4e-92 343.2 548 39.4
Aqoxy6G01185 Aquilegia oxysepala HOM05D006531 ORTHO05D007905 3.4e-92 343.2 574 36.6
Haze_03846 Corylus avellana HOM05D006531 ORTHO05D007905 3.4e-92 343.2 545 40.2
Gohir.D11G188400 Gossypium hirsutum HOM05D006531 ORTHO05D007905 3.4e-92 343.2 535 38.7
Gorai.007G200500 Gossypium raimondii HOM05D006531 ORTHO05D007905 2.2e-91 340.5 535 38.5
vmacro17801 Vaccinium macrocarpon HOM05D006531 ORTHO05D007905 1.1e-90 338.2 570 38.4
Ciclev10025250m.g Citrus clementina HOM05D006531 ORTHO05D007905 4.2e-90 336.3 553 38.2
COL.COLO4_22012 Corchorus olitorius HOM05D006531 ORTHO05D007905 1.6e-89 334.3 532 38.5
Psat4g096120 Pisum sativum HOM05D006531 ORTHO05D007905 1.6e-89 334.3 503 39.0
Potri.007G019733 Populus trichocarpa HOM05D006531 ORTHO05D007905 1.6e-89 334.3 552 37.0
Thecc.01G028000 Theobroma cacao HOM05D006531 ORTHO05D007905 2.1e-89 334.0 534 37.6
ATR0585G072 Amborella trichopoda HOM05D006531 ORTHO05D007905 7.9e-89 332.0 510 39.0
CANSAT21G1927 Cannabis sativa HOM05D006531 ORTHO05D007905 2.3e-88 330.5 537 39.9
TWI53G1729 Tripterygium wilfordii HOM05D006531 ORTHO05D007905 2.3e-88 330.5 539 38.6
CDE04G2389 Ceratophyllum demersum HOM05D006531 ORTHO05D007905 5.1e-88 329.3 557 39.1
FvH4_1g12740 Fragaria vesca HOM05D006531 ORTHO05D007905 3.3e-87 326.6 533 38.8
FAN19G3073 Fragaria x ananassa HOM05D006531 ORTHO05D007905 5.7e-87 325.9 536 39.2
Potri.007G019800 Populus trichocarpa HOM05D006531 ORTHO05D007905 5.7e-87 325.9 549 36.8
SalBow8G4669 Salvia bowleyana HOM05D006531 ORTHO05D007905 5.7e-87 325.9 536 38.2
QL06p035210 Quercus lobata HOM05D006531 ORTHO05D007905 7.4e-87 325.5 569 37.3
PGR102G2490 Punica granatum HOM05D006531 ORTHO05D007905 9.7e-87 325.1 521 37.6
RcHm_v2.0_Chr2g0100811 Rosa chinensis HOM05D006531 ORTHO05D007905 9.7e-87 325.1 527 39.7
Atru.chr3.665 Acer truncatum HOM05D006531 ORTHO05D007905 2.8e-86 323.6 556 36.3
FAN26G0669 Fragaria x ananassa HOM05D006531 ORTHO05D007905 3.7e-86 323.2 527 40.4
FAN23G2909 Fragaria x ananassa HOM05D006531 ORTHO05D007905 8.2e-86 322.0 536 38.6
Prupe.7G159100 Prunus persica HOM05D006531 ORTHO05D007905 1.8e-85 320.9 474 39.2
MSTRG.23258 Avicennia marina HOM05D006531 ORTHO05D007905 2.4e-85 320.5 538 38.7
PGSC0003DMG400022568 Solanum tuberosum HOM05D006531 ORTHO05D007905 4.1e-85 319.7 520 39.4
Lsat_1_v5_gn_4_151921 Lactuca sativa HOM05D006531 ORTHO05D007905 5.3e-85 319.3 518 38.4
FAN28G0612 Fragaria x ananassa HOM05D006531 ORTHO05D007905 6.9e-85 318.9 527 40.0
THA.LOC104819768 Tarenaya hassleriana HOM05D006531 ORTHO05D007905 9.1e-85 318.5 530 38.9
TPR.G21544 Trifolium pratense HOM05D006531 ORTHO05D007905 1.2e-84 318.2 503 38.2
VMungo0251G0240 Vigna mungo HOM05D006531 ORTHO05D007905 1.5e-84 317.8 508 38.2
Lalb_Chr16g0391021 Lupinus albus HOM05D006531 ORTHO05D007905 2.6e-84 317.0 508 37.6
Sopen03g006510 Solanum pennellii HOM05D006531 ORTHO05D007905 5.9e-84 315.8 522 39.3
arahy.Tifrunner.gnm1.ann1.P54VLQ Arachis hypogaea HOM05D006531 ORTHO05D007905 7.7e-84 315.5 525 38.1
