Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_011320 Vanilla planifolia HOM05D005434 ORTHO05D006412 0.0e+00 1638.2 849 100.0
MBI18_g03842_MAGBIO Magnolia biondii HOM05D005434 ORTHO05D006412 6.0e-49 200.3 844 28.7
TAR636G0087 Trochodendron aralioides HOM05D005434 ORTHO05D006412 3.3e-47 194.5 879 28.6
Manes.05G008100 Manihot esculenta HOM05D005434 ORTHO05D006412 1.8e-45 188.7 895 28.6
TAR365G0925 Trochodendron aralioides HOM05D005434 ORTHO05D006412 1.9e-42 178.7 863 27.9
Os10g0405500 Oryza sativa ssp. japonica HOM05D005434 ORTHO05D006412 4.6e-41 174.1 910 27.9
Aqoxy2G02439 Aquilegia oxysepala HOM05D005434 ORTHO05D006412 4.3e-39 167.5 892 27.1
Potri.014G111500 Populus trichocarpa HOM05D005434 ORTHO05D006412 4.3e-39 167.5 905 26.4
Thecc.01G326300 Theobroma cacao HOM05D005434 ORTHO05D006412 1.6e-38 165.6 871 26.5
Atru.chr5.851 Acer truncatum HOM05D005434 ORTHO05D006412 2.1e-38 165.2 893 26.5
Potri.002G186200 Populus trichocarpa HOM05D005434 ORTHO05D006412 4.8e-38 164.1 930 27.3
Dinv12078 Davidia involucrata HOM05D005434 ORTHO05D006412 1.1e-37 162.9 704 30.8
Zm00001eb233800 Zea mays HOM05D005434 ORTHO05D006412 1.2e-36 159.5 740 27.8
TPR.G3083 Trifolium pratense HOM05D005434 ORTHO05D006412 2.0e-36 158.7 709 26.1
QL12p035062 Quercus lobata HOM05D005434 ORTHO05D006412 2.6e-36 158.3 859 25.7
DCAR_005712 Daucus carota HOM05D005434 ORTHO05D006412 2.9e-35 154.8 889 25.6
MD09G1291300 Malus domestica HOM05D005434 ORTHO05D006412 4.9e-35 154.1 906 25.8
COL.COLO4_23119 Corchorus olitorius HOM05D005434 ORTHO05D006412 6.4e-35 153.7 871 26.8
Sabra14G0081900 Salix brachista HOM05D005434 ORTHO05D006412 8.4e-35 153.3 921 25.2
FAN23G2884 Fragaria x ananassa HOM05D005434 ORTHO05D006412 1.1e-34 152.9 905 25.7
Rhsim02G0256300 Rhododendron simsii HOM05D005434 ORTHO05D006412 2.4e-34 151.8 856 27.5
Duzib133G0025 Durio zibethinus HOM05D005434 ORTHO05D006412 1.6e-33 149.1 844 26.8
Duzib138G0614 Durio zibethinus HOM05D005434 ORTHO05D006412 1.6e-33 149.1 865 26.0
TWI14G0253 Tripterygium wilfordii HOM05D005434 ORTHO05D006412 1.6e-33 149.1 885 25.6
Psat6g158560 Pisum sativum HOM05D005434 ORTHO05D006412 6.0e-33 147.1 716 26.8
FvH4_1g26160 Fragaria vesca HOM05D005434 ORTHO05D006412 7.9e-33 146.7 920 24.3
Gohir.A11G105400 Gossypium hirsutum HOM05D005434 ORTHO05D006412 1.3e-32 146.0 896 26.8
Lj5g0001301 Lotus japonicus HOM05D005434 ORTHO05D006412 2.3e-32 145.2 892 26.0
CiPaw.08G081800 Carya illinoinensis HOM05D005434 ORTHO05D006412 6.6e-32 143.7 906 24.6
PGR142G2929 Punica granatum HOM05D005434 ORTHO05D006412 6.6e-32 143.7 963 24.5
RcHm_v2.0_Chr3g0485651 Rosa chinensis HOM05D005434 ORTHO05D006412 2.5e-31 141.7 907 24.8
Nn3g21972 Nelumbo nucifera HOM05D005434 ORTHO05D006412 3.3e-31 141.4 934 25.5
Gohir.D11G110300 Gossypium hirsutum HOM05D005434 ORTHO05D006412 5.6e-31 140.6 889 26.3
AT2G46980 Arabidopsis thaliana HOM05D005434 ORTHO05D006412 9.6e-31 139.8 881 24.5
Gorai.007G117900 Gossypium raimondii HOM05D005434 ORTHO05D006412 9.6e-31 139.8 894 25.8
