Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_011281 Vanilla planifolia HOM05D006048 ORTHO05D007642 9.6e-217 756.5 375 100.0
HPP92_011303 Vanilla planifolia HOM05D006048 ORTHO05D007642 7.8e-211 736.9 375 97.9
MD04G1206500 Malus domestica HOM05D006048 ORTHO05D007642 7.7e-41 172.2 384 29.9
TAR636G0181 Trochodendron aralioides HOM05D006048 ORTHO05D007642 7.7e-41 172.2 391 30.7
Lj5g0003009 Lotus japonicus HOM05D006048 ORTHO05D007642 2.9e-40 170.2 387 30.2
Lalb_Chr21g0310721 Lupinus albus HOM05D006048 ORTHO05D007642 5.0e-40 169.5 374 31.3
Medtr1g082840 Medicago truncatula HOM05D006048 ORTHO05D007642 8.5e-40 168.7 374 30.7
QL03p006882 Quercus lobata HOM05D006048 ORTHO05D007642 1.9e-39 167.5 373 31.1
Potri.005G034100 Populus trichocarpa HOM05D006048 ORTHO05D007642 2.5e-39 167.2 389 32.9
Glyma.10G155100 Glycine max HOM05D006048 ORTHO05D007642 7.2e-39 165.6 372 29.3
Hma1.2p1_0928F.1_g237870 Hydrangea macrophylla HOM05D006048 ORTHO05D007642 7.2e-39 165.6 388 29.4
Rhsim07G0182400 Rhododendron simsii HOM05D006048 ORTHO05D007642 9.4e-39 165.2 375 31.2
Prupe.6G327100 Prunus persica HOM05D006048 ORTHO05D007642 1.2e-38 164.9 385 29.6
Eucgr.H04481 Eucalyptus grandis HOM05D006048 ORTHO05D007642 1.6e-38 164.5 202 39.6
Aqoxy2G03311 Aquilegia oxysepala HOM05D006048 ORTHO05D007642 2.7e-38 163.7 383 31.6
Dinv23949 Davidia involucrata HOM05D006048 ORTHO05D007642 6.1e-38 162.5 366 30.3
MD12G1220300 Malus domestica HOM05D006048 ORTHO05D007642 6.1e-38 162.5 381 29.9
Sabra05G0036000 Salix brachista HOM05D006048 ORTHO05D007642 6.1e-38 162.5 383 32.9
Manes.09G166100 Manihot esculenta HOM05D006048 ORTHO05D007642 8.0e-38 162.2 394 31.7
Potri.013G023600 Populus trichocarpa HOM05D006048 ORTHO05D007642 2.3e-37 160.6 389 31.9
PGR031G0290 Punica granatum HOM05D006048 ORTHO05D007642 2.3e-37 160.6 200 41.5
Haze_04204 Corylus avellana HOM05D006048 ORTHO05D007642 4.0e-37 159.8 393 29.0
Nitab4.5_0008677g0020 Nicotiana tabacum HOM05D006048 ORTHO05D007642 5.2e-37 159.5 386 29.8
Solyc01g098870.3 Solanum lycopersicum HOM05D006048 ORTHO05D007642 6.8e-37 159.1 376 31.1
Ca_10107_v3 Cicer arietinum L. HOM05D006048 ORTHO05D007642 1.2e-36 158.3 378 30.2
Sopen01g042410 Solanum pennellii HOM05D006048 ORTHO05D007642 1.2e-36 158.3 387 30.7
Os11g0148400 Oryza sativa ssp. japonica HOM05D006048 ORTHO05D007642 1.5e-36 157.9 214 39.3
Ah.06g189270 Amaranthus hybridus HOM05D006048 ORTHO05D007642 2.6e-36 157.1 379 28.8
Nitab4.5_0005388g0020 Nicotiana tabacum HOM05D006048 ORTHO05D007642 3.4e-36 156.8 386 29.3
CSS0040601 Camellia sinensis var. sinensis HOM05D006048 ORTHO05D007642 4.4e-36 156.4 376 29.0
Peaxi162Scf00037g00236 Petunia axillaris HOM05D006048 ORTHO05D007642 4.4e-36 156.4 383 31.1
PGSC0003DMG401028588 Solanum tuberosum HOM05D006048 ORTHO05D007642 4.4e-36 156.4 386 30.6
THA.LOC104805873 Tarenaya hassleriana HOM05D006048 ORTHO05D007642 4.4e-36 156.4 200 41.5
vmacro05021 Vaccinium macrocarpon HOM05D006048 ORTHO05D007642 5.7e-36 156.0 391 28.6
Sabra13G0025400 Salix brachista HOM05D006048 ORTHO05D007642 7.5e-36 155.6 387 30.7
Hund07062 Selenicereus undatus HOM05D006048 ORTHO05D007642 9.8e-36 155.2 375 30.4
