Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_011352 Vanilla planifolia HOM05D006743 ORTHO05D008518 1.3e-134 483.0 247 100.0
PGR119G0901 Punica granatum HOM05D006743 ORTHO05D008518 5.9e-98 361.3 242 74.4
MBI02_g23683_MAGBIO Magnolia biondii HOM05D006743 ORTHO05D008518 1.3e-97 360.1 243 74.5
FAN22G1517 Fragaria x ananassa HOM05D006743 ORTHO05D008518 2.1e-95 352.8 243 70.0
Gohir.A12G165400 Gossypium hirsutum HOM05D006743 ORTHO05D008518 3.6e-95 352.1 243 72.4
FvH4_4g31470 Fragaria vesca HOM05D006743 ORTHO05D008518 6.1e-95 351.3 243 69.5
Os10g0406800 Oryza sativa ssp. japonica HOM05D006743 ORTHO05D008518 8.0e-95 350.9 242 70.2
CDE02G3655 Ceratophyllum demersum HOM05D006743 ORTHO05D008518 1.2e-93 347.1 243 70.8
Haze_12021 Corylus avellana HOM05D006743 ORTHO05D008518 1.2e-93 347.1 243 71.2
Cpa.g.sc128.13 Carica papaya HOM05D006743 ORTHO05D008518 1.5e-93 346.7 242 72.7
Gohir.D12G168500 Gossypium hirsutum HOM05D006743 ORTHO05D008518 3.4e-93 345.5 243 71.2
TAR622G0326 Trochodendron aralioides HOM05D006743 ORTHO05D008518 3.4e-93 345.5 242 71.9
CiPaw.06G083800 Carya illinoinensis HOM05D006743 ORTHO05D008518 4.4e-93 345.1 243 71.6
RcHm_v2.0_Chr4g0439961 Rosa chinensis HOM05D006743 ORTHO05D008518 4.4e-93 345.1 242 69.0
Atru.chr11.1802 Acer truncatum HOM05D006743 ORTHO05D008518 5.7e-93 344.7 243 71.2
Nn3g17215 Nelumbo nucifera HOM05D006743 ORTHO05D008518 1.7e-92 343.2 242 72.7
Lalb_Chr16g0385831 Lupinus albus HOM05D006743 ORTHO05D008518 8.3e-92 340.9 243 70.0
THA.LOC104805154 Tarenaya hassleriana HOM05D006743 ORTHO05D008518 8.3e-92 340.9 242 70.7
CSS0008818 Camellia sinensis var. sinensis HOM05D006743 ORTHO05D008518 1.1e-91 340.5 243 70.4
Potri.013G124050 Populus trichocarpa HOM05D006743 ORTHO05D008518 1.4e-91 340.1 243 70.4
MD16G1074200 Malus domestica HOM05D006743 ORTHO05D008518 3.1e-91 339.0 243 69.1
arahy.Tifrunner.gnm1.ann1.0ELP1Z Arachis hypogaea HOM05D006743 ORTHO05D008518 4.1e-91 338.6 241 70.1
TWI12G0418 Tripterygium wilfordii HOM05D006743 ORTHO05D008518 4.1e-91 338.6 246 67.5
GSVIVG01020003001 Vitis vinifera HOM05D006743 ORTHO05D008518 5.4e-91 338.2 242 69.4
arahy.Tifrunner.gnm1.ann1.MT78EL Arachis hypogaea HOM05D006743 ORTHO05D008518 9.1e-91 337.4 241 69.7
Glyma.08G300451 Glycine max HOM05D006743 ORTHO05D008518 1.2e-90 337.0 244 70.1
Dinv16636 Davidia involucrata HOM05D006743 ORTHO05D008518 1.6e-90 336.7 235 72.3
COL.COLO4_22995 Corchorus olitorius HOM05D006743 ORTHO05D008518 2.0e-90 336.3 243 68.7
