Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_011186 Vanilla planifolia HOM05D000561 ORTHO05D008162 2.9e-182 641.7 321 100.0
Nn5g30201 Nelumbo nucifera HOM05D000561 ORTHO05D000514 6.1e-95 351.7 258 67.8
CiPaw.16G047800 Carya illinoinensis HOM05D000561 ORTHO05D008162 1.1e-93 347.4 310 59.4
Atru.chr13.629 Acer truncatum HOM05D000561 ORTHO05D008162 1.5e-93 347.1 311 58.8
Atru.chr13.633 Acer truncatum HOM05D000561 ORTHO05D008162 1.5e-93 347.1 311 58.8
MD08G1106500 Malus domestica HOM05D000561 ORTHO05D008162 2.6e-93 346.3 291 62.2
TAR628G0509 Trochodendron aralioides HOM05D000561 ORTHO05D008162 2.6e-93 346.3 306 60.1
QL02p005893 Quercus lobata HOM05D000561 ORTHO05D008162 4.4e-93 345.5 281 64.1
Hma1.2p1_0260F.1_g104740 Hydrangea macrophylla HOM05D000561 ORTHO05D008162 7.4e-93 344.7 290 61.7
GSVIVG01009559001 Vitis vinifera HOM05D000561 ORTHO05D008162 7.4e-93 344.7 293 61.8
MD15G1087100 Malus domestica HOM05D000561 ORTHO05D008162 1.3e-92 344.0 291 61.9
Duzib116G0222 Durio zibethinus HOM05D000561 ORTHO05D008162 1.7e-92 343.6 299 60.2
CSS0036187 Camellia sinensis var. sinensis HOM05D000561 ORTHO05D008162 4.8e-92 342.0 255 67.1
Prupe.1G440800 Prunus persica HOM05D000561 ORTHO05D008162 8.2e-92 341.3 308 59.1
Potri.014G034700 Populus trichocarpa HOM05D000561 ORTHO05D008162 1.1e-91 340.9 299 59.9
Actinidia22609 Actinidia chinensis HOM05D000561 ORTHO05D008162 1.8e-91 340.1 299 59.9
TAR625G0340 Trochodendron aralioides HOM05D000561 ORTHO05D008162 1.8e-91 340.1 288 62.2
MBI06_g08185_MAGBIO Magnolia biondii HOM05D000561 ORTHO05D008162 3.1e-91 339.3 326 56.4
PSO541G5839 Papaver somniferum HOM05D000561 ORTHO05D008162 7.0e-91 338.2 267 63.7
PSO675G5921 Papaver somniferum HOM05D000561 ORTHO05D008162 7.0e-91 338.2 264 64.0
CDE06G2652 Ceratophyllum demersum HOM05D000561 ORTHO05D008162 1.2e-90 337.4 263 63.9
Ciclev10001965m.g Citrus clementina HOM05D000561 ORTHO05D008162 2.0e-90 336.7 308 60.1
Medtr3g101350 Medicago truncatula HOM05D000561 ORTHO05D008162 2.0e-90 336.7 308 58.1
vmacro21557 Vaccinium macrocarpon HOM05D000561 ORTHO05D008162 4.5e-90 335.5 298 60.7
ClCG08G015630 Citrullus lanatus HOM05D000561 ORTHO05D008162 1.3e-89 334.0 297 59.6
Dinv39338 Davidia involucrata HOM05D000561 ORTHO05D008162 1.3e-89 334.0 268 62.7
RcHm_v2.0_Chr6g0307161 Rosa chinensis HOM05D000561 ORTHO05D008162 1.3e-89 334.0 285 60.7
TWI56G0230 Tripterygium wilfordii HOM05D000561 ORTHO05D008162 2.2e-89 333.2 301 60.5
arahy.Tifrunner.gnm1.ann1.YYC1CT Arachis hypogaea HOM05D000561 ORTHO05D008162 6.5e-89 331.6 290 61.0
CsaV3_2G028140 Cucumis sativus L. HOM05D000561 ORTHO05D008162 8.5e-89 331.3 252 66.7