TPR.G6104 Trifolium pratense HOM05D006048 ORTHO05D007642 9.8e-36 155.2 376 30.6
Actinidia23630 Actinidia chinensis HOM05D006048 ORTHO05D007642 1.3e-35 154.8 376 31.6
Sc06g0003370 Simmondsia chinensis HOM05D006048 ORTHO05D007642 1.3e-35 154.8 383 30.0
EL10Ac4g09343 Beta vulgaris HOM05D006048 ORTHO05D007642 1.7e-35 154.5 203 35.0
CDE05G2441 Ceratophyllum demersum HOM05D006048 ORTHO05D007642 1.7e-35 154.5 203 39.9
Ciclev10000202m.g Citrus clementina HOM05D006048 ORTHO05D007642 1.7e-35 154.5 375 28.0
CAN.G1077.18 Capsicum annuum HOM05D006048 ORTHO05D007642 2.2e-35 154.1 388 30.4
Lalb_Chr06g0167761 Lupinus albus HOM05D006048 ORTHO05D007642 2.8e-35 153.7 375 27.2
Glyma.20G233200 Glycine max HOM05D006048 ORTHO05D007642 3.7e-35 153.3 201 36.8
VMungo0720G0675 Vigna mungo HOM05D006048 ORTHO05D007642 3.7e-35 153.3 390 27.9
Thecc.05G304700 Theobroma cacao HOM05D006048 ORTHO05D007642 4.8e-35 152.9 389 31.1
Actinidia05707 Actinidia chinensis HOM05D006048 ORTHO05D007642 8.3e-35 152.1 376 31.1
PSO170G0056 Papaver somniferum HOM05D006048 ORTHO05D007642 8.3e-35 152.1 221 37.1
RcHm_v2.0_Chr3g0454571 Rosa chinensis HOM05D006048 ORTHO05D007642 1.1e-34 151.8 378 29.4
Cpa.g.sc48.39 Carica papaya HOM05D006048 ORTHO05D007642 1.4e-34 151.4 201 39.8
AUR62000837 Chenopodium quinoa HOM05D006048 ORTHO05D007642 1.4e-34 151.4 389 29.8
Cc02_g33600 Coffea canephora HOM05D006048 ORTHO05D007642 1.4e-34 151.4 391 27.1
AL1G65400 Arabidopsis lyrata HOM05D006048 ORTHO05D007642 2.4e-34 150.6 200 40.0
FAN02G2040 Fragaria x ananassa HOM05D006048 ORTHO05D007642 2.4e-34 150.6 380 28.4
FAN05G1530 Fragaria x ananassa HOM05D006048 ORTHO05D007642 2.4e-34 150.6 378 29.1
ATR0626G180 Amborella trichopoda HOM05D006048 ORTHO05D007642 4.1e-34 149.8 231 36.4
PSO302G0271 Papaver somniferum HOM05D006048 ORTHO05D007642 4.1e-34 149.8 221 36.7
FvH4_6g05680 Fragaria vesca HOM05D006048 ORTHO05D007642 5.4e-34 149.4 378 29.1
GSVIVG01000040001 Vitis vinifera HOM05D006048 ORTHO05D007642 7.0e-34 149.1 386 30.1
Cfa006579 Carpinus fangiana HOM05D006048 ORTHO05D007642 9.1e-34 148.7 378 29.4
FAN14G2795 Fragaria x ananassa HOM05D006048 ORTHO05D007642 1.2e-33 148.3 378 28.8
FAN14G2991 Fragaria x ananassa HOM05D006048 ORTHO05D007642 1.6e-33 147.9 378 28.8
Phvul.007G180600 Phaseolus vulgaris HOM05D006048 ORTHO05D007642 1.6e-33 147.9 379 27.4
SalBow8G1366 Salvia bowleyana HOM05D006048 ORTHO05D007642 2.0e-33 147.5 219 35.6
Aa31LG2G11800 Aethionema arabicum HOM05D006048 ORTHO05D007642 3.5e-33 146.7 198 39.4
AUR62005136 Chenopodium quinoa HOM05D006048 ORTHO05D007642 3.5e-33 146.7 388 29.9
FAN09G2502 Fragaria x ananassa HOM05D006048 ORTHO05D007642 3.5e-33 146.7 380 28.9
THA.LOC104820894 Tarenaya hassleriana HOM05D006048 ORTHO05D007642 5.9e-33 146.0 219 38.4
C09p24290 Brassica napus HOM05D006048 ORTHO05D007642 7.7e-33 145.6 200 37.0
BolC9t55346H Brassica oleracea HOM05D006048 ORTHO05D007642 7.7e-33 145.6 200 37.0
CARHR284550 Cardamine hirsuta HOM05D006048 ORTHO05D007642 7.7e-33 145.6 200 39.5
Duzib128G0698 Durio zibethinus HOM05D006048 ORTHO05D007642 7.7e-33 145.6 379 31.4
BcaC04g22032 Brassica carinata HOM05D006048 ORTHO05D007642 1.0e-32 145.2 200 37.0