Zm00001eb223220 Zea mays HOM05D006743 ORTHO05D008518 2.0e-90 336.3 236 69.5
Glyma.18G120051 Glycine max HOM05D006743 ORTHO05D008518 4.5e-90 335.1 243 70.0
Manes.01G186600 Manihot esculenta HOM05D006743 ORTHO05D008518 7.7e-90 334.3 235 70.6
Rhsim12G0063200 Rhododendron simsii HOM05D006743 ORTHO05D008518 7.7e-90 334.3 243 70.4
Sabra13G0103000 Salix brachista HOM05D006743 ORTHO05D008518 1.7e-89 333.2 235 70.6
VMungo0251G3125 Vigna mungo HOM05D006743 ORTHO05D008518 2.2e-89 332.8 243 67.9
HanXRQChr12g0362551 Helianthus annuus HOM05D006743 ORTHO05D008518 2.9e-89 332.4 242 71.1
Lj4g0006351 Lotus japonicus HOM05D006743 ORTHO05D008518 6.5e-89 331.3 234 70.9
CANSAT80G2808 Cannabis sativa HOM05D006743 ORTHO05D008518 8.5e-89 330.9 243 67.1
MELO3C024128.2 Cucumis melo HOM05D006743 ORTHO05D008518 8.5e-89 330.9 235 69.4
CsaV3_7G025360 Cucumis sativus L. HOM05D006743 ORTHO05D008518 8.5e-89 330.9 235 69.8
Potri.019G092000 Populus trichocarpa HOM05D006743 ORTHO05D008518 1.9e-88 329.7 242 67.4
Ca_24218_v3 Cicer arietinum L. HOM05D006743 ORTHO05D008518 2.5e-88 329.3 243 67.9
Medtr8g055880 Medicago truncatula HOM05D006743 ORTHO05D008518 2.5e-88 329.3 243 67.5
TPR.G31812 Trifolium pratense HOM05D006743 ORTHO05D008518 3.2e-88 328.9 243 67.5
Hma1.2p1_0598F.1_g186630 Hydrangea macrophylla HOM05D006743 ORTHO05D008518 4.2e-88 328.6 235 71.1
EL10Ac6g13192 Beta vulgaris HOM05D006743 ORTHO05D008518 5.5e-88 328.2 241 69.3
Lsat_1_v5_gn_8_52820 Lactuca sativa HOM05D006743 ORTHO05D008518 9.4e-88 327.4 242 69.4
Aa31LG1G750 Aethionema arabicum HOM05D006743 ORTHO05D008518 1.2e-87 327.0 242 66.9
Psat4g134120 Pisum sativum HOM05D006743 ORTHO05D008518 1.6e-87 326.6 242 67.8
AT1G14300 Arabidopsis thaliana HOM05D006743 ORTHO05D008518 2.7e-87 325.9 242 67.4
Sp1g12650 Schrenkiella parvula HOM05D006743 ORTHO05D008518 2.7e-87 325.9 242 68.2
AL1G26180 Arabidopsis lyrata HOM05D006743 ORTHO05D008518 3.6e-87 325.5 242 66.9
Cc11_g13110 Coffea canephora HOM05D006743 ORTHO05D008518 3.6e-87 325.5 238 69.3
Peaxi162Scf00541g00528 Petunia axillaris HOM05D006743 ORTHO05D008518 3.6e-87 325.5 242 68.6
Carub.0001s1398 Capsella rubella HOM05D006743 ORTHO05D008518 6.1e-87 324.7 242 66.5
ECA233G3761 Erigeron canadensis HOM05D006743 ORTHO05D008518 6.1e-87 324.7 242 67.8
AUR62028791 Chenopodium quinoa HOM05D006743 ORTHO05D008518 8.0e-87 324.3 241 68.5
PSO478G0657 Papaver somniferum HOM05D006743 ORTHO05D008518 1.8e-86 323.2 242 66.9
ClCG09G009490 Citrullus lanatus HOM05D006743 ORTHO05D008518 2.3e-86 322.8 224 71.0
