Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_011207 Vanilla planifolia HOM05D006193 ORTHO05D007808 1.7e-70 269.2 134 100.0
Duzib114G0385 Durio zibethinus HOM05D006193 ORTHO05D007808 1.6e-41 172.9 108 74.1
TAR623G1160 Trochodendron aralioides HOM05D006193 ORTHO05D007808 1.6e-41 172.9 106 74.5
Os03g0288400 Oryza sativa ssp. japonica HOM05D006193 ORTHO05D007808 3.6e-41 171.8 107 71.0
Nn2g10831 Nelumbo nucifera HOM05D006193 ORTHO05D007808 6.1e-41 171.0 108 74.1
Thecc.10G076000 Theobroma cacao HOM05D006193 ORTHO05D007808 1.0e-40 170.2 108 72.2
TAR369G0988 Trochodendron aralioides HOM05D006193 ORTHO05D007808 1.4e-40 169.9 128 62.5
Gohir.D06G175300 Gossypium hirsutum HOM05D006193 ORTHO05D007808 1.8e-40 169.5 106 71.7
Gorai.010G205700 Gossypium raimondii HOM05D006193 ORTHO05D007808 1.8e-40 169.5 106 71.7
PGR044G2737 Punica granatum HOM05D006193 ORTHO05D007808 2.3e-40 169.1 105 74.3
Manes.10G047101 Manihot esculenta HOM05D006193 ORTHO05D007808 1.5e-39 166.4 108 71.3
Atru.chr12.797 Acer truncatum HOM05D006193 ORTHO05D007808 2.6e-39 165.6 108 70.4
Gohir.A06G167900 Gossypium hirsutum HOM05D006193 ORTHO05D007808 3.4e-39 165.2 106 69.8
Ciclev10033053m.g Citrus clementina HOM05D006193 ORTHO05D007808 4.4e-39 164.9 104 74.0
MBI07_g44648_MAGBIO Magnolia biondii HOM05D006193 ORTHO05D007808 4.4e-39 164.9 117 66.7
SalBow4G2149 Salvia bowleyana HOM05D006193 ORTHO05D007808 4.4e-39 164.9 109 69.7
Glyma.20G180500 Glycine max HOM05D006193 ORTHO05D007808 7.5e-39 164.1 103 74.8
Zm00001eb062340 Zea mays HOM05D006193 ORTHO05D007808 7.5e-39 164.1 102 71.6
RcHm_v2.0_Chr1g0363061 Rosa chinensis HOM05D006193 ORTHO05D007808 9.8e-39 163.7 108 70.4
Cfa001656 Carpinus fangiana HOM05D006193 ORTHO05D007808 1.3e-38 163.3 108 68.5
COL.COLO4_28414 Corchorus olitorius HOM05D006193 ORTHO05D007808 1.3e-38 163.3 108 69.4
Haze_16878 Corylus avellana HOM05D006193 ORTHO05D007808 1.3e-38 163.3 108 68.5
HanXRQChr01g0023971 Helianthus annuus HOM05D006193 ORTHO05D007808 2.2e-38 162.5 124 60.5
MSTRG.27474 Avicennia marina HOM05D006193 ORTHO05D007808 2.9e-38 162.2 141 59.6
FvH4_7g19210 Fragaria vesca HOM05D006193 ORTHO05D007808 2.9e-38 162.2 109 67.9
Lj5g0007819 Lotus japonicus HOM05D006193 ORTHO05D007808 2.9e-38 162.2 101 73.3
Cfa001990 Carpinus fangiana HOM05D006193 ORTHO05D007808 3.7e-38 161.8 108 67.6
HanXRQChr08g0229761 Helianthus annuus HOM05D006193 ORTHO05D007808 3.7e-38 161.8 106 69.8
Eucgr.J01081 Eucalyptus grandis HOM05D006193 ORTHO05D007808 4.9e-38 161.4 105 69.5
TWI63G1140 Tripterygium wilfordii HOM05D006193 ORTHO05D007808 6.4e-38 161.0 118 64.4
ECA248G2014 Erigeron canadensis HOM05D006193 ORTHO05D007808 8.3e-38 160.6 106 67.9
