Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_011144 Vanilla planifolia HOM05D007155 ORTHO05D003034 4.3e-75 285.8 340 100.0
Os06g0499301 Oryza sativa ssp. japonica HOM05D007155 ORTHO05D003034 1.7e-26 124.4 125 46.4
Zm00001eb064820 Zea mays HOM05D007155 ORTHO05D003034 5.4e-25 119.4 121 44.6
BcaNung06194 Brassica carinata HOM05D007155 ORTHO05D003034 1.7e-18 97.8 105 42.9
Carub.0007s2104 Capsella rubella HOM05D007155 ORTHO05D003034 2.9e-18 97.1 123 37.4
Aa31LG6G2510 Aethionema arabicum HOM05D007155 ORTHO05D003034 1.1e-17 95.1 106 42.5
A01p11870 Brassica napus HOM05D007155 ORTHO05D003034 1.1e-17 95.1 104 42.3
VMungo1309G1642 Vigna mungo HOM05D007155 ORTHO05D003034 2.4e-17 94.0 124 33.1
C01p14070 Brassica napus HOM05D007155 ORTHO05D003034 3.2e-17 93.6 104 40.4
BraA01t01129Z Brassica rapa HOM05D007155 ORTHO05D003034 3.2e-17 93.6 104 40.4
BolC1t01374H Brassica oleracea HOM05D007155 ORTHO05D003034 4.1e-17 93.2 104 40.4
Thhalv10010168m.g Eutrema salsugineum HOM05D007155 ORTHO05D003034 4.1e-17 93.2 104 41.3
Lj6g0001159 Lotus japonicus HOM05D007155 ORTHO05D003034 5.4e-17 92.8 128 35.2
Sp7g18540 Schrenkiella parvula HOM05D007155 ORTHO05D003034 5.4e-17 92.8 104 41.3
CARHR226930 Cardamine hirsuta HOM05D007155 ORTHO05D003034 7.0e-17 92.4 104 40.4
Prupe.4G118800 Prunus persica HOM05D007155 ORTHO05D003034 1.6e-16 91.3 111 41.4
DCAR_001266 Daucus carota HOM05D007155 ORTHO05D003034 1.3e-15 88.2 93 43.0
AL7G33760 Arabidopsis lyrata HOM05D007155 ORTHO05D003034 1.7e-15 87.8 104 39.4
THA.LOC104811820 Tarenaya hassleriana HOM05D007155 ORTHO05D003034 1.7e-15 87.8 101 39.6
Ca_01983_v3 Cicer arietinum L. HOM05D007155 ORTHO05D003034 5.0e-15 86.3 122 32.8
TPR.G29692 Trifolium pratense HOM05D007155 ORTHO05D003034 5.0e-15 86.3 101 41.6
MD10G1226600 Malus domestica HOM05D007155 ORTHO05D003034 6.6e-15 85.9 98 39.8
Lj2P342T43 Lonicera japonica HOM05D007155 ORTHO05D003034 8.6e-15 85.5 92 42.4
Psat1g150440 Pisum sativum HOM05D007155 ORTHO05D003034 1.1e-14 85.1 101 41.6
AT4G20090 Arabidopsis thaliana HOM05D007155 ORTHO05D003034 1.9e-14 84.3 99 40.4
QL10p022098 Quercus lobata HOM05D007155 ORTHO05D003034 1.9e-14 84.3 92 41.3
RcHm_v2.0_Chr5g0021261 Rosa chinensis HOM05D007155 ORTHO05D003034 2.5e-14 84.0 92 45.7
EL10Ac7g17660 Beta vulgaris HOM05D007155 ORTHO05D003034 3.3e-14 83.6 120 33.3
PSO210G6432 Papaver somniferum HOM05D007155 ORTHO05D003034 3.3e-14 83.6 92 44.6
Dinv26303 Davidia involucrata HOM05D007155 ORTHO05D003034 5.6e-14 82.8 92 40.2
Gohir.A05G245700 Gossypium hirsutum HOM05D007155 ORTHO05D003034 5.6e-14 82.8 93 43.0
HanXRQChr01g0005921 Helianthus annuus HOM05D007155 ORTHO05D003034 7.3e-14 82.4 89 38.2