FAN19G2204 Fragaria x ananassa HOM05D005434 ORTHO05D006412 1.3e-30 139.4 920 24.3
FAN26G2209 Fragaria x ananassa HOM05D005434 ORTHO05D006412 1.6e-30 139.0 872 26.1
Actinidia20964 Actinidia chinensis HOM05D005434 ORTHO05D006412 2.8e-30 138.3 886 25.6
PSO210G4596 Papaver somniferum HOM05D005434 ORTHO05D006412 2.8e-30 138.3 722 26.3
Gohir.A07G131800 Gossypium hirsutum HOM05D005434 ORTHO05D006412 3.6e-30 137.9 878 24.7
MBI19_g04828_MAGBIO Magnolia biondii HOM05D005434 ORTHO05D006412 1.8e-29 135.6 844 25.8
Gorai.001G148200 Gossypium raimondii HOM05D005434 ORTHO05D006412 6.9e-29 133.7 866 25.6
Medtr1g085710 Medicago truncatula HOM05D005434 ORTHO05D006412 6.9e-29 133.7 874 24.3
Lj1A7G43 Lonicera japonica HOM05D005434 ORTHO05D006412 2.0e-28 132.1 157 48.4
Peaxi162Scf00309g00625 Petunia axillaris HOM05D005434 ORTHO05D006412 2.0e-28 132.1 876 25.3
Prupe.3G001600 Prunus persica HOM05D005434 ORTHO05D006412 2.6e-28 131.7 855 24.7
CARHR142350 Cardamine hirsuta HOM05D005434 ORTHO05D006412 3.4e-28 131.3 884 23.3
Haze_05156 Corylus avellana HOM05D005434 ORTHO05D006412 3.4e-28 131.3 822 26.3
Ca_10237_v3 Cicer arietinum L. HOM05D005434 ORTHO05D006412 4.5e-28 131.0 700 26.3
Phvul.007G208600 Phaseolus vulgaris HOM05D005434 ORTHO05D006412 4.5e-28 131.0 879 25.3
Thhalv10001318m.g Eutrema salsugineum HOM05D005434 ORTHO05D006412 8.4e-27 126.7 871 24.8
Glyma.02G007100 Glycine max HOM05D005434 ORTHO05D006412 1.9e-26 125.6 873 24.4
Lalb_Chr02g0147201 Lupinus albus HOM05D005434 ORTHO05D006412 1.9e-26 125.6 188 40.4
Glyma.10G138700 Glycine max HOM05D005434 ORTHO05D006412 4.2e-26 124.4 903 23.9
GSVIVG01028239001 Vitis vinifera HOM05D005434 ORTHO05D006412 1.2e-25 122.9 140 49.3
Lsat_1_v5_gn_9_7120 Lactuca sativa HOM05D005434 ORTHO05D006412 1.6e-25 122.5 233 36.9
AL4G46460 Arabidopsis lyrata HOM05D005434 ORTHO05D006412 3.5e-25 121.3 900 23.0
VMungo0720G1215 Vigna mungo HOM05D005434 ORTHO05D006412 3.5e-25 121.3 378 27.2
DCAR_002941 Daucus carota HOM05D005434 ORTHO05D006412 1.0e-24 119.8 864 23.3
Carub.0004s2971 Capsella rubella HOM05D005434 ORTHO05D006412 5.1e-24 117.5 887 22.9
Sed0026347 Sechium edule HOM05D005434 ORTHO05D006412 5.1e-24 117.5 867 23.9
MD17G1286100 Malus domestica HOM05D005434 ORTHO05D006412 1.1e-23 116.3 894 23.4
AUR62011691 Chenopodium quinoa HOM05D005434 ORTHO05D006412 1.5e-23 115.9 868 23.5
Solyc01g079080.3 Solanum lycopersicum HOM05D005434 ORTHO05D006412 3.3e-23 114.8 876 23.5
Sc17g0000070 Simmondsia chinensis HOM05D005434 ORTHO05D006412 5.6e-23 114.0 160 42.5
Sopen01g030590 Solanum pennellii HOM05D005434 ORTHO05D006412 5.6e-23 114.0 895 24.2
CAN.G179.30 Capsicum annuum HOM05D005434 ORTHO05D006412 9.6e-23 113.2 671 25.0
Sed0005889 Sechium edule HOM05D005434 ORTHO05D006412 1.3e-22 112.8 888 24.3
SHI34042 Sapria himalayana HOM05D005434 ORTHO05D006412 1.6e-22 112.5 859 24.8
Sp4g28980 Schrenkiella parvula HOM05D005434 ORTHO05D006412 1.6e-22 112.5 873 23.1
CsaV3_6G012840 Cucumis sativus L. HOM05D005434 ORTHO05D006412 2.1e-22 112.1 873 24.1