Actinidia38857 Actinidia chinensis HOM05D006193 ORTHO05D007808 1.1e-37 160.2 106 67.9
ATR0329G030 Amborella trichopoda HOM05D006193 ORTHO05D007808 1.1e-37 160.2 108 68.5
BcaB04g18121 Brassica carinata HOM05D006193 ORTHO05D007808 1.1e-37 160.2 125 60.8
CAN.G108.21 Capsicum annuum HOM05D006193 ORTHO05D007808 1.1e-37 160.2 106 72.6
CiPaw.02G173400 Carya illinoinensis HOM05D006193 ORTHO05D007808 1.4e-37 159.8 101 73.3
Duzib128G0799 Durio zibethinus HOM05D006193 ORTHO05D007808 1.4e-37 159.8 119 64.7
FAN10G2131 Fragaria x ananassa HOM05D006509 ORTHO05D008144 1.4e-37 159.8 109 67.0
FAN10G3587 Fragaria x ananassa HOM05D006509 ORTHO05D007808 1.4e-37 159.8 109 67.0
Glyma.10G210100 Glycine max HOM05D006193 ORTHO05D007808 1.4e-37 159.8 103 71.8
Prupe.2G212200 Prunus persica HOM05D006193 ORTHO05D007808 1.4e-37 159.8 102 70.6
CANSAT54G0886 Cannabis sativa HOM05D006193 ORTHO05D007808 1.8e-37 159.5 120 65.8
Lsat_1_v5_gn_1_77620 Lactuca sativa HOM05D006193 ORTHO05D007808 1.8e-37 159.5 106 67.0
Solyc03g007490.3 Solanum lycopersicum HOM05D006193 ORTHO05D007808 2.4e-37 159.1 105 72.4
Sopen03g003450 Solanum pennellii HOM05D006193 ORTHO05D007808 2.4e-37 159.1 105 72.4
TPR.G1973 Trifolium pratense HOM05D006193 ORTHO05D007808 3.2e-37 158.7 105 68.6
Lalb_Chr01g0009491 Lupinus albus HOM05D006193 ORTHO05D007808 4.1e-37 158.3 111 64.0
CDE03G0070 Ceratophyllum demersum HOM05D006193 ORTHO05D007808 5.4e-37 157.9 115 61.7
Nitab4.5_0000071g0090 Nicotiana tabacum HOM05D006193 ORTHO05D007808 5.4e-37 157.9 106 70.8
Nitab4.5_0006507g0010 Nicotiana tabacum HOM05D006193 ORTHO05D007808 5.4e-37 157.9 106 70.8
PSO210G4078 Papaver somniferum HOM05D006193 ORTHO05D007808 5.4e-37 157.9 107 67.3
SGA_v2.0_scaffold355G49780 Striga asiatica HOM05D006193 ORTHO05D007808 5.4e-37 157.9 128 58.6
PSO832G3015 Papaver somniferum HOM05D006193 ORTHO05D007808 7.0e-37 157.5 107 67.3
Peaxi162Scf00011g01839 Petunia axillaris HOM05D006193 ORTHO05D007808 7.0e-37 157.5 106 69.8
PGSC0003DMG400009070 Solanum tuberosum HOM05D006193 ORTHO05D007808 9.2e-37 157.1 105 71.4
DCAR_016552 Daucus carota HOM05D006193 ORTHO05D007808 1.2e-36 156.8 108 66.7
VMungo0720G0734 Vigna mungo HOM05D006193 ORTHO05D007808 1.2e-36 156.8 103 69.9
Migut.D01650 Erythranthe guttata HOM05D006193 ORTHO05D007808 1.6e-36 156.4 106 68.9
Migut.F01979 Erythranthe guttata HOM05D006193 ORTHO05D007808 1.6e-36 156.4 106 68.9
Peaxi162Scf00370g00117 Petunia axillaris HOM05D006193 ORTHO05D007808 1.6e-36 156.4 106 68.9
QL08p055470 Quercus lobata HOM05D006193 ORTHO05D007808 1.6e-36 156.4 108 66.7
Phvul.007G095900 Phaseolus vulgaris HOM05D006193 ORTHO05D007808 2.0e-36 156.0 103 68.9
THA.LOC104808680 Tarenaya hassleriana HOM05D006193 ORTHO05D007808 2.7e-36 155.6 103 68.0