Lalb_Chr08g0245641 Lupinus albus HOM05D000561 ORTHO05D008162 2.5e-88 329.7 312 57.1
Lj1g0015016 Lotus japonicus HOM05D000561 ORTHO05D008162 4.2e-88 328.9 260 64.2
Sed0001510 Sechium edule HOM05D000561 ORTHO05D008162 4.2e-88 328.9 274 61.7
Psat5g044440 Pisum sativum HOM05D000561 ORTHO05D008162 1.6e-87 327.0 308 57.8
Os03g0186100 Oryza sativa ssp. japonica HOM05D000561 ORTHO05D008162 2.1e-87 326.6 277 61.0
Zm00001eb006450 Zea mays HOM05D000561 ORTHO05D008162 2.1e-87 326.6 288 57.3
Aqoxy6G01386 Aquilegia oxysepala HOM05D000561 ORTHO05D008162 2.7e-87 326.2 253 64.8
DCAR_019467 Daucus carota HOM05D000561 ORTHO05D008162 2.7e-87 326.2 301 57.5
MELO3C010892.2 Cucumis melo HOM05D000561 ORTHO05D008162 4.7e-87 325.5 300 59.3
Manes.05G170800 Manihot esculenta HOM05D000561 ORTHO05D008162 4.7e-87 325.5 306 57.2
TPR.G10521 Trifolium pratense HOM05D000561 ORTHO05D008162 4.7e-87 325.5 295 58.0
Gohir.D05G203500 Gossypium hirsutum HOM05D000561 ORTHO05D008162 1.0e-86 324.3 313 56.9
Phvul.009G063100 Phaseolus vulgaris HOM05D000561 ORTHO05D008162 1.0e-86 324.3 303 58.4
Sabra14G0024600 Salix brachista HOM05D000561 ORTHO05D008162 1.4e-86 323.9 297 60.9
Cc10_g03990 Coffea canephora HOM05D000561 ORTHO05D008162 1.8e-86 323.6 267 59.9
CARHR050650 Cardamine hirsuta HOM05D000561 ORTHO05D008162 3.0e-86 322.8 298 56.7
Haze_17567 Corylus avellana HOM05D000561 ORTHO05D008162 5.2e-86 322.0 306 59.2
Carub.0003s2738 Capsella rubella HOM05D000561 ORTHO05D008162 8.8e-86 321.2 257 61.9
Duzib093G1567 Durio zibethinus HOM05D000561 ORTHO05D008162 2.6e-85 319.7 256 61.7
Rhsim06G0046600 Rhododendron simsii HOM05D000561 ORTHO05D008162 2.6e-85 319.7 309 57.3
Aa31LG10G9880 Aethionema arabicum HOM05D000561 ORTHO05D008162 4.4e-85 318.9 312 56.4
ECA232G0584 Erigeron canadensis HOM05D000561 ORTHO05D008162 4.4e-85 318.9 294 57.1
Glyma.06G037300 Glycine max HOM05D000561 ORTHO05D008162 4.4e-85 318.9 255 64.3
AL4G19400 Arabidopsis lyrata HOM05D000561 ORTHO05D008162 5.7e-85 318.5 273 59.0
Gorai.009G209500 Gossypium raimondii HOM05D000561 ORTHO05D008162 9.7e-85 317.8 314 56.4
CAN.G371.47 Capsicum annuum HOM05D000561 ORTHO05D008162 1.3e-84 317.4 258 61.6
MSTRG.1332 Avicennia marina HOM05D000561 ORTHO05D008162 2.8e-84 316.2 308 53.9
Thecc.08G013400 Theobroma cacao HOM05D000561 ORTHO05D008162 3.7e-84 315.8 249 63.5
FAN27G1876 Fragaria x ananassa HOM05D000561 ORTHO05D008162 1.4e-83 313.9 274 60.2
Gohir.A05G200200 Gossypium hirsutum HOM05D000561 ORTHO05D008162 1.8e-83 313.5 313 55.6
Migut.C00604 Erythranthe guttata HOM05D000561 ORTHO05D008162 2.4e-83 313.2 302 55.0
Nitab4.5_0005549g0040 Nicotiana tabacum HOM05D000561 ORTHO05D008162 2.4e-83 313.2 249 62.2