Lj3C1038T21 Lonicera japonica HOM05D006743 ORTHO05D008518 5.2e-86 321.6 241 66.8
MSTRG.13418 Avicennia marina HOM05D006743 ORTHO05D008518 6.8e-86 321.2 242 66.9
Hund05886 Selenicereus undatus HOM05D006743 ORTHO05D008518 6.8e-86 321.2 241 67.2
SalBow8G2540 Salvia bowleyana HOM05D006743 ORTHO05D008518 1.2e-85 320.5 235 67.2
Phvul.003G049600 Phaseolus vulgaris HOM05D006743 ORTHO05D008518 2.0e-85 319.7 234 67.9
CARHR014720 Cardamine hirsuta HOM05D006743 ORTHO05D008518 3.4e-85 318.9 242 66.9
vmacro01252 Vaccinium macrocarpon HOM05D006743 ORTHO05D008518 3.4e-85 318.9 280 62.1
DCAR_007148 Daucus carota HOM05D006743 ORTHO05D008518 7.5e-85 317.8 242 66.9
Aqoxy3G00673 Aquilegia oxysepala HOM05D006743 ORTHO05D008518 2.2e-84 316.2 242 65.7
FAN12G0030 Fragaria x ananassa HOM05D006743 ORTHO05D008518 3.7e-84 315.5 303 55.8
ATR0564G062 Amborella trichopoda HOM05D006743 ORTHO05D008518 1.8e-83 313.2 243 65.0
Solyc05g007440.3 Solanum lycopersicum HOM05D006743 ORTHO05D008518 1.8e-83 313.2 244 66.0
Sopen05g003320 Solanum pennellii HOM05D006743 ORTHO05D008518 1.8e-83 313.2 244 66.0
BcaC05g25323 Brassica carinata HOM05D006743 ORTHO05D008518 2.4e-83 312.8 242 65.3
A06p10280 Brassica napus HOM05D006743 ORTHO05D008518 2.4e-83 312.8 242 65.3
CAN.G58.36 Capsicum annuum HOM05D006743 ORTHO05D008518 2.4e-83 312.8 242 66.1
BraA06t24210Z Brassica rapa HOM05D006743 ORTHO05D008518 3.1e-83 312.4 242 65.3
unitig_22.g5546 Utricularia gibba HOM05D006743 ORTHO05D008518 3.1e-83 312.4 242 65.7
Thecc.02G350900 Theobroma cacao HOM05D006743 ORTHO05D008518 4.1e-83 312.0 243 66.3
C05p12050 Brassica napus HOM05D006743 ORTHO05D008518 7.0e-83 311.2 242 65.3
PGSC0003DMG400003385 Solanum tuberosum HOM05D006743 ORTHO05D008518 7.0e-83 311.2 244 65.6
Nitab4.5_0000703g0080 Nicotiana tabacum HOM05D006743 ORTHO05D008518 1.2e-82 310.5 243 65.4
Nitab4.5_0012364g0010 Nicotiana tabacum HOM05D006743 ORTHO05D008518 1.6e-82 310.1 243 65.4
BolC5t29959H Brassica oleracea HOM05D006743 ORTHO05D008518 7.7e-82 307.8 235 66.4
AUR62005766 Chenopodium quinoa HOM05D006743 ORTHO05D008518 6.6e-81 304.7 259 62.5
SGA_v2.0_scaffold389G50576 Striga asiatica HOM05D006743 ORTHO05D008518 1.4e-78 297.0 257 61.1
Hma1.2p1_0598F.1_g186620 Hydrangea macrophylla HOM05D006743 ORTHO05D008518 3.7e-76 288.9 193 74.1
Migut.E00100 Erythranthe guttata HOM05D006743 ORTHO05D008518 2.3e-73 279.6 198 70.7
Mapoly0146s0011 Marchantia polymorpha HOM05D006743 ORTHO05D008518 5.6e-72 275.0 238 56.7