Nn4g26237 Nelumbo nucifera HOM05D006048 ORTHO05D007642 1.0e-32 145.2 390 29.0
TWI12G1173 Tripterygium wilfordii HOM05D006048 ORTHO05D007642 1.0e-32 145.2 383 29.2
Gohir.D11G274400 Gossypium hirsutum HOM05D006048 ORTHO05D007642 2.9e-32 143.7 230 36.5
Gorai.007G296200 Gossypium raimondii HOM05D006048 ORTHO05D007642 5.0e-32 142.9 229 36.2
AT1G54920 Arabidopsis thaliana HOM05D006048 ORTHO05D007642 6.5e-32 142.5 200 38.5
MSTRG.20430 Avicennia marina HOM05D006048 ORTHO05D007642 8.5e-32 142.1 227 37.0
Carub.0002s0845 Capsella rubella HOM05D006048 ORTHO05D007642 8.5e-32 142.1 200 39.0
BcaB07g31106 Brassica carinata HOM05D006048 ORTHO05D007642 1.9e-31 141.0 199 37.7
Migut.B01039 Erythranthe guttata HOM05D006048 ORTHO05D007642 1.9e-31 141.0 379 27.4
Nn1g02208 Nelumbo nucifera HOM05D006048 ORTHO05D007642 2.5e-31 140.6 223 35.9
CsaV3_2G005180 Cucumis sativus L. HOM05D006048 ORTHO05D007642 4.2e-31 139.8 200 39.0
ClCG02G015880 Citrullus lanatus HOM05D006048 ORTHO05D007642 5.5e-31 139.4 200 39.0
TWI56G0330 Tripterygium wilfordii HOM05D006048 ORTHO05D007642 5.5e-31 139.4 382 27.7
Atru.chr2.428 Acer truncatum HOM05D006048 ORTHO05D007642 9.4e-31 138.7 180 36.7
A09p19290 Brassica napus HOM05D006048 ORTHO05D007642 1.2e-30 138.3 304 30.3
Gohir.A11G264200 Gossypium hirsutum HOM05D006048 ORTHO05D007642 1.2e-30 138.3 378 29.4
Oeu017488.1 Olea europaea HOM05D006048 ORTHO05D007642 1.2e-30 138.3 392 29.1
COL.COLO4_13482 Corchorus olitorius HOM05D006048 ORTHO05D007642 1.6e-30 137.9 388 27.8
BraA09t37546Z Brassica rapa HOM05D006048 ORTHO05D007642 3.6e-30 136.7 200 36.0
MELO3C004275.2 Cucumis melo HOM05D006048 ORTHO05D007642 6.1e-30 136.0 200 38.5
MBI19_g16658_MAGBIO Magnolia biondii HOM05D006048 ORTHO05D007642 8.0e-30 135.6 341 31.7
ECA238G0871 Erigeron canadensis HOM05D006048 ORTHO05D007642 1.0e-29 135.2 377 28.4
Sed0020620 Sechium edule HOM05D006048 ORTHO05D007642 3.0e-29 133.7 202 36.6
SGA_v2.0_scaffold172G38965 Striga asiatica HOM05D006048 ORTHO05D007642 3.0e-29 133.7 200 38.0
Lsat_1_v5_gn_2_64861 Lactuca sativa HOM05D006048 ORTHO05D007642 1.3e-27 128.3 201 34.3
Psat6g149640 Pisum sativum HOM05D006048 ORTHO05D007642 3.7e-27 126.7 355 28.7
Psat7g077840 Pisum sativum HOM05D006048 ORTHO05D007642 3.7e-27 126.7 170 37.6
SEGI_14627 Sequoiadendron giganteum HOM05D006048 ORTHO05D007642 6.3e-27 125.9 204 32.8
HanXRQChr15g0463081 Helianthus annuus HOM05D006048 ORTHO05D007642 1.8e-26 124.4 203 33.5
FAN05G2734 Fragaria x ananassa HOM05D006048 ORTHO05D007642 1.3e-24 118.2 346 27.7
Mapoly0011s0030 Marchantia polymorpha HOM05D006048 ORTHO05D007642 1.6e-22 111.3 212 33.0
AagrBONN_evm.TU.Sc2ySwM_344.3982 Anthoceros agrestis HOM05D006048 ORTHO05D007642 1.4e-18 98.2 208 30.8
SMO203G0156 Selaginella moellendorffii HOM05D006048 ORTHO05D007642 2.9e-16 90.5 194 34.0
CDE05G0200 Ceratophyllum demersum HOM05D006048 ORTHO05D007642 7.8e-09 65.9 71 42.3
CiPaw.08G165500 Carya illinoinensis HOM05D006048 ORTHO05D007642 7.3e-07 59.3 71 42.3
MBI19_g40207_MAGBIO Magnolia biondii HOM05D006048 ORTHO05D007642 2.8e-06 57.4 67 41.8


User provided reference genes

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