Ca_22340_v3 Cicer arietinum L. HOM05D006531 ORTHO05D007905 1.0e-83 315.1 505 36.4
Oeu056763.1 Olea europaea HOM05D006531 ORTHO05D007905 3.8e-83 313.2 548 38.1
Solyc03g033720.4 Solanum lycopersicum HOM05D006531 ORTHO05D007905 5.0e-83 312.8 522 38.3
Cc07_g10020 Coffea canephora HOM05D006531 ORTHO05D007905 8.5e-83 312.0 538 39.2
Migut.H02514 Erythranthe guttata HOM05D006531 ORTHO05D007905 8.5e-83 312.0 521 37.2
Medtr8g076860 Medicago truncatula HOM05D006531 ORTHO05D007905 8.5e-83 312.0 502 37.1
Sc07g0000880 Simmondsia chinensis HOM05D006531 ORTHO05D007905 8.5e-83 312.0 522 38.5
CsaV3_6G046680 Cucumis sativus L. HOM05D006531 ORTHO05D007905 1.4e-82 311.2 537 36.5
arahy.Tifrunner.gnm1.ann1.WDDE23 Arachis hypogaea HOM05D006531 ORTHO05D007905 1.9e-82 310.8 525 38.5
ECA232G0312 Erigeron canadensis HOM05D006531 ORTHO05D007905 5.5e-82 309.3 515 37.3
Hund14004 Selenicereus undatus HOM05D006531 ORTHO05D007905 9.4e-82 308.5 524 37.0
Lj4g0004916 Lotus japonicus HOM05D006531 ORTHO05D007905 1.2e-81 308.1 504 38.9
DCAR_001553 Daucus carota HOM05D006531 ORTHO05D007905 3.6e-81 306.6 538 38.3
Glyma.02G053000 Glycine max HOM05D006531 ORTHO05D007905 4.7e-81 306.2 519 38.2
MELO3C007866.2 Cucumis melo HOM05D006531 ORTHO05D007905 6.1e-81 305.8 529 36.1
Thhalv10003992m.g Eutrema salsugineum HOM05D006531 ORTHO05D007905 1.4e-80 304.7 513 38.8
Aa31LG2G5790 Aethionema arabicum HOM05D006531 ORTHO05D007905 1.8e-80 304.3 506 39.9
Atru.BG.101.p Acer truncatum HOM05D006531 ORTHO05D007905 3.9e-80 303.1 514 36.4
Eucgr.J02379 Eucalyptus grandis HOM05D006531 ORTHO05D007905 5.1e-80 302.8 519 37.4
Nitab4.5_0011360g0010 Nicotiana tabacum HOM05D006531 ORTHO05D007905 8.8e-80 302.0 540 37.4
EL10As8g23896 Beta vulgaris HOM05D006531 ORTHO05D007905 1.3e-78 298.1 526 36.1
ClCG01G019940 Citrullus lanatus HOM05D006531 ORTHO05D008656 1.3e-78 298.1 565 35.8
Sabra07G0016900 Salix brachista HOM05D006531 ORTHO05D007905 6.3e-78 295.8 492 36.2
Ah.03g141200 Amaranthus hybridus HOM05D006531 ORTHO05D007905 1.1e-77 295.0 529 35.9
CAN.G753.1 Capsicum annuum HOM05D006531 ORTHO05D007905 1.8e-77 294.3 495 37.6
Sp2g15880 Schrenkiella parvula HOM05D006531 ORTHO05D007905 1.8e-77 294.3 524 36.6
AL5G15610 Arabidopsis lyrata HOM05D006531 ORTHO05D007905 9.1e-77 292.0 513 36.8
BcaC06g33892 Brassica carinata HOM05D006531 ORTHO05D007905 2.0e-76 290.8 509 37.3
AT3G26750 Arabidopsis thaliana HOM05D006531 ORTHO05D007905 2.6e-76 290.4 509 37.3
C07p35780 Brassica napus HOM05D006531 ORTHO05D007905 2.6e-76 290.4 505 37.4
Gohir.D11G322533 Gossypium hirsutum HOM05D006531 ORTHO05D007905 3.4e-76 290.0 513 36.5
Nitab4.5_0001289g0010 Nicotiana tabacum HOM05D006531 ORTHO05D007905 5.9e-76 289.3 566 35.0
BolC7t44097H Brassica oleracea HOM05D006531 ORTHO05D007905 7.7e-76 288.9 505 37.2
BcaC06g31044 Brassica carinata HOM05D006531 ORTHO05D007905 1.0e-75 288.5 505 37.2
CARHR147820 Cardamine hirsuta HOM05D006531 ORTHO05D007905 1.0e-75 288.5 513 38.0