Pp3c6_14800 Physcomitrium patens HOM05D006743 ORTHO05D008518 1.2e-69 267.3 244 54.9
Duzib268G1478 Durio zibethinus HOM05D006743 ORTHO05D008518 4.4e-69 265.4 243 59.3
Actinidia31893 Actinidia chinensis HOM05D006743 ORTHO05D008518 3.7e-68 262.3 242 55.4
Oeu045403.1 Olea europaea HOM05D006743 ORTHO05D008518 2.0e-66 256.5 170 73.5
Sed0013774 Sechium edule HOM05D006743 ORTHO05D008518 5.6e-64 248.4 245 55.1
BcaNung06708 Brassica carinata HOM05D006743 ORTHO05D008518 2.8e-63 246.1 242 54.5
Sc14g0008270 Simmondsia chinensis HOM05D006743 ORTHO05D008518 1.1e-62 244.2 195 63.6
SMO307G0042 Selaginella moellendorffii HOM05D006743 ORTHO05D008518 8.3e-60 234.6 227 50.7
AagrBONN_evm.TU.Sc2ySwM_344.2267 Anthoceros agrestis HOM05D006743 ORTHO05D008518 3.2e-59 232.6 235 48.9
Lsat_1_v5_gn_7_2081 Lactuca sativa HOM05D006743 ORTHO05D008518 3.3e-56 222.6 183 62.3
AagrBONN_evm.TU.Sc2ySwM_27.11 Anthoceros agrestis HOM05D006743 ORTHO05D008518 3.6e-55 219.2 235 46.0
DCAR_010724 Daucus carota HOM05D006743 ORTHO05D008518 4.9e-52 208.8 225 48.9
Peaxi162Scf00541g00531 Petunia axillaris HOM05D006743 ORTHO05D008518 6.4e-52 208.4 169 62.1
CBR_g41270 Chara braunii HOM05D006743 ORTHO05D008518 1.3e-44 184.1 246 40.2
AagrBONN_evm.TU.Sc2ySwM_27.9 Anthoceros agrestis HOM05D006743 ORTHO05D008518 3.8e-44 182.6 235 39.6
AagrBONN_evm.TU.Sc2ySwM_117.3556 Anthoceros agrestis HOM05D006743 ORTHO05D008518 8.4e-44 181.4 171 50.3
Sabra19G0105400 Salix brachista HOM05D006743 ORTHO05D008518 1.8e-38 163.7 234 43.6
QL03p064380 Quercus lobata HOM05D006743 ORTHO05D008518 1.9e-32 143.7 114 65.8
QL03p064376 Quercus lobata HOM05D006743 ORTHO05D008518 5.8e-29 132.1 83 75.9
Nn1g08820 Nelumbo nucifera HOM05D006743 ORTHO05D008518 3.2e-27 126.3 218 39.4
Nn4g22981 Nelumbo nucifera HOM05D006743 ORTHO05D008518 3.2e-27 126.3 218 39.4
Cre10.g437100 Chlamydomonas reinhardtii HOM05D006743 ORTHO05D008518 6.0e-26 122.1 233 31.8
SEGI_09156 Sequoiadendron giganteum HOM05D006743 ORTHO05D008518 1.5e-24 117.5 74 74.3
PRCOL_00003635 Prasinoderma coloniale HOM05D006743 ORTHO05D008518 5.0e-12 75.9 240 27.9
Oeu045402.1 Olea europaea HOM05D006743 ORTHO05D008518 1.5e-08 64.3 65 53.8
Ca_23751_v3 Cicer arietinum L. HOM05D005416 ORTHO05D007956 4.3e-08 62.8 66 50.0
Ca_27492_v3 Cicer arietinum L. HOM05D005416 ORTHO05D007956 4.3e-08 62.8 66 50.0
RcHm_v2.0_Chr5g0047461 Rosa chinensis HOM05D006743 ORTHO05D008518 6.9e-06 55.5 35 74.3


User provided reference genes

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