Aa31LG1G28350 Aethionema arabicum HOM05D005434 ORTHO05D006412 6.2e-22 110.5 884 23.0
CDE02G0039 Ceratophyllum demersum HOM05D005434 ORTHO05D006412 6.2e-22 110.5 166 42.2
FAN28G1136 Fragaria x ananassa HOM05D005434 ORTHO05D006412 1.4e-21 109.4 978 23.7
BraA05t19085Z Brassica rapa HOM05D005434 ORTHO05D006412 2.4e-21 108.6 873 22.3
Cc01_g21750 Coffea canephora HOM05D005434 ORTHO05D006412 5.3e-21 107.5 212 37.3
CANSAT25G2989 Cannabis sativa HOM05D005434 ORTHO05D006412 6.9e-21 107.1 965 24.1
PGSC0003DMG400001122 Solanum tuberosum HOM05D005434 ORTHO05D006412 9.0e-21 106.7 892 23.5
Gohir.D07G136100 Gossypium hirsutum HOM05D005434 ORTHO05D006412 1.2e-20 106.3 817 25.3
ClCG02G017720 Citrullus lanatus HOM05D005434 ORTHO05D006412 1.5e-20 105.9 887 24.6
arahy.Tifrunner.gnm1.ann1.G6BN46 Arachis hypogaea HOM05D005434 ORTHO05D006412 2.0e-20 105.5 907 23.2
EL10Ac4g10377 Beta vulgaris HOM05D005434 ORTHO05D006412 3.4e-20 104.8 850 24.7
BcaC02g12826 Brassica carinata HOM05D005434 ORTHO05D006412 4.5e-20 104.4 193 34.7
C04p00990 Brassica napus HOM05D005434 ORTHO05D006412 5.8e-20 104.0 880 22.0
Sc17g0000050 Simmondsia chinensis HOM05D005434 ORTHO05D006412 7.6e-20 103.6 167 37.7
Migut.D00008 Erythranthe guttata HOM05D005434 ORTHO05D006412 1.0e-19 103.2 879 23.1
CiPaw.07G126400 Carya illinoinensis HOM05D005434 ORTHO05D006412 3.8e-19 101.3 126 44.4
BolC4t21751H Brassica oleracea HOM05D005434 ORTHO05D006412 4.9e-19 100.9 704 23.7
BcaC02g12619 Brassica carinata HOM05D005434 ORTHO05D006412 8.4e-19 100.1 706 24.1
Nitab4.5_0000222g0380 Nicotiana tabacum HOM05D005434 ORTHO05D006412 1.1e-18 99.8 853 23.0
SGA_v2.0_scaffold310G48189 Striga asiatica HOM05D005434 ORTHO05D006412 2.1e-17 95.5 173 36.4
ECA247G2130 Erigeron canadensis HOM05D005434 ORTHO05D008082 2.7e-17 95.1 874 22.3
Dinv33178 Davidia involucrata HOM05D005434 ORTHO05D006412 1.0e-16 93.2 107 50.5
A05p00820 Brassica napus HOM05D005434 ORTHO05D006412 1.8e-16 92.4 821 22.5
AUR62024551 Chenopodium quinoa HOM05D005434 ORTHO05D006412 1.8e-16 92.4 865 23.1
Ciclev10023478m.g Citrus clementina HOM05D005434 ORTHO05D006412 1.8e-16 92.4 94 51.1
Eucgr.K00557 Eucalyptus grandis HOM05D005434 ORTHO05D006412 2.5e-15 88.6 889 22.5
MELO3C013628.2 Cucumis melo HOM05D005434 ORTHO05D006412 1.3e-14 86.3 871 23.3
Nitab4.5_0003092g0060 Nicotiana tabacum HOM05D005434 ORTHO05D006412 5.3e-13 80.9 920 22.9
Cpa.g.sc57.27 Carica papaya HOM05D005434 ORTHO05D006412 2.6e-12 78.6 822 23.1
BcaB07g33880 Brassica carinata HOM05D005434 ORTHO05D006412 5.9e-12 77.4 217 29.0
GSVIVG01028240001 Vitis vinifera HOM05D005434 ORTHO05D006412 1.6e-09 69.3 324 26.2
unitig_62.g23901 Utricularia gibba HOM05D005434 ORTHO05D006412 2.1e-09 68.9 151 31.8
Dinv33176 Davidia involucrata HOM05D005434 ORTHO05D006412 8.7e-08 63.5 186 32.8
Ciclev10019510m.g Citrus clementina HOM05D005434 ORTHO05D006412 2.2e-06 58.9 476 23.9
CDE08G1326 Ceratophyllum demersum HOM05D005434 ORTHO05D006412 2.8e-06 58.5 71 45.1


User provided reference genes

Program Settings