A06p41760 Brassica napus HOM05D006531 ORTHO05D007905 2.5e-74 283.9 511 37.0
BraA06t27096Z Brassica rapa HOM05D006531 ORTHO05D007905 2.5e-74 283.9 511 37.0
Lj2C458T7 Lonicera japonica HOM05D006531 ORTHO05D007905 7.2e-74 282.3 446 42.4
MBI16_g36847_MAGBIO Magnolia biondii HOM05D006531 ORTHO05D007905 9.4e-74 282.0 445 38.9
AUR62004101 Chenopodium quinoa HOM05D006531 ORTHO05D007905 1.6e-73 281.2 536 34.9
HanXRQChr09g0261281 Helianthus annuus HOM05D006531 ORTHO05D007905 2.7e-73 280.4 515 36.1
AUR62007614 Chenopodium quinoa HOM05D006531 ORTHO05D007905 3.6e-73 280.0 533 34.1
CiPaw.07G051400 Carya illinoinensis HOM05D006531 ORTHO05D007905 4.5e-68 263.1 414 40.3
Peaxi162Scf00010g00816 Petunia axillaris HOM05D006531 ORTHO05D007905 1.2e-63 248.4 510 34.1
Carub.0005s0479 Capsella rubella HOM05D006531 ORTHO05D007905 1.1e-61 241.9 420 36.7
unitig_0.g471 Utricularia gibba HOM05D006531 ORTHO05D007905 7.0e-61 239.2 463 35.2
Manes.02G098000 Manihot esculenta HOM05D006531 ORTHO05D007905 1.6e-60 238.0 424 36.8
Gohir.A11G181766 Gossypium hirsutum HOM05D006531 ORTHO05D007905 6.5e-59 232.6 410 36.6
Sed0004808 Sechium edule HOM05D006531 ORTHO05D007905 8.5e-59 232.3 412 36.4
SGA_v2.0_scaffold12G06335 Striga asiatica HOM05D006531 ORTHO05D007905 1.5e-55 221.5 398 37.4
Zm00001eb209020 Zea mays HOM05D006531 ORTHO05D007905 1.6e-52 211.5 457 31.1
Hma1.2p1_3019F.1_g331750 Hydrangea macrophylla HOM05D006531 ORTHO05D007905 3.5e-52 210.3 365 37.5
Mapoly0011s0081 Marchantia polymorpha HOM05D006531 ORTHO05D007905 1.3e-51 208.4 588 28.6
MBI14_g29302_MAGBIO Magnolia biondii HOM05D006531 ORTHO05D007905 2.6e-47 194.1 191 53.4
Phvul.003G257166 Phaseolus vulgaris HOM05D006531 ORTHO05D007905 4.7e-41 173.3 194 45.9
Pp3c2_6980 Physcomitrium patens HOM05D006531 ORTHO05D007905 1.4e-40 171.8 568 27.8
Phvul.003G257232 Phaseolus vulgaris HOM05D006531 ORTHO05D007905 6.4e-38 162.9 243 39.1
Zm00001eb231290 Zea mays HOM05D006531 ORTHO05D007905 2.3e-35 154.5 195 44.1
AagrBONN_evm.TU.Sc2ySwM_368.1148 Anthoceros agrestis HOM05D006531 ORTHO05D007905 8.0e-33 146.0 449 25.6
Nn5g29702 Nelumbo nucifera HOM05D006531 ORTHO05D007905 3.3e-26 124.0 164 43.3
CSS0007477 Camellia sinensis var. sinensis HOM05D006531 ORTHO05D007905 4.7e-25 120.2 108 53.7
TAR376G0004 Trochodendron aralioides HOM05D006531 ORTHO05D007905 1.5e-23 115.2 141 48.2
vmacro23089 Vaccinium macrocarpon HOM05D006531 ORTHO05D007905 3.2e-21 107.5 137 41.6
SEGI_05601 Sequoiadendron giganteum HOM05D006531 ORTHO05D007905 1.2e-20 105.5 323 25.7
Carub.0006s2991 Capsella rubella HOM05D006531 ORTHO05D007905 6.6e-19 99.8 145 40.7
Lj2g0008134 Lotus japonicus HOM05D006531 ORTHO05D007905 1.1e-13 82.4 96 45.8
TAR376G0395 Trochodendron aralioides HOM05D006531 ORTHO05D007905 2.1e-09 68.2 100 41.0
Sc07g0000850 Simmondsia chinensis HOM05D006531 ORTHO05D007905 6.2e-09 66.6 74 44.6
CBR_g8866 Chara braunii HOM05D006531 ORTHO05D007905 4.0e-08 63.9 77 29.9


User provided reference genes

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