PSO832G3824 Papaver somniferum HOM05D007155 ORTHO05D003034 7.3e-14 82.4 92 43.5
PGR142G0445 Punica granatum HOM05D007155 ORTHO05D003034 9.5e-14 82.0 94 41.5
Atru.chr10.291 Acer truncatum HOM05D007155 ORTHO05D003034 1.2e-13 81.6 93 41.9
Gohir.D05G247200 Gossypium hirsutum HOM05D007155 ORTHO05D003034 1.2e-13 81.6 93 41.9
Gorai.009G258000 Gossypium raimondii HOM05D007155 ORTHO05D003034 1.2e-13 81.6 93 43.0
Sabra03G0112000 Salix brachista HOM05D007155 ORTHO05D003034 1.2e-13 81.6 89 47.2
Nn1g07043 Nelumbo nucifera HOM05D007155 ORTHO05D003034 1.6e-13 81.3 95 40.0
GSVIVG01012156001 Vitis vinifera HOM05D007155 ORTHO05D003034 1.6e-13 81.3 92 42.4
Oeu046920.2 Olea europaea HOM05D007155 ORTHO05D003034 3.6e-13 80.1 93 37.6
CiPaw.09G138700 Carya illinoinensis HOM05D007155 ORTHO05D003034 6.2e-13 79.3 93 37.6
Manes.09G079638 Manihot esculenta HOM05D007155 ORTHO05D003034 6.2e-13 79.3 92 41.3
Potri.003G154800 Populus trichocarpa HOM05D007155 ORTHO05D003034 6.2e-13 79.3 89 44.9
Sc17g0004280 Simmondsia chinensis HOM05D007155 ORTHO05D003034 8.1e-13 79.0 98 38.8
Lalb_Chr02g0154101 Lupinus albus HOM05D007155 ORTHO05D003034 1.1e-12 78.6 94 40.4
FAN11G2573 Fragaria x ananassa HOM05D007155 ORTHO05D003034 1.8e-12 77.8 92 44.6
Manes.13G075956 Manihot esculenta HOM05D007155 ORTHO05D003034 1.8e-12 77.8 92 40.2
Cfa001139 Carpinus fangiana HOM05D007155 ORTHO05D003034 2.3e-12 77.4 91 38.5
Rhsim10G0011200 Rhododendron simsii HOM05D007155 ORTHO05D003034 2.3e-12 77.4 95 40.0
Lsat_1_v5_gn_5_153261 Lactuca sativa HOM05D007155 ORTHO05D003034 3.1e-12 77.0 91 38.5
FvH4_3g13070 Fragaria vesca HOM05D007155 ORTHO05D003034 4.0e-12 76.6 92 43.5
FAN21G1032 Fragaria x ananassa HOM05D007155 ORTHO05D003034 4.0e-12 76.6 112 38.4
SHI28075 Sapria himalayana HOM05D007155 ORTHO05D003034 4.0e-12 76.6 93 36.6
Ciclev10014519m.g Citrus clementina HOM05D007155 ORTHO05D003034 5.2e-12 76.3 93 35.5
Phvul.009G243700 Phaseolus vulgaris HOM05D007155 ORTHO05D003034 5.2e-12 76.3 92 37.0
MSTRG.22516 Avicennia marina HOM05D007155 ORTHO05D003034 6.8e-12 75.9 92 39.1
Thecc.02G002900 Theobroma cacao HOM05D007155 ORTHO05D003034 8.9e-12 75.5 91 38.5
Actinidia34693 Actinidia chinensis HOM05D007155 ORTHO05D003034 1.5e-11 74.7 93 38.7
Haze_05252 Corylus avellana HOM05D007155 ORTHO05D003034 1.5e-11 74.7 91 37.4
Glyma.09G050500 Glycine max HOM05D007155 ORTHO05D003034 2.0e-11 74.3 90 37.8
CSS0001449 Camellia sinensis var. sinensis HOM05D007155 ORTHO05D003034 2.6e-11 73.9 92 39.1
CSS0034942 Camellia sinensis var. sinensis HOM05D007155 ORTHO05D003034 2.6e-11 73.9 92 39.1