Cc02_g11260 Coffea canephora HOM05D006193 ORTHO05D007808 3.5e-36 155.2 106 68.9
Potri.010G223700 Populus trichocarpa HOM05D006193 ORTHO05D007808 3.5e-36 155.2 105 69.5
CSS0007064 Camellia sinensis var. sinensis HOM05D006193 ORTHO05D007808 5.9e-36 154.5 100 72.0
MD01G1107500 Malus domestica HOM05D006193 ORTHO05D007808 1.0e-35 153.7 104 67.3
Aqoxy1G03645 Aquilegia oxysepala HOM05D006193 ORTHO05D007808 1.3e-35 153.3 106 66.0
unitig_37.g12308 Utricularia gibba HOM05D006193 ORTHO05D007808 1.3e-35 153.3 100 67.0
AT4G14145 Arabidopsis thaliana HOM05D006193 ORTHO05D007808 1.7e-35 152.9 126 58.7
Sp7g11980 Schrenkiella parvula HOM05D006193 ORTHO05D007808 2.3e-35 152.5 103 67.0
Hund05693 Selenicereus undatus HOM05D006193 ORTHO05D007808 2.3e-35 152.5 102 73.5
arahy.Tifrunner.gnm1.ann1.4G5N71 Arachis hypogaea HOM05D006193 ORTHO05D007808 2.9e-35 152.1 105 67.6
Sed0026653 Sechium edule HOM05D006193 ORTHO05D007808 2.9e-35 152.1 103 66.0
arahy.Tifrunner.gnm1.ann1.889ECD Arachis hypogaea HOM05D006193 ORTHO05D007808 3.9e-35 151.8 105 67.6
Sed0026413 Sechium edule HOM05D006193 ORTHO05D007808 3.9e-35 151.8 105 62.9
GSVIVG01016260001 Vitis vinifera HOM05D006193 ORTHO05D007808 5.0e-35 151.4 106 64.2
Thhalv10026557m.g Eutrema salsugineum HOM05D006193 ORTHO05D007808 6.6e-35 151.0 103 66.0
BcaC07g37722 Brassica carinata HOM05D006193 ORTHO05D007808 8.6e-35 150.6 100 68.0
A08p10360 Brassica napus HOM05D006193 ORTHO05D007808 8.6e-35 150.6 100 68.0
BolC8t48104H Brassica oleracea HOM05D006193 ORTHO05D007808 8.6e-35 150.6 100 68.0
BraA08t33036Z Brassica rapa HOM05D006193 ORTHO05D007808 8.6e-35 150.6 100 68.0
AL7G42250 Arabidopsis lyrata HOM05D006193 ORTHO05D007808 1.1e-34 150.2 104 64.4
A08p24240 Brassica napus HOM05D006193 ORTHO05D007808 1.5e-34 149.8 121 58.7
BraA08t34379Z Brassica rapa HOM05D006193 ORTHO05D007808 1.5e-34 149.8 120 57.5
CARHR220160 Cardamine hirsuta HOM05D006193 ORTHO05D007808 1.5e-34 149.8 103 65.0
FAN03G1544 Fragaria x ananassa HOM05D006193 ORTHO05D007808 1.9e-34 149.4 129 57.4
Aa31LG9G3240 Aethionema arabicum HOM05D006193 ORTHO05D007808 3.3e-34 148.7 104 65.4
CiPaw.16G031600 Carya illinoinensis HOM05D006193 ORTHO05D007808 3.3e-34 148.7 122 59.0
Carub.0007s2828 Capsella rubella HOM05D006193 ORTHO05D007808 1.2e-33 146.7 101 63.4
Oeu014384.2 Olea europaea HOM05D006193 ORTHO05D007808 1.2e-33 146.7 134 55.2
SGA_v2.0_scaffold250G44987 Striga asiatica HOM05D006193 ORTHO05D007808 2.1e-33 146.0 106 61.3
SGA_v2.0_scaffold24G10658 Striga asiatica HOM05D006193 ORTHO05D007808 8.0e-33 144.1 122 55.7
BcaC01g00219 Brassica carinata HOM05D006193 ORTHO05D007808 1.0e-32 143.7 100 63.0
Oeu042739.1 Olea europaea HOM05D006193 ORTHO05D007808 1.4e-32 143.3 117 59.8
ClCG05G021080 Citrullus lanatus HOM05D006193 ORTHO05D007808 2.6e-31 139.0 132 52.3
Sc20g0001780 Simmondsia chinensis HOM05D006193 ORTHO05D007808 4.4e-31 138.3 131 53.4
Rhsim03G0119300 Rhododendron simsii HOM05D006193 ORTHO05D007808 2.9e-30 135.6 197 40.1
MELO3C012421.2 Cucumis melo HOM05D006193 ORTHO05D007808 3.7e-30 135.2 147 47.6
Sabra10G0173000 Salix brachista HOM05D006193 ORTHO05D007808 8.3e-30 134.0 144 49.3
Aqoxy1G03181 Aquilegia oxysepala HOM05D006193 ORTHO05D007808 1.4e-29 133.3 114 55.3
Ca_10561_v3 Cicer arietinum L. HOM05D006193 ORTHO05D007808 1.3e-27 126.7 82 72.0
Psat6g182760 Pisum sativum HOM05D006193 ORTHO05D007808 3.0e-27 125.6 84 69.0
arahy.Tifrunner.gnm1.ann1.D81QGL Arachis hypogaea HOM05D006193 ORTHO05D007808 7.3e-26 120.9 79 69.6
arahy.Tifrunner.gnm1.ann1.N5AHK9 Arachis hypogaea HOM05D006193 ORTHO05D007808 9.5e-26 120.6 81 67.9
Mapoly0038s0090 Marchantia polymorpha HOM05D006193 ORTHO05D007808 1.2e-25 120.2 110 50.9
EL10Ac7g18239 Beta vulgaris HOM05D006193 ORTHO05D007808 1.8e-24 116.3 102 56.9
FAN19G2294 Fragaria x ananassa HOM05D006193 ORTHO05D007808 6.8e-24 114.4 84 67.9
AUR62001381 Chenopodium quinoa HOM05D006193 ORTHO05D007808 2.2e-22 109.4 75 68.0
Ah.08g217480 Amaranthus hybridus HOM05D006193 ORTHO05D007808 6.4e-22 107.8 99 54.5
MBI07_g30981_MAGBIO Magnolia biondii HOM05D006193 ORTHO05D007808 1.9e-21 106.3 115 50.4
vmacro07063 Vaccinium macrocarpon HOM05D006193 ORTHO05D007808 3.5e-20 102.1 65 75.4
Medtr1g094840 Medicago truncatula HOM05D006193 ORTHO05D007808 1.0e-19 100.5 69 68.1
AagrBONN_evm.TU.Sc2ySwM_228.264 Anthoceros agrestis HOM05D006193 ORTHO05D007808 2.5e-18 95.9 104 47.1
FAN06G3393 Fragaria x ananassa HOM05D006193 ORTHO05D007808 3.3e-18 95.5 65 69.2
Pp3c5_20880 Physcomitrium patens HOM05D006193 ORTHO05D007808 4.3e-18 95.1 104 47.1
CsaV3_5G036210 Cucumis sativus L. HOM05D006193 ORTHO05D007808 1.6e-17 93.2 64 68.8
SMO232G0066 Selaginella moellendorffii HOM05D006193 ORTHO05D007808 8.9e-16 87.4 90 40.0
BolC3t19959H Brassica oleracea HOM05D006193 ORTHO05D007808 1.5e-15 86.7 52 69.2
SMO241G0021 Selaginella moellendorffii HOM05D006193 ORTHO05D007808 8.4e-14 80.9 90 35.6
Lsat_1_v5_gn_2_8120 Lactuca sativa HOM05D006193 ORTHO05D007808 7.1e-13 77.8 94 39.4
Nitab4.5_0005501g0010 Nicotiana tabacum HOM05D006193 ORTHO05D007808 2.1e-12 76.3 85 48.2
EL10Ac7g17093 Beta vulgaris HOM05D006193 ORTHO05D007808 2.7e-12 75.9 65 58.5
Potri.008G038500 Populus trichocarpa HOM05D006193 ORTHO05D007808 7.8e-12 74.3 57 64.9
vmacro07064 Vaccinium macrocarpon HOM05D006193 ORTHO05D007808 2.5e-10 69.3 60 48.3


User provided reference genes

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