Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_011549 Vanilla planifolia HOM05D005538 ORTHO05D431340 2.5e-46 188.3 91 100.0
Actinidia22132 Actinidia chinensis HOM05D005538 ORTHO05D007055 1.3e-10 69.7 48 64.6
Actinidia30605 Actinidia chinensis HOM05D005538 ORTHO05D007055 1.4e-09 66.2 50 64.0
HanXRQChr06g0175181 Helianthus annuus HOM05D005538 ORTHO05D007055 1.4e-09 66.2 51 60.8
ATR0582G064 Amborella trichopoda HOM05D005538 ORTHO05D007055 1.9e-09 65.9 50 58.0
Sopen01g005330 Solanum pennellii HOM05D005538 ORTHO05D007055 1.9e-09 65.9 55 61.8
MBI07_g37483_MAGBIO Magnolia biondii HOM05D005538 ORTHO05D007055 2.5e-09 65.5 61 49.2
Solyc01g009780.3 Solanum lycopersicum HOM05D005538 ORTHO05D007055 2.5e-09 65.5 55 61.8
PGSC0003DMG400030010 Solanum tuberosum HOM05D005538 ORTHO05D007055 5.5e-09 64.3 55 60.0
Nitab4.5_0001600g0070 Nicotiana tabacum HOM05D005538 ORTHO05D007055 9.4e-09 63.5 55 56.4
Nn3g16327 Nelumbo nucifera HOM05D005538 ORTHO05D007055 1.6e-08 62.8 49 59.2
Dinv06880 Davidia involucrata HOM05D005538 ORTHO05D007055 2.7e-08 62.0 49 55.1
Peaxi162Scf00220g00119 Petunia axillaris HOM05D005538 ORTHO05D007055 2.7e-08 62.0 52 57.7
CDE05G2048 Ceratophyllum demersum HOM05D005538 ORTHO05D007055 3.6e-08 61.6 50 54.0
SGA_v2.0_scaffold80G25945 Striga asiatica HOM05D005538 ORTHO05D007055 3.6e-08 61.6 49 57.1
unitig_8.g3121 Utricularia gibba HOM05D005538 ORTHO05D007055 7.9e-08 60.5 47 61.7
CSS0040217 Camellia sinensis var. sinensis HOM05D005538 ORTHO05D007055 1.8e-07 59.3 51 60.8
CDE05G1586 Ceratophyllum demersum HOM05D005538 ORTHO05D007055 1.8e-07 59.3 50 52.0
vmacro22631 Vaccinium macrocarpon HOM05D005538 ORTHO05D007055 2.3e-07 58.9 57 54.4
Gohir.A12G140500 Gossypium hirsutum HOM05D005538 ORTHO05D007055 3.0e-07 58.5 49 57.1
Oeu003281.1 Olea europaea HOM05D005538 ORTHO05D007055 3.0e-07 58.5 50 56.0
COL.COLO4_34942 Corchorus olitorius HOM05D005538 ORTHO05D007055 5.1e-07 57.8 48 54.2
Hma1.2p1_0459F.1_g157240 Hydrangea macrophylla HOM05D005538 ORTHO05D007055 6.7e-07 57.4 56 51.8
Manes.09G185800 Manihot esculenta HOM05D005538 ORTHO05D007055 6.7e-07 57.4 48 56.2
TWI18G0823 Tripterygium wilfordii HOM05D005538 ORTHO05D007055 6.7e-07 57.4 49 59.2
Duzib052G1117 Durio zibethinus HOM05D005538 ORTHO05D007055 8.8e-07 57.0 49 55.1
Migut.K01033 Erythranthe guttata HOM05D005538 ORTHO05D007055 1.1e-06 56.6 52 53.8
Eucgr.B03544 Eucalyptus grandis HOM05D005538 ORTHO05D007055 1.1e-06 56.6 69 42.0
Gohir.D12G145100 Gossypium hirsutum HOM05D005538 ORTHO05D007055 1.1e-06 56.6 48 56.2
SalBow2G1516 Salvia bowleyana HOM05D005538 ORTHO05D007055 1.1e-06 56.6 49 55.1
Gorai.008G156500 Gossypium raimondii HOM05D005538 ORTHO05D007055 1.5e-06 56.2 48 56.2
Hund25495 Selenicereus undatus HOM05D005538 ORTHO05D007055 1.5e-06 56.2 61 50.8
MD13G1126300 Malus domestica HOM05D005538 ORTHO05D007055 2.0e-06 55.8 49 55.1
PSO017G1114 Papaver somniferum HOM05D005538 ORTHO05D007055 2.0e-06 55.8 59 47.5
PSO478G3672 Papaver somniferum HOM05D005538 ORTHO05D007055 2.0e-06 55.8 59 47.5
FAN12G2387 Fragaria x ananassa HOM05D005538 ORTHO05D007055 2.6e-06 55.5 48 50.0
Prupe.1G219100 Prunus persica HOM05D005538 ORTHO05D007055 2.6e-06 55.5 49 55.1
Thecc.02G196400 Theobroma cacao HOM05D005538 ORTHO05D007055 3.3e-06 55.1 49 55.1
Cfa009412 Carpinus fangiana HOM05D005538 ORTHO05D007055 4.4e-06 54.7 49 55.1
CiPaw.05G104000 Carya illinoinensis HOM05D005538 ORTHO05D007055 4.4e-06 54.7 49 55.1
FvH4_4g23080 Fragaria vesca HOM05D005538 ORTHO05D007055 4.4e-06 54.7 45 55.6
FAN07G2678 Fragaria x ananassa HOM05D005538 ORTHO05D007055 4.4e-06 54.7 45 55.6
RcHm_v2.0_Chr4g0429351 Rosa chinensis HOM05D005538 ORTHO05D007055 4.4e-06 54.7 45 57.8
Manes.08G103200 Manihot esculenta HOM05D005538 ORTHO05D007055 5.7e-06 54.3 48 50.0
Haze_12470 Corylus avellana HOM05D005538 ORTHO05D007055 7.4e-06 53.9 49 55.1
CANSAT56G2313 Cannabis sativa HOM05D005538 ORTHO05D007055 9.7e-06 53.5 49 51.0
CAN.G1277.4 Capsicum annuum HOM05D005538 ORTHO05D007055 9.7e-06 53.5 61 45.9
FAN17G2587 Fragaria x ananassa HOM05D005538 ORTHO05D007055 9.7e-06 53.5 45 53.3
Os02g0515600 Oryza sativa ssp. japonica HOM05D005538 ORTHO05D007055 9.7e-06 53.5 47 55.3


User provided reference genes

Program Settings