Lalb_Chr15g0083741 Lupinus albus HOM05D007155 ORTHO05D003034 2.6e-11 73.9 91 37.4
Potri.001G075900 Populus trichocarpa HOM05D007155 ORTHO05D003034 2.6e-11 73.9 85 43.5
Duzib132G0118 Durio zibethinus HOM05D007155 ORTHO05D003034 3.4e-11 73.6 91 37.4
Nitab4.5_0010610g0010 Nicotiana tabacum HOM05D007155 ORTHO05D003034 3.4e-11 73.6 91 36.3
CANSAT35G0897 Cannabis sativa HOM05D007155 ORTHO05D003034 4.4e-11 73.2 83 38.6
FAN25G3588 Fragaria x ananassa HOM05D007155 ORTHO05D003034 4.4e-11 73.2 88 43.2
TAR624G1337 Trochodendron aralioides HOM05D007155 ORTHO05D003034 4.4e-11 73.2 79 44.3
Sed0006212 Sechium edule HOM05D007155 ORTHO05D003034 5.8e-11 72.8 89 47.2
CsaV3_2G014420 Cucumis sativus L. HOM05D007155 ORTHO05D003034 7.5e-11 72.4 98 35.7
Eucgr.D00014 Eucalyptus grandis HOM05D007155 ORTHO05D003034 7.5e-11 72.4 91 36.3
SalBow7G4478 Salvia bowleyana HOM05D007155 ORTHO05D003034 7.5e-11 72.4 92 33.7
Zm00001eb023980 Zea mays HOM05D007155 ORTHO05D003034 9.8e-11 72.0 60 55.0
Medtr2g035450 Medicago truncatula HOM05D007155 ORTHO05D003034 1.3e-10 71.6 82 43.9
ECA233G0666 Erigeron canadensis HOM05D007155 ORTHO05D003034 1.7e-10 71.2 94 34.0
CANSAT21G2211 Cannabis sativa HOM05D007155 ORTHO05D003034 2.2e-10 70.9 84 38.1
Nitab4.5_0000844g0300 Nicotiana tabacum HOM05D007155 ORTHO05D003034 2.9e-10 70.5 88 37.5
Aqoxy1G03675 Aquilegia oxysepala HOM05D007155 ORTHO05D003034 3.7e-10 70.1 85 38.8
CAN.G809.50 Capsicum annuum HOM05D007155 ORTHO05D003034 3.7e-10 70.1 88 36.4
FAN16G0835 Fragaria x ananassa HOM05D007155 ORTHO05D003034 6.4e-10 69.3 86 44.2
vmacro11017 Vaccinium macrocarpon HOM05D007155 ORTHO05D003034 6.4e-10 69.3 93 34.4
Peaxi162Scf00036g00084 Petunia axillaris HOM05D007155 ORTHO05D003034 1.1e-09 68.6 88 36.4
SGA_v2.0_scaffold341G49370 Striga asiatica HOM05D007155 ORTHO05D002534 2.4e-09 67.4 92 32.6
Cc09_g05030 Coffea canephora HOM05D007155 ORTHO05D003034 9.2e-09 65.5 92 33.7
ClCG01G025760 Citrullus lanatus HOM05D007155 ORTHO05D003034 1.6e-08 64.7 95 33.7
PGSC0003DMG400007329 Solanum tuberosum HOM05D007155 ORTHO05D003034 2.1e-08 64.3 88 35.2
Sopen02g026480 Solanum pennellii HOM05D007155 ORTHO05D003034 2.7e-08 63.9 90 35.6
Solyc02g081860.3 Solanum lycopersicum HOM05D007155 ORTHO05D003034 3.5e-08 63.5 87 33.3
Sed0017393 Sechium edule HOM05D007155 ORTHO05D003034 4.6e-08 63.2 89 32.6
Ah.15g092760 Amaranthus hybridus HOM05D007155 ORTHO05D003034 6.0e-08 62.8 92 34.8
Dinv24770 Davidia involucrata HOM05D003210 ORTHO05D000001 6.0e-08 62.8 122 33.6
Hund12398 Selenicereus undatus HOM05D007155 ORTHO05D003034 9.5e-06 55.5 81 33.3


User provided reference genes

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