THA.LOC104803685 Tarenaya hassleriana HOM05D000561 ORTHO05D008162 2.4e-83 313.2 260 58.5
AT2G26540 Arabidopsis thaliana HOM05D000561 ORTHO05D008162 4.1e-83 312.4 320 52.2
Solyc04g079320.4 Solanum lycopersicum HOM05D000561 ORTHO05D008162 7.0e-83 311.6 258 60.9
Sopen04g032930 Solanum pennellii HOM05D000561 ORTHO05D008162 7.0e-83 311.6 258 60.9
Nitab4.5_0000068g0440 Nicotiana tabacum HOM05D000561 ORTHO05D008162 9.1e-83 311.2 266 59.4
COL.COLO4_26457 Corchorus olitorius HOM05D000561 ORTHO05D008162 1.2e-82 310.8 236 64.8
FvH4_2g34880 Fragaria vesca HOM05D000561 ORTHO05D008162 1.6e-82 310.5 275 61.1
HanXRQChr02g0038741 Helianthus annuus HOM05D000561 ORTHO05D008162 1.6e-82 310.5 278 56.8
Sp4g07760 Schrenkiella parvula HOM05D000561 ORTHO05D008162 1.0e-81 307.8 322 51.9
Ca_15966_v3 Cicer arietinum L. HOM05D000561 ORTHO05D008162 1.7e-81 307.0 263 61.2
A09p55150 Brassica napus HOM05D000561 ORTHO05D008162 2.9e-81 306.2 310 52.9
HanXRQChr09g0268001 Helianthus annuus HOM05D000561 ORTHO05D008162 2.9e-81 306.2 310 54.5
BraA09t40923Z Brassica rapa HOM05D000561 ORTHO05D008162 1.1e-80 304.3 310 52.9
Lsat_1_v5_gn_4_124200 Lactuca sativa HOM05D000561 ORTHO05D008162 1.1e-80 304.3 312 54.8
C08p38080 Brassica napus HOM05D000561 ORTHO05D008162 1.5e-80 303.9 262 57.6
Manes.18G034000 Manihot esculenta HOM05D000561 ORTHO05D008162 1.5e-80 303.9 293 57.0
BcaB08g35302 Brassica carinata HOM05D000561 ORTHO05D008162 1.9e-80 303.5 310 51.6
BolC8t51383H Brassica oleracea HOM05D000561 ORTHO05D008162 2.5e-80 303.1 260 57.7
Sabra02G0100300 Salix brachista HOM05D000561 ORTHO05D008162 3.2e-80 302.8 284 59.5
Eucgr.F02370 Eucalyptus grandis HOM05D000561 ORTHO05D008162 9.4e-80 301.2 232 65.5
PGR031G3300 Punica granatum HOM05D000561 ORTHO05D008162 2.1e-79 300.1 266 59.0
SGA_v2.0_scaffold71G24043 Striga asiatica HOM05D000561 ORTHO05D008162 1.4e-78 297.4 269 56.9
Lsat_1_v5_gn_1_20480 Lactuca sativa HOM05D000561 ORTHO05D008162 2.3e-78 296.6 293 55.3
Peaxi162Scf00566g00219 Petunia axillaris HOM05D000561 ORTHO05D008162 4.0e-78 295.8 244 61.5
EL10Ac1g01805 Beta vulgaris HOM05D000561 ORTHO05D008162 8.8e-78 294.7 292 55.5
SalBow7G2378 Salvia bowleyana HOM05D000561 ORTHO05D008162 1.2e-77 294.3 341 48.7
ATR0087G004 Amborella trichopoda HOM05D000561 ORTHO05D008162 1.5e-77 293.9 234 62.8
Thhalv10001252m.g Eutrema salsugineum HOM05D000561 ORTHO05D008162 1.7e-76 290.4 257 57.6
BcaC07g40815 Brassica carinata HOM05D000561 ORTHO05D008162 3.7e-76 289.3 310 51.0
Migut.O00512 Erythranthe guttata HOM05D000561 ORTHO05D008162 4.1e-75 285.8 302 48.7
FAN20G2490 Fragaria x ananassa HOM05D000561 ORTHO05D008162 1.2e-71 274.2 355 46.5
Hund26617 Selenicereus undatus HOM05D000561 ORTHO05D008162 3.0e-70 269.6 387 41.6
VMungo1309G1588 Vigna mungo HOM05D000561 ORTHO05D008162 4.4e-69 265.8 240 58.8
Lj4A51T47 Lonicera japonica HOM05D000561 ORTHO05D008162 2.9e-65 253.1 195 64.1
Pp3c9_18350 Physcomitrium patens HOM05D000561 ORTHO05D008162 1.1e-64 251.1 259 48.6
Ah.06g192790 Amaranthus hybridus HOM05D000561 ORTHO05D008162 2.5e-64 250.0 293 49.5
AagrBONN_evm.TU.Sc2ySwM_228.1283 Anthoceros agrestis HOM05D000561 ORTHO05D008162 5.5e-64 248.8 250 50.4
Glyma.04G037000 Glycine max HOM05D000561 ORTHO05D008162 1.2e-63 247.7 248 57.3
AUR62022458 Chenopodium quinoa HOM05D000561 ORTHO05D008162 2.8e-63 246.5 259 56.0
Cpa.g.sc64.2 Carica papaya HOM05D000561 ORTHO05D008162 8.0e-63 245.0 195 62.1
Mapoly0101s0072 Marchantia polymorpha HOM05D000561 ORTHO05D008162 1.5e-61 240.7 260 49.2
SMO367G0032 Selaginella moellendorffii HOM05D000561 ORTHO05D008162 1.7e-60 237.3 245 48.6
SEGI_40608 Sequoiadendron giganteum HOM05D000561 ORTHO05D008162 2.2e-60 236.9 242 50.4
Carub.0004s0671 Capsella rubella HOM05D000561 ORTHO05D008162 7.0e-59 231.9 309 46.9
SHI08313 Sapria himalayana HOM05D000561 ORTHO05D008162 2.0e-58 230.3 260 49.2
AUR62040067 Chenopodium quinoa HOM05D000561 ORTHO05D008162 1.0e-57 228.0 318 46.5
ECA247G1201 Erigeron canadensis HOM05D000561 ORTHO05D000514 1.9e-56 223.8 203 54.2
Sc26g0003980 Simmondsia chinensis HOM05D000561 ORTHO05D008162 1.4e-54 217.6 223 57.4
CBR_g12178 Chara braunii HOM05D000561 ORTHO05D008162 4.4e-53 212.6 269 41.6
Cre09.g409100 Chlamydomonas reinhardtii HOM05D000561 ORTHO05D008162 1.6e-50 204.1 289 39.8
CDE10G0258 Ceratophyllum demersum HOM05D000561 ORTHO05D008162 1.4e-46 191.0 169 56.8
arahy.Tifrunner.gnm1.ann1.96H4RR Arachis hypogaea HOM05D000561 ORTHO05D008162 8.9e-46 188.3 175 60.0
unitig_32.g11128 Utricularia gibba HOM05D000561 ORTHO05D008162 3.7e-44 183.0 136 64.0
Migut.N02692 Erythranthe guttata HOM05D000561 ORTHO05D008162 5.4e-43 179.1 211 49.8
MCO15G161 Micromonas commoda HOM05D000561 ORTHO05D008162 3.9e-41 172.9 253 40.3
PRCOL_00005348 Prasinoderma coloniale HOM05D000561 ORTHO05D008162 6.8e-38 162.2 256 38.3
Lsat_1_v5_gn_2_45600 Lactuca sativa HOM05D000561 ORTHO05D008162 2.7e-34 150.2 214 40.2
SGA_v2.0_scaffold217G42442 Striga asiatica HOM05D000561 ORTHO05D008162 8.1e-31 138.7 127 55.9
Lsat_1_v5_gn_5_145360 Lactuca sativa HOM05D000561 ORTHO05D008162 3.6e-23 113.2 122 48.4
SGA_v2.0_scaffold217G42441 Striga asiatica HOM05D000561 ORTHO05D008162 7.6e-21 105.5 79 58.2
Lsat_1_v5_gn_5_39421 Lactuca sativa HOM05D000487 ORTHO05D048384 4.3e-16 89.7 82 50.0


User provided reference genes